Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU78150 | Sorghum | nucleus | 55.11 | 53.72 |
| Os05t0463500-01 | Rice | nucleus | 15.48 | 45.53 |
| Zm00001d010556_P002 | Maize | nucleus | 56.44 | 41.06 |
| TraesCS1A01G288400.1 | Wheat | nucleus | 35.04 | 39.45 |
| TraesCS1D01G287400.1 | Wheat | nucleus | 34.15 | 38.32 |
| TraesCS1B01G297800.1 | Wheat | nucleus | 33.78 | 38.13 |
| HORVU1Hr1G071590.1 | Barley | nucleus | 33.93 | 35.89 |
| Bra028857.1-P | Field mustard | nucleus | 10.22 | 30.0 |
| CDY04873 | Canola | nucleus | 10.15 | 29.78 |
| CDY55692 | Canola | nucleus | 9.78 | 29.14 |
| GSMUA_Achr8P02720_001 | Banana | nucleus | 16.74 | 26.87 |
| KRH32403 | Soybean | nucleus | 13.19 | 26.53 |
| Solyc04g049950.1.1 | Tomato | nucleus | 8.07 | 24.06 |
| AT5G02950.2 | Thale cress | nucleus | 11.26 | 24.05 |
| KRH34572 | Soybean | nucleus | 13.93 | 23.1 |
| PGSC0003DMT400087303 | Potato | nucleus | 13.19 | 23.09 |
| KRH19811 | Soybean | nucleus | 13.26 | 23.01 |
| Zm00001d010984_P001 | Maize | plastid | 8.59 | 22.7 |
| VIT_08s0040g02440.t01 | Wine grape | nucleus | 14.52 | 22.07 |
| KRH70385 | Soybean | nucleus | 16.37 | 21.77 |
| KRH33337 | Soybean | nucleus | 16.15 | 21.39 |
| CDX73990 | Canola | nucleus | 9.11 | 21.24 |
| CDY07935 | Canola | nucleus | 8.74 | 20.89 |
| Zm00001d041940_P001 | Maize | nucleus | 11.85 | 18.89 |
| Zm00001d011770_P001 | Maize | nucleus | 11.93 | 18.11 |
| AT3G09670.1 | Thale cress | nucleus | 9.63 | 17.91 |
| GSMUA_Achr5P29300_001 | Banana | nucleus | 19.63 | 16.75 |
| Bra001301.1-P | Field mustard | nucleus | 3.7 | 14.79 |
| Zm00001d024841_P001 | Maize | nucleus | 8.44 | 13.41 |
| PGSC0003DMT400027409 | Potato | nucleus | 14.96 | 12.2 |
| VIT_13s0019g03620.t01 | Wine grape | nucleus | 16.0 | 11.51 |
| KRG92228 | Soybean | nucleus | 14.67 | 11.35 |
| Zm00001d010869_P001 | Maize | nucleus | 8.07 | 11.07 |
| Solyc09g007340.2.1 | Tomato | cytosol | 16.67 | 10.62 |
Protein Annotations
| EnsemblPlants:Zm00001d038396_P003 | EnsemblPlants:Zm00001d038396_T003 | EnsemblPlantsGene:Zm00001d038396 | EntrezGene:103630441 | Gene3D:2.30.30.140 | InterPro:IPR000313 |
| InterPro:PWWP_dom | PANTHER:PTHR42851 | PANTHER:PTHR42851:SF4 | PFAM:PF00855 | PFscan:PS50812 | ProteinID:AQK86553.1 |
| ProteinID:AQK86555.1 | SEG:seg | SMART:SM00293 | SUPFAM:SSF63748 | UniParc:UPI0004DEBAAD | UniProt:A0A1D6M648 |
| MapMan:35.2 | : | : | : | : | : |
Description
Putative PWWP domain family protein
Coordinates
chr6:+:156306931..156312457
Molecular Weight (calculated)
145900.0 Da
IEP (calculated)
4.197
GRAVY (calculated)
-0.629
Length
1350 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSGTVAASD PGGGETKLVA GDDVTISEAA GDMPAFAADL KVEEKATLTM DVAHERGDMA VSDPLYATES AGMVGTEGHG DEPVEDVDAV NGEDGGEEGT
0101: QEAGAGGLLT ETERKPVLVV DVPAAAGSAA PEHAEAAYCI SESNKVEENH VNAEPGRKNN ESDHGVVPSD KEIQNNVPGD MEESSEEHEG DGAPVVDQPN
0201: NTSEMLPQTG EQFPDSGNSP DSNLEAASLG NVDQGARYRL PPLDKGRFQV ADLVWGKVKS HPWWPGEIFD PTDASELALK HRKKGSHLVA YFGDSTFAWC
0301: DESQLKPFVT NYSQMEKQSS SDGFVGSVNN ALEELSRRVL SGLSCSCLAE ELADNGMSYT VDNAGLKDGV TCSAVNRPEI LNCFSPENLL NYIKELALFP
0401: GQGGDLLELV IACSQLTSFY RSKGCPELAS FQTSDAWVED DLDGIDTLST QNVMVEEPVI NEVQPTQDKP KRGRGRPRKQ KAGHDQVVME KRSTSNQVND
0501: TSYNEKKRNL KSFEDSEKSS APTGGGSFKI GECIRRAASQ LTGSSSIMKA QNEPTVYNNA AEGENGEFDV SSDDAGDELT VEKRAKRRRL HINHAADPRE
0601: LLSQLCLVAT EPMNGYSFSA MIIGYFNDYR NYIVSTTTEA NIVDKGTSRR GRKRKEVIPS PEVETTDHMQ DSYWSGLSLY NHPVHDLKRE SPTTRPRRKR
0701: RSSRHAYIPL SELGEPVPKK QIQVMERSII HVDEKMVDEL KPTALVLTFG RSASIPSELD LVKMFSLYGP LKERGTKVHR ETNTVKVVFK KRVDAERAFS
0801: AAGKYSTFGP SLRSYRLVSM PLSPETQSAN NPENHGLEIP GLNMSEAPKD SMEVDLVQKT DKVKVTGELS SEEVETVRQT CLVEAADSTF VSEVDRLEKA
0901: GNIDAELIVH VNQIGEGAEA ASVSEESSQQ VGDIEQAYTQ KAASVSDLPT EIETLHSDAI IKELPQKAPD NMQTDIATAP KQSHNPGDNA VFEAVTEVPS
1001: TAQDHSEDDV GDEVPEEHTV FPVLQSQTPG EKLVGQSETE QKVGPEDPKS QAENLTVEPV VQGAVEQVEI ELESKTTVEV SCEQGYSIEQ TVNMEAVIEA
1101: SGGQLEVGRR ISEDESMADA NIEHSMVMVD ETVEAKVVPL EESTENNAAT IGVVEETAEG ETKEEAPDEK GKIENNEDAD KLAGETRAGE ITVEAPDEKT
1201: EIKADADTPA GETKECEITV EAPDEKIANK GIVEPIIREI TEDQTAAGEP DEEATTTEET VEDVKVLDDK STADGKPVEN ATVATNEDST TVENTLKDAM
1301: VAPPGTNTTN AEETALGATV KALDEDALAV EKTIEDTSVE ASDVQAGRCK
0101: QEAGAGGLLT ETERKPVLVV DVPAAAGSAA PEHAEAAYCI SESNKVEENH VNAEPGRKNN ESDHGVVPSD KEIQNNVPGD MEESSEEHEG DGAPVVDQPN
0201: NTSEMLPQTG EQFPDSGNSP DSNLEAASLG NVDQGARYRL PPLDKGRFQV ADLVWGKVKS HPWWPGEIFD PTDASELALK HRKKGSHLVA YFGDSTFAWC
0301: DESQLKPFVT NYSQMEKQSS SDGFVGSVNN ALEELSRRVL SGLSCSCLAE ELADNGMSYT VDNAGLKDGV TCSAVNRPEI LNCFSPENLL NYIKELALFP
0401: GQGGDLLELV IACSQLTSFY RSKGCPELAS FQTSDAWVED DLDGIDTLST QNVMVEEPVI NEVQPTQDKP KRGRGRPRKQ KAGHDQVVME KRSTSNQVND
0501: TSYNEKKRNL KSFEDSEKSS APTGGGSFKI GECIRRAASQ LTGSSSIMKA QNEPTVYNNA AEGENGEFDV SSDDAGDELT VEKRAKRRRL HINHAADPRE
0601: LLSQLCLVAT EPMNGYSFSA MIIGYFNDYR NYIVSTTTEA NIVDKGTSRR GRKRKEVIPS PEVETTDHMQ DSYWSGLSLY NHPVHDLKRE SPTTRPRRKR
0701: RSSRHAYIPL SELGEPVPKK QIQVMERSII HVDEKMVDEL KPTALVLTFG RSASIPSELD LVKMFSLYGP LKERGTKVHR ETNTVKVVFK KRVDAERAFS
0801: AAGKYSTFGP SLRSYRLVSM PLSPETQSAN NPENHGLEIP GLNMSEAPKD SMEVDLVQKT DKVKVTGELS SEEVETVRQT CLVEAADSTF VSEVDRLEKA
0901: GNIDAELIVH VNQIGEGAEA ASVSEESSQQ VGDIEQAYTQ KAASVSDLPT EIETLHSDAI IKELPQKAPD NMQTDIATAP KQSHNPGDNA VFEAVTEVPS
1001: TAQDHSEDDV GDEVPEEHTV FPVLQSQTPG EKLVGQSETE QKVGPEDPKS QAENLTVEPV VQGAVEQVEI ELESKTTVEV SCEQGYSIEQ TVNMEAVIEA
1101: SGGQLEVGRR ISEDESMADA NIEHSMVMVD ETVEAKVVPL EESTENNAAT IGVVEETAEG ETKEEAPDEK GKIENNEDAD KLAGETRAGE ITVEAPDEKT
1201: EIKADADTPA GETKECEITV EAPDEKIANK GIVEPIIREI TEDQTAAGEP DEEATTTEET VEDVKVLDDK STADGKPVEN ATVATNEDST TVENTLKDAM
1301: VAPPGTNTTN AEETALGATV KALDEDALAV EKTIEDTSVE ASDVQAGRCK
001: MSTESERIES VSEANASSLE VGNDQMSEAL AGQAQELKTI GDDKEGCGNF ASAGDNGMEK VNGFTNLVKE TESVNGELDL GTRTENVGGE SNQSDKKVLV
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF36]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.