Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER91265 | Sorghum | nucleus | 78.56 | 79.53 |
| Zm00001d033159_P001 | Maize | nucleus | 47.17 | 68.9 |
| Os03t0596900-01 | Rice | nucleus | 53.29 | 49.5 |
| GSMUA_Achr9P09240_001 | Banana | nucleus | 18.53 | 39.93 |
| GSMUA_Achr6P35030_001 | Banana | nucleus | 31.24 | 38.56 |
| GSMUA_Achr4P23560_001 | Banana | nucleus | 30.63 | 37.31 |
| PGSC0003DMT400037344 | Potato | endoplasmic reticulum, vacuole | 18.68 | 35.06 |
| TraesCS4B01G148100.1 | Wheat | nucleus | 51.0 | 34.26 |
| TraesCS4D01G153300.1 | Wheat | nucleus | 51.15 | 33.33 |
| HORVU4Hr1G035250.1 | Barley | nucleus | 50.54 | 33.3 |
| TraesCS4A01G137900.1 | Wheat | nucleus | 48.85 | 32.62 |
| Solyc10g006000.2.1 | Tomato | nucleus | 27.26 | 32.13 |
| VIT_19s0015g00430.t01 | Wine grape | nucleus | 28.02 | 30.55 |
| Solyc07g065490.2.1 | Tomato | nucleus | 27.87 | 28.71 |
| Bra027748.1-P | Field mustard | nucleus | 7.66 | 28.41 |
| CDX94304 | Canola | nucleus | 18.38 | 27.46 |
| PGSC0003DMT400057390 | Potato | extracellular, nucleus | 28.64 | 27.38 |
| KRH46360 | Soybean | nucleus | 30.47 | 26.89 |
| KRG98507 | Soybean | nucleus | 29.56 | 26.26 |
| CDY06563 | Canola | nucleus | 27.41 | 26.06 |
| CDY20754 | Canola | nucleus | 29.25 | 24.06 |
| AT5G55660.1 | Thale cress | nucleus | 28.33 | 23.78 |
| Bra035582.1-P | Field mustard | nucleus | 28.79 | 23.68 |
| KRH46364 | Soybean | nucleus | 29.25 | 23.67 |
| CDY28645 | Canola | nucleus | 28.33 | 23.33 |
| CDX89318 | Canola | nucleus | 24.66 | 22.87 |
| CDY17352 | Canola | extracellular, vacuole | 28.94 | 22.83 |
| KRG98502 | Soybean | nucleus | 25.42 | 22.74 |
| Zm00001d042302_P002 | Maize | nucleus | 20.06 | 22.7 |
| AT4G26630.1 | Thale cress | nucleus | 26.34 | 22.54 |
| Bra002880.1-P | Field mustard | endoplasmic reticulum | 29.56 | 22.31 |
| Bra026415.1-P | Field mustard | nucleus | 28.18 | 22.04 |
| Bra010432.1-P | Field mustard | nucleus | 26.49 | 15.3 |
| CDX97358 | Canola | nucleus | 27.72 | 14.92 |
Protein Annotations
| EnsemblPlants:Zm00001d013757_P010 | EnsemblPlants:Zm00001d013757_T010 | EnsemblPlantsGene:Zm00001d013757 | EntrezGene:103626062 | Gene3D:1.10.10.60 | InterPro:DEK_C |
| ncoils:Coil | PANTHER:PTHR13468 | PANTHER:PTHR13468:SF8 | PFAM:PF08766 | ProteinID:AQK64310.1 | ProteinID:AQK64311.1 |
| SEG:seg | SUPFAM:SSF109715 | UniParc:UPI0008428077 | UniProt:A0A1D6GLX4 | MapMan:35.2 | : |
Description
DEK domain-containing chromatin associated protein
Coordinates
chr5:+:19522958..19529525
Molecular Weight (calculated)
71859.2 Da
IEP (calculated)
4.887
GRAVY (calculated)
-1.331
Length
653 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEKAVTNGA AAADVAAPDN KDNTKEEVSK SKEPVANKDA EEQNKGSENG AEGHSGGDVN MAEAEITEEG GGGDAGAAKQ VDSGDVKTDA DTKEDANART
101: EEGEDAKMTE ADVGSTEVKD KEEKEDEVEN TNEQDESKEQ EKGASAEQEE NEGKETDADE NQEEEEAEEK GSADKKDEAE AEGDKKTEEN KETPKNKKAR
201: SARDRSQGKD KEQDGSKSKE AKSLLNTPSP YGTNRPQRER KIVERLVEVI DKEPNKNFVV EKGQGTPLKD IPSVAHRISR KKPSDLKFLH SILFGRKGKA
301: VDFKGHILQF SGFVWHESDE KQRAKAKEKL DKCVKDTLLD LCWTLGIPTP KANIRKEDIV SKLLDFIAEP HSAAESWGSD DQGSNSKKRK RGGESASKTP
401: DGTPSRSRKK FVDDGTSSKR QNKALQYDTE EDESMKSDSE ENIDEDSDEA ADKQEVDYGS GKEKAGKKLS EVKESSGKKK SNTGSGHKSG PPNKIIKNLV
501: KKVSSKIHEE KESPNGSAKV FSRKKKPTAE KEIKEKKSSG KKVTKGKGES AEAVLPSKDD LRKTITEILK KVDFNTATFS DILKKLDNHY KMDLTPKKEA
601: IKVMIQDELT KLSEEDEEGE GDEDAGKKQQ QPQAQEIEAS FVDFSHQLEN LTP
101: EEGEDAKMTE ADVGSTEVKD KEEKEDEVEN TNEQDESKEQ EKGASAEQEE NEGKETDADE NQEEEEAEEK GSADKKDEAE AEGDKKTEEN KETPKNKKAR
201: SARDRSQGKD KEQDGSKSKE AKSLLNTPSP YGTNRPQRER KIVERLVEVI DKEPNKNFVV EKGQGTPLKD IPSVAHRISR KKPSDLKFLH SILFGRKGKA
301: VDFKGHILQF SGFVWHESDE KQRAKAKEKL DKCVKDTLLD LCWTLGIPTP KANIRKEDIV SKLLDFIAEP HSAAESWGSD DQGSNSKKRK RGGESASKTP
401: DGTPSRSRKK FVDDGTSSKR QNKALQYDTE EDESMKSDSE ENIDEDSDEA ADKQEVDYGS GKEKAGKKLS EVKESSGKKK SNTGSGHKSG PPNKIIKNLV
501: KKVSSKIHEE KESPNGSAKV FSRKKKPTAE KEIKEKKSSG KKVTKGKGES AEAVLPSKDD LRKTITEILK KVDFNTATFS DILKKLDNHY KMDLTPKKEA
601: IKVMIQDELT KLSEEDEEGE GDEDAGKKQQ QPQAQEIEAS FVDFSHQLEN LTP
001: MGEEDTKVIV EPTANGTSSL QKTSDAISGK EVQENASGKE VQESKKEEDT GLEKMEIDDE GKQHEGESET GDKEVEVTEE EKKDVGEDKE QPEADKMDED
101: TDDKNLKADD GVSGVATEED AVMKESVESA DNKDAENPEG EQEKESKEEK LEGGKANGNE EGDTEEKLVG GDKGDDVDEA EKVENVDEDD KEEALKEKNE
201: AELAEEEETN KGEEVKEANK EDDVEADTKV AEPEVEDKKT ESKDENEDKE EEKEDEKEES MDDKEDEKEE SNDDDKEDEK EESNDDKEDK KEDIKKSNKR
301: GKGKTEKTRG KTKSDEEKKD IEPKTPFFSD RPVRERKSVE RLVAVVDKDS SREFHVEKGK GTPLKDIPNV AYKVSRKKSD EVFKQLHTIL FGGKRVKATQ
401: LKAHILRFSG YKWQGDEEKA KLKVKEKFEK INKEKLLEFC DLFDISVAKA TTKKEDIVTK LVEFLEKPHA TTDVLVNEKE KGVKRKRTPK KSSPAAGSSS
501: SKRSAKSQKK TEEATRTNKK SVAHSDDESE EEKEDDEEEE KEQEVEEEEE ENENGIPDKS EDEAPQLSES EENVESEEES EEETKKKKRG SRTSSDKKES
601: AGKSRSKKTA VPTKSSPPKK ATQKRSAGKR KKSDDDSDTS PKASSKRKKT EKPAKEQAAA PLKSVSKEKP VIGKRGGKGK DKNKEPSDEE LKTAIIDILK
701: GVDFNTATFT DILKRLDAKF NISLASKKSS IKRMIQDELT KLADEAEDEE GEEEDAEHEE EEEKEKAKGS GGGEEVKA
101: TDDKNLKADD GVSGVATEED AVMKESVESA DNKDAENPEG EQEKESKEEK LEGGKANGNE EGDTEEKLVG GDKGDDVDEA EKVENVDEDD KEEALKEKNE
201: AELAEEEETN KGEEVKEANK EDDVEADTKV AEPEVEDKKT ESKDENEDKE EEKEDEKEES MDDKEDEKEE SNDDDKEDEK EESNDDKEDK KEDIKKSNKR
301: GKGKTEKTRG KTKSDEEKKD IEPKTPFFSD RPVRERKSVE RLVAVVDKDS SREFHVEKGK GTPLKDIPNV AYKVSRKKSD EVFKQLHTIL FGGKRVKATQ
401: LKAHILRFSG YKWQGDEEKA KLKVKEKFEK INKEKLLEFC DLFDISVAKA TTKKEDIVTK LVEFLEKPHA TTDVLVNEKE KGVKRKRTPK KSSPAAGSSS
501: SKRSAKSQKK TEEATRTNKK SVAHSDDESE EEKEDDEEEE KEQEVEEEEE ENENGIPDKS EDEAPQLSES EENVESEEES EEETKKKKRG SRTSSDKKES
601: AGKSRSKKTA VPTKSSPPKK ATQKRSAGKR KKSDDDSDTS PKASSKRKKT EKPAKEQAAA PLKSVSKEKP VIGKRGGKGK DKNKEPSDEE LKTAIIDILK
701: GVDFNTATFT DILKRLDAKF NISLASKKSS IKRMIQDELT KLADEAEDEE GEEEDAEHEE EEEKEKAKGS GGGEEVKA
Arabidopsis Description
DEK domain-containing chromatin associated protein [Source:UniProtKB/TrEMBL;Acc:F4K4Y5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.