Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d041940_P001 | Maize | nucleus | 64.57 | 67.77 |
| KXG34235 | Sorghum | nucleus | 62.88 | 62.6 |
| HORVU3Hr1G117740.2 | Barley | nucleus | 8.44 | 39.06 |
| Zm00001d010984_P001 | Maize | plastid | 15.64 | 27.2 |
| CDY55692 | Canola | nucleus | 13.84 | 27.15 |
| Os11t0303500-01 | Rice | nucleus | 21.6 | 26.52 |
| CDY04873 | Canola | nucleus | 13.5 | 26.09 |
| Bra028857.1-P | Field mustard | nucleus | 13.39 | 25.87 |
| KRH32403 | Soybean | nucleus | 17.32 | 22.95 |
| AT5G02950.2 | Thale cress | nucleus | 16.31 | 22.94 |
| GSMUA_Achr9P04320_001 | Banana | nucleus | 18.67 | 21.73 |
| GSMUA_Achr10P... | Banana | nucleus | 17.1 | 21.44 |
| PGSC0003DMT400087303 | Potato | nucleus | 17.21 | 19.84 |
| KRH19811 | Soybean | nucleus | 17.32 | 19.79 |
| CDY07935 | Canola | nucleus | 12.49 | 19.65 |
| CDX73990 | Canola | nucleus | 12.26 | 18.83 |
| VIT_08s0040g02440.t01 | Wine grape | nucleus | 18.11 | 18.13 |
| Solyc04g049950.1.1 | Tomato | nucleus | 8.55 | 16.78 |
| GSMUA_Achr11P... | Banana | nucleus | 13.5 | 16.44 |
| KRH34572 | Soybean | nucleus | 14.96 | 16.34 |
| AT3G09670.1 | Thale cress | nucleus | 13.27 | 16.25 |
| KRH70385 | Soybean | nucleus | 17.89 | 15.66 |
| KRH33337 | Soybean | nucleus | 17.77 | 15.51 |
| Bra001301.1-P | Field mustard | nucleus | 5.29 | 13.91 |
| Zm00001d024841_P001 | Maize | nucleus | 11.81 | 12.35 |
| Zm00001d038396_P003 | Maize | nucleus | 18.11 | 11.93 |
| Zm00001d010869_P001 | Maize | nucleus | 12.15 | 10.96 |
| VIT_13s0019g03620.t01 | Wine grape | nucleus | 20.36 | 9.64 |
| PGSC0003DMT400027409 | Potato | nucleus | 17.89 | 9.6 |
| KRG92228 | Soybean | nucleus | 16.54 | 8.42 |
| Zm00001d010556_P002 | Maize | nucleus | 17.21 | 8.24 |
| TraesCS3B01G603700.1 | Wheat | nucleus | 1.57 | 7.25 |
| Solyc09g007340.2.1 | Tomato | cytosol | 16.87 | 7.08 |
Protein Annotations
| EnsemblPlants:Zm00001d011770_P001 | EnsemblPlants:Zm00001d011770_T001 | EnsemblPlantsGene:Zm00001d011770 | EntrezGene:103636254 | Gene3D:2.30.30.140 | InterPro:IPR000313 |
| InterPro:PWWP_dom | ncoils:Coil | PANTHER:PTHR35491 | PANTHER:PTHR35491:SF3 | PFAM:PF00855 | PFscan:PS50812 |
| ProteinID:AQK97965.1 | SEG:seg | SMART:SM00293 | SUPFAM:SSF63748 | UniParc:UPI000221AFF3 | UniProt:K7V562 |
| MapMan:35.2 | : | : | : | : | : |
Description
Putative PWWP domain family protein
Coordinates
chr8:+:161262490..161265159
Molecular Weight (calculated)
97169.3 Da
IEP (calculated)
10.240
GRAVY (calculated)
-0.811
Length
889 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSRGIASK SADKDSTSTR PARLRVMRQE VKDFLTSPRR SRPKKQPPPP HPPPPLEEKV KERKKGKEKA ATEEEKFERA QYSCAFQDEG DGGRDFAPPE
101: LVWGKVRSHP WWPGQVFDAA DASEIALQHR KAGAPLIAYF WDRTFAWSDS SALLPFCANF TRLSTQSTMS SFVSAIDSAL LEVERRVEAG LSCGCFSSNI
201: ATKQEVQNSG IRQGAYGAAI DSVYTRDAFH GKTFLDYISA LGKKPLAGAD LLDLATAKAQ LRAFNRSRGS RDLPEFVMFE GIAEITEMTH TKGERMHKSE
301: DDVLSKEKKS RRAGSSRRKG EALPEAANDD AIDEDSNGGA GNDTLSQGEK SKRVKSSSKK KTDIYKHLYG LKTDSVADSR TLDKKGVDDV LSERKSGRTL
401: RSTSKKEDAL EGLKRLAKHG IEELAGKSKD APVLKENNQR HGAGSAHKGR ITEDGYHRLG DCNAEDLTSP SKRRLGHNEN SIIKPVTISE HGRKKKKLSE
501: LMAAIGRPNS VSGGKSKARG KRSLHGLAEK PEDADRHSKD TLMTRKRKKL NTLGDLSSQS EPLSPKKSTK VGELMSKAAG SNMLQAAPAV KAISAVSQTK
601: PRRAKHRQVN AADKSPRHMK VNRGNSKAAS KESLSCGEML RQISLAACGL KQREEIAPSS VNFFTDFRKN SIFSSSDVDE RMPEKATNAE STPSEQPIVD
701: HMQDDYWSDI LINVEEPLSS LKKKIYKSKK RANKKAPQVK KPPVNSLATA ENADEPRSEG NQDTENGEQL RNKTKLFSAN GSQQNGTKSG EEMENSFLSG
801: LVLHFSRPSD VPSCSDLIKI FSQYGPVNEA KAEVANSTSS AQVIFKRRMD AEAAFAGAGK ISALGPALTS FRLTDFPASA SGNKASHGA
101: LVWGKVRSHP WWPGQVFDAA DASEIALQHR KAGAPLIAYF WDRTFAWSDS SALLPFCANF TRLSTQSTMS SFVSAIDSAL LEVERRVEAG LSCGCFSSNI
201: ATKQEVQNSG IRQGAYGAAI DSVYTRDAFH GKTFLDYISA LGKKPLAGAD LLDLATAKAQ LRAFNRSRGS RDLPEFVMFE GIAEITEMTH TKGERMHKSE
301: DDVLSKEKKS RRAGSSRRKG EALPEAANDD AIDEDSNGGA GNDTLSQGEK SKRVKSSSKK KTDIYKHLYG LKTDSVADSR TLDKKGVDDV LSERKSGRTL
401: RSTSKKEDAL EGLKRLAKHG IEELAGKSKD APVLKENNQR HGAGSAHKGR ITEDGYHRLG DCNAEDLTSP SKRRLGHNEN SIIKPVTISE HGRKKKKLSE
501: LMAAIGRPNS VSGGKSKARG KRSLHGLAEK PEDADRHSKD TLMTRKRKKL NTLGDLSSQS EPLSPKKSTK VGELMSKAAG SNMLQAAPAV KAISAVSQTK
601: PRRAKHRQVN AADKSPRHMK VNRGNSKAAS KESLSCGEML RQISLAACGL KQREEIAPSS VNFFTDFRKN SIFSSSDVDE RMPEKATNAE STPSEQPIVD
701: HMQDDYWSDI LINVEEPLSS LKKKIYKSKK RANKKAPQVK KPPVNSLATA ENADEPRSEG NQDTENGEQL RNKTKLFSAN GSQQNGTKSG EEMENSFLSG
801: LVLHFSRPSD VPSCSDLIKI FSQYGPVNEA KAEVANSTSS AQVIFKRRMD AEAAFAGAGK ISALGPALTS FRLTDFPASA SGNKASHGA
001: MSTESERIES VSEANASSLE VGNDQMSEAL AGQAQELKTI GDDKEGCGNF ASAGDNGMEK VNGFTNLVKE TESVNGELDL GTRTENVGGE SNQSDKKVLV
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF36]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.