Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P35030_001 | Banana | nucleus | 46.83 | 47.45 |
| GSMUA_Achr9P09240_001 | Banana | nucleus | 26.31 | 46.53 |
| GSMUA_Achr9P09250_001 | Banana | endoplasmic reticulum, golgi | 18.84 | 31.46 |
| Zm00001d013757_P010 | Maize | nucleus | 37.31 | 30.63 |
| EER91265 | Sorghum | nucleus | 36.57 | 30.39 |
| Os03t0596900-01 | Rice | nucleus | 38.06 | 29.02 |
| Zm00001d033159_P001 | Maize | nucleus | 23.51 | 28.19 |
| GSMUA_Achr11P... | Banana | nucleus | 27.43 | 26.97 |
| GSMUA_Achr10P... | Banana | nucleus | 26.12 | 25.18 |
| TraesCS4A01G137900.1 | Wheat | nucleus | 36.01 | 19.73 |
| TraesCS4B01G148100.1 | Wheat | nucleus | 35.63 | 19.65 |
| HORVU4Hr1G035250.1 | Barley | nucleus | 35.63 | 19.27 |
| TraesCS4D01G153300.1 | Wheat | nucleus | 35.63 | 19.06 |
| OQU91413 | Sorghum | nucleus | 30.6 | 12.14 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P23560_001 | EnsemblPlants:GSMUA_Achr4T23560_001 | EnsemblPlantsGene:GSMUA_Achr4G23560_001 | Gene3D:1.10.10.60 | InterPro:DEK_C | ncoils:Coil |
| PANTHER:PTHR13468 | PANTHER:PTHR13468:SF8 | PFAM:PF08766 | SEG:seg | SUPFAM:SSF109715 | UniParc:UPI000296F179 |
| UniProt:M0SRG7 | MapMan:35.2 | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G23560_001]
Coordinates
chr4:-:23598096..23605690
Molecular Weight (calculated)
60857.2 Da
IEP (calculated)
5.515
GRAVY (calculated)
-1.201
Length
536 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKVEVKENG DKKNEGKEVI DALENEDGQQ TDITNLENVG SEKEYTENVN TVEPEDVKMV DAEHVKADAV DVKMVDAEDV KDEEKGGETA MKLLASPGSS
101: IERPVRERKT VERLVEVIEK EPNKEFQVEK GRGTPLKDIP NVAHKLARKR PADIKLIHQT LFGRKGKAVN FKSHILQFSG FVWHESDEKQ RAKMKEKLDK
201: YVKDTLLDLC DLFDLSVSRA NSRKEDLVTK LLDFLVAPHS TTDSVHAEDQ KSRKRKRMDR GSASKRRGVL TKHPEKWIKS EETAATKESS AQETEDEEED
301: EKVVDVHSEE KVRKHSESEA KETESGEDED EDEDDDDVDE YDEKKLGKGK PDKRKVGRRQ GSVAKEKLKV GTSPKKSSLP MTTNSPAKRS FSKRSKAEED
401: NDASMKVFVS KKRNLGSPKK KSTPKSNTKE KTTDKKTARG KPRRLEVEQP TKEELRNKIC EILKEVDFNT ATFTDILKQL AAYYKMDLTP RKASLKLMIQ
501: EELTKLAEED EEDEDEDDDD AEKEGKPESK GKAVEA
101: IERPVRERKT VERLVEVIEK EPNKEFQVEK GRGTPLKDIP NVAHKLARKR PADIKLIHQT LFGRKGKAVN FKSHILQFSG FVWHESDEKQ RAKMKEKLDK
201: YVKDTLLDLC DLFDLSVSRA NSRKEDLVTK LLDFLVAPHS TTDSVHAEDQ KSRKRKRMDR GSASKRRGVL TKHPEKWIKS EETAATKESS AQETEDEEED
301: EKVVDVHSEE KVRKHSESEA KETESGEDED EDEDDDDVDE YDEKKLGKGK PDKRKVGRRQ GSVAKEKLKV GTSPKKSSLP MTTNSPAKRS FSKRSKAEED
401: NDASMKVFVS KKRNLGSPKK KSTPKSNTKE KTTDKKTARG KPRRLEVEQP TKEELRNKIC EILKEVDFNT ATFTDILKQL AAYYKMDLTP RKASLKLMIQ
501: EELTKLAEED EEDEDEDDDD AEKEGKPESK GKAVEA
001: MGEEDTKVIV EPTANGTSSL QKTSDAISGK EVQENASGKE VQESKKEEDT GLEKMEIDDE GKQHEGESET GDKEVEVTEE EKKDVGEDKE QPEADKMDED
101: TDDKNLKADD GVSGVATEED AVMKESVESA DNKDAENPEG EQEKESKEEK LEGGKANGNE EGDTEEKLVG GDKGDDVDEA EKVENVDEDD KEEALKEKNE
201: AELAEEEETN KGEEVKEANK EDDVEADTKV AEPEVEDKKT ESKDENEDKE EEKEDEKEES MDDKEDEKEE SNDDDKEDEK EESNDDKEDK KEDIKKSNKR
301: GKGKTEKTRG KTKSDEEKKD IEPKTPFFSD RPVRERKSVE RLVAVVDKDS SREFHVEKGK GTPLKDIPNV AYKVSRKKSD EVFKQLHTIL FGGKRVKATQ
401: LKAHILRFSG YKWQGDEEKA KLKVKEKFEK INKEKLLEFC DLFDISVAKA TTKKEDIVTK LVEFLEKPHA TTDVLVNEKE KGVKRKRTPK KSSPAAGSSS
501: SKRSAKSQKK TEEATRTNKK SVAHSDDESE EEKEDDEEEE KEQEVEEEEE ENENGIPDKS EDEAPQLSES EENVESEEES EEETKKKKRG SRTSSDKKES
601: AGKSRSKKTA VPTKSSPPKK ATQKRSAGKR KKSDDDSDTS PKASSKRKKT EKPAKEQAAA PLKSVSKEKP VIGKRGGKGK DKNKEPSDEE LKTAIIDILK
701: GVDFNTATFT DILKRLDAKF NISLASKKSS IKRMIQDELT KLADEAEDEE GEEEDAEHEE EEEKEKAKGS GGGEEVKA
101: TDDKNLKADD GVSGVATEED AVMKESVESA DNKDAENPEG EQEKESKEEK LEGGKANGNE EGDTEEKLVG GDKGDDVDEA EKVENVDEDD KEEALKEKNE
201: AELAEEEETN KGEEVKEANK EDDVEADTKV AEPEVEDKKT ESKDENEDKE EEKEDEKEES MDDKEDEKEE SNDDDKEDEK EESNDDKEDK KEDIKKSNKR
301: GKGKTEKTRG KTKSDEEKKD IEPKTPFFSD RPVRERKSVE RLVAVVDKDS SREFHVEKGK GTPLKDIPNV AYKVSRKKSD EVFKQLHTIL FGGKRVKATQ
401: LKAHILRFSG YKWQGDEEKA KLKVKEKFEK INKEKLLEFC DLFDISVAKA TTKKEDIVTK LVEFLEKPHA TTDVLVNEKE KGVKRKRTPK KSSPAAGSSS
501: SKRSAKSQKK TEEATRTNKK SVAHSDDESE EEKEDDEEEE KEQEVEEEEE ENENGIPDKS EDEAPQLSES EENVESEEES EEETKKKKRG SRTSSDKKES
601: AGKSRSKKTA VPTKSSPPKK ATQKRSAGKR KKSDDDSDTS PKASSKRKKT EKPAKEQAAA PLKSVSKEKP VIGKRGGKGK DKNKEPSDEE LKTAIIDILK
701: GVDFNTATFT DILKRLDAKF NISLASKKSS IKRMIQDELT KLADEAEDEE GEEEDAEHEE EEEKEKAKGS GGGEEVKA
Arabidopsis Description
DEK domain-containing chromatin associated protein [Source:UniProtKB/TrEMBL;Acc:F4K4Y5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.