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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G117740.2 Barley nucleus 14.51 14.58
CDY55692 Canola nucleus 6.74 2.87
Bra028857.1-P Field mustard nucleus 6.74 2.83
CDY04873 Canola nucleus 6.74 2.83
CDY07935 Canola nucleus 7.25 2.48
CDX73990 Canola nucleus 7.25 2.42
KRH32403 Soybean nucleus 7.77 2.24
AT5G02950.2 Thale cress nucleus 7.25 2.22
TraesCS1B01G077800.1 Wheat cytosol 6.22 2.18
TraesCS1B01G297600.1 Wheat nucleus 7.77 2.02
Solyc04g049950.1.1 Tomato nucleus 4.66 1.99
AT3G09670.1 Thale cress nucleus 7.25 1.93
TraesCS1B01G077900.1 Wheat nucleus 5.18 1.8
GSMUA_Achr11P... Banana nucleus 6.74 1.78
GSMUA_Achr9P04320_001 Banana nucleus 6.74 1.7
PGSC0003DMT400087303 Potato nucleus 6.74 1.69
KRH19811 Soybean nucleus 6.74 1.67
Zm00001d011770_P001 Maize nucleus 7.25 1.57
KXG34235 Sorghum nucleus 7.25 1.57
TraesCS1B01G116700.1 Wheat plastid 8.29 1.48
KRH70385 Soybean nucleus 7.77 1.48
KRH34572 Soybean nucleus 6.22 1.47
KRH33337 Soybean nucleus 7.77 1.47
VIT_08s0040g02440.t01 Wine grape nucleus 6.74 1.46
Zm00001d041940_P001 Maize nucleus 6.22 1.42
GSMUA_Achr10P... Banana nucleus 5.18 1.41
TraesCS1B01G297800.1 Wheat nucleus 8.29 1.34
TraesCS3B01G603600.1 Wheat nucleus 10.36 1.32
KRG92228 Soybean nucleus 11.4 1.26
Solyc09g007340.2.1 Tomato cytosol 11.92 1.09
Bra001301.1-P Field mustard nucleus 1.55 0.89
VIT_13s0019g03620.t01 Wine grape nucleus 8.29 0.85
PGSC0003DMT400027409 Potato nucleus 7.25 0.85
Os11t0303500-01 Rice nucleus 2.59 0.69
Protein Annotations
EnsemblPlants:TraesCS3B01G603700.1EnsemblPlantsGene:TraesCS3B01G603700GO:GO:0003674GO:GO:0003676GO:GO:0005488InterPro:RBD_domain_sf
ncoils:CoilPANTHER:PTHR35491PANTHER:PTHR35491:SF3SEG:segSUPFAM:SSF54928TIGR:cd00590
MapMan:35.2:::::
Description
No Description!
Coordinates
chr3B:+:822972695..822973276
Molecular Weight (calculated)
20795.0 Da
IEP (calculated)
4.801
GRAVY (calculated)
-0.839
Length
193 amino acids
Sequence
(BLAST)
001: MSEKAARSSP APSEPPVAGD HMKDDYWADI LINVEEPLSS QAKKKDKGKM RSSKKQRRDD EMKQDEMPAE EAKAESQQDK AEAENGKANG AEEDASLTGL
101: VLHFSKPGVV PSRGDLIDIF SQYGPVSEAR TETDEHSSSA QVVFRRRADA EAAFGGAGKI AALRPGLDSF RLTDFPCAAA AAAFRGDDGP KQE
Best Arabidopsis Sequence Match ( AT5G02950.1 )
(BLAST)
001: MSTEPEGVES DSNADFAINA SSFDYGMAHT SETLADPMSF QAQDLVVNLT GVERKVFVSA RDDKDSLCNG VDFDADSDLL KNKDKKGFSK ENLKLFDSDL
101: VWAKLRSYPW WPGLVFDKSV ASKAAMRHFK KGNVLVAYFG DCTFAWNNAS QIKPFHQNFS QMQEQSNSAE FRDAIDCALD EVSRRVEFGL SCSCVSEEAY
201: NKLKTQNIIN AGIREDSSVR YGGDKLSDGI SFEPAKLVDY MKHLACFPCY DATEKLQFVI NRAQVLAFQQ WKDYSHFIDY ETFVRSVESA ATLASLPEVN
301: MDEGISAKKR KTDYKDNAEQ TKEKTLSDLT VKKRCGSRST EKLDGKSHSE KKRKVESSES GKSEKRIKKS QQKEDSVSKH SNEESLLSVG DTNKLQKTAE
401: PCHGTGVENE MNSLTPTLKP CRASKSTEVE NEKTKKPRHQ ELAERKISSP DEMLSSLHAA NTSTGIPDSI NIDPSNYEDF EKFINELFCS KLNGDSKKAS
501: ITETSEPCDK KDSAEEEILP ANKEITGSGS KEQIGLKDCS ADSLPPYALV LNFADSGSVP SEEKLNEIFK RYGPLHESKT KVTMKGKRAK VVFKRGEDAK
601: TAFSSAGKYS IFGPSLLSYR LEYVCPKRKK TT
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYZ0]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.