Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH70385 | Soybean | nucleus | 19.71 | 36.45 |
| KRH33337 | Soybean | nucleus | 19.07 | 35.13 |
| KRH34572 | Soybean | nucleus | 15.18 | 35.01 |
| Solyc04g049950.1.1 | Tomato | nucleus | 8.26 | 34.22 |
| VIT_08s0040g02440.t01 | Wine grape | nucleus | 14.28 | 30.18 |
| Os05t0463500-01 | Rice | nucleus | 6.66 | 27.23 |
| Os05t0122500-00 | Rice | nucleus | 7.46 | 26.57 |
| GSMUA_Achr8P02720_001 | Banana | nucleus | 11.56 | 25.8 |
| GSMUA_Achr10P... | Banana | nucleus | 9.43 | 24.96 |
| TraesCS1A01G059600.1 | Wheat | cytosol | 7.19 | 24.68 |
| HORVU3Hr1G117740.2 | Barley | nucleus | 2.5 | 24.48 |
| GSMUA_Achr9P04320_001 | Banana | nucleus | 9.96 | 24.48 |
| PGSC0003DMT400027409 | Potato | nucleus | 21.52 | 24.4 |
| HORVU1Hr1G071710.17 | Barley | endoplasmic reticulum | 7.14 | 24.32 |
| TraesCS1D01G060800.1 | Wheat | cytosol | 6.98 | 23.99 |
| Zm00001d010984_P001 | Maize | plastid | 6.45 | 23.68 |
| EES18937 | Sorghum | nucleus, plastid | 6.29 | 23.32 |
| TraesCS1B01G077800.1 | Wheat | cytosol | 6.77 | 23.05 |
| HORVU1Hr1G012310.1 | Barley | cytosol, nucleus | 4.58 | 22.69 |
| TraesCS1A01G059700.1 | Wheat | cytosol | 4.48 | 22.58 |
| TraesCS1B01G077900.1 | Wheat | nucleus | 6.61 | 22.26 |
| TraesCS1D01G060900.1 | Wheat | nucleus | 6.45 | 22.24 |
| Os05t0463400-01 | Rice | nucleus | 7.3 | 22.06 |
| HORVU1Hr1G012320.1 | Barley | cytosol, nucleus | 4.1 | 20.48 |
| Zm00001d011770_P001 | Maize | nucleus | 9.64 | 20.36 |
| TraesCS1D01G287200.1 | Wheat | nucleus | 8.2 | 20.29 |
| KXG34235 | Sorghum | nucleus | 9.54 | 20.04 |
| TraesCS1A01G288200.1 | Wheat | nucleus | 8.04 | 19.84 |
| TraesCS1B01G297600.1 | Wheat | nucleus | 7.83 | 19.84 |
| Zm00001d041940_P001 | Maize | nucleus | 8.9 | 19.72 |
| GSMUA_Achr11P... | Banana | nucleus | 7.46 | 19.18 |
| VIT_14s0066g01120.t01 | Wine grape | nucleus | 9.38 | 18.09 |
| TraesCS1D01G287400.1 | Wheat | nucleus | 10.66 | 16.63 |
| TraesCS1B01G297800.1 | Wheat | nucleus | 10.55 | 16.56 |
| TraesCS1A01G288400.1 | Wheat | nucleus | 10.5 | 16.43 |
| Os11t0303500-01 | Rice | nucleus | 6.23 | 16.16 |
| Zm00001d038396_P003 | Maize | nucleus | 11.51 | 16.0 |
| OQU78150 | Sorghum | nucleus | 11.61 | 15.74 |
| GSMUA_Achr5P29300_001 | Banana | nucleus | 13.16 | 15.61 |
| HORVU1Hr1G071590.1 | Barley | nucleus | 10.55 | 15.52 |
| KRG92228 | Soybean | nucleus | 14.38 | 15.47 |
| Zm00001d010556_P002 | Maize | nucleus | 11.67 | 11.8 |
| VIT_14s0060g02400.t01 | Wine grape | nucleus | 7.3 | 10.95 |
| TraesCS3B01G603700.1 | Wheat | nucleus | 0.85 | 8.29 |
| HORVU3Hr1G117730.2 | Barley | nucleus, plastid | 7.14 | 7.63 |
| TraesCS3B01G603600.1 | Wheat | nucleus | 6.02 | 7.45 |
| TraesCS3D01G543800.1 | Wheat | nucleus | 5.38 | 6.6 |
| VIT_17s0000g08510.t01 | Wine grape | nucleus | 2.88 | 4.37 |
Protein Annotations
| EntrezGene:100852955 | wikigene:100852955 | Gene3D:2.30.30.140 | MapMan:35.1 | EMBL:AM425323 | ProteinID:CAN75603 |
| ProteinID:CAN75603.1 | ProteinID:CCB56223 | ProteinID:CCB56223.1 | UniProt:F6HNK4 | EMBL:FN595998 | InterPro:IPR000313 |
| EntrezGene:LOC100852955 | wikigene:LOC100852955 | PFAM:PF00855 | PFscan:PS50812 | PANTHER:PTHR42851 | PANTHER:PTHR42851:SF4 |
| InterPro:PWWP_dom | SMART:SM00293 | SUPFAM:SSF63748 | UniParc:UPI000210A458 | ArrayExpress:VIT_13s0019g03620 | EnsemblPlantsGene:VIT_13s0019g03620 |
| EnsemblPlants:VIT_13s0019g03620.t01 | unigene:Vvi.4067 | RefSeq:XP_003633464 | RefSeq:XP_003633464.1 | RefSeq:XP_010658451.1 | RefSeq:XP_010658452.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr13:+:4778471..4786311
Molecular Weight (calculated)
201147.0 Da
IEP (calculated)
4.095
GRAVY (calculated)
-0.492
Length
1877 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDESKDVGGS RVLESAVTVS APGRGEILVE ELGDETLIED SFSEGGGDEG NGEDIMVEVV GSDVFVDGVG GNSNDESGWG GLVVEPGLEK DMKFLDGGGA
0101: AHDLASQEVG DLDSEVWDRG IGTGVGESSA VASSLGGEAQ VAVAEEVLAG VVGEEDMEGG RELVDGSVSV AGGEGDKAQN LGTGTEAEGS LAVQESAGED
0201: TKVVEKEVAL RISEEETDRG LVGKGVERVM APVDEGEEAI DGLVSRKVGV LDKVWNPGIE TAVASSSVIA KPLSVGGQVE EGLNPKYEVR GADALARVLS
0301: CSETSLISTG EGVSGGTEKD GGVCASSVLS DEQTQVVVGG EISGEILCSK VEVMETDAFH ESLQCAVEEQ QLEAKIVVET TESHSGATAD LMSLSQSTEV
0401: GGGEAATVGN RVLLNPKIGA PNTKGLSEIV PSSENDQNLK VEADHGSTEN VACSGGICHM NTKEVMNSKD SVMGADAFDG GLQYSSKDKK LMDKTVESGT
0501: RDHNDACVSP DERTQVAERG KASPVHNEKI LDSKIEVVGS DDADGKCCSP EKDQDMEVVG GSGNTNIDVG VCVDPVSSRD QIPVVGTEIS QLNNKEISSS
0601: PIEVSNTDSL DRISAFSENN QNLQAETASE GMVDNSVRLA DSEALDGHTL LANGEEVAAM DIKEAAPNEV ELSGNDALVG NLCLVKDQEL VGANAENFVE
0701: ADGDQVNIAA EGDIAGVDPM DVSSPEIDAP NGNLACPESV PCADPESNGE QTCKIAVGED TVIGDETVLD VPKTDVLDGN SSFTENQNSK VETDSGSTEK
0801: RLSQTDAVSF SEGTQVALGG EVAAMDAEAV LDSKPEDRGV DVLDGDLCGP DEVNALQVDP EFSCKQSLVV QGDSITVEDV KNSYSKAEVP ECDALNKDLS
0901: LSEKDQELKT ESALGSTKME AGTHVGPSGL GTVSDSLEEH TSVQHEKLEM VVQSDKILAH ELDGDQSVNP STVEKMSDQV SCVTAISNSV VEVAVGSQGA
1001: VSIFSFHDES DTLSSCTADI ICDFPGGNQG PEVHIVSNYD SLPDGDDSMR SHAHDLVISP EIAKQAVEAK DQSFNIDEDN IIDSDVPDTK VSEFGDNDGI
1101: VGSLVVDLDA GPRRDGNWNL HGEISKKNIP SLDESHHEEA DFQGTVDNLG FEMSECLEES TAFDDAQVIS DVGQETEAEG QVTDAEQVCL QGGQEIGAEE
1201: QGTDNEQQKS LEEKTVKRAT LKPGNLIRGH QATYQLPPES EGEFSVSDLV WGKVRSHPWW PGQIFDPSDA SEKAMKYHKK DCFLVAYFGD RTFAWNEASL
1301: LKPFRTHFSQ IVKQSNSEVF HNAVDCALDE VSRRVELGLA CSCIPKDDYD EIKCQIVENT GIRSESSRRD GVDKSATMSL LEPDTFVEYI KALAQFPSGG
1401: ADQLELVIAK AQLLAFSRLK GYHRLPEFQY CGGLQENDAD ISCFNEMMEH ETDVLMGDDG KFKIQNSSSH KRKHNLKDSA YPRKKERSLS ELMSGMAYSP
1501: DDENDSDGKA TSKPVSSSGR KRKVVDSFGN DLEVQDRTES IFVAKVSNTS APSPRQSFKV GDCIRRAASQ LTGSPSILKC SGERPQKVVD GSIGKLGGPG
1601: SDVSLMSPED PQRMIIPMEY PSLDEMLSQL RLAARDPMKG YSFLDTIVSF FSEFRNSILL GRYSGRESLT MDKVAGNRRK KSSQPIGSPE EFEFEDMNDT
1701: YWTDRVIQNT SEEQPEQPEQ PPRSARKRKE PQFGSTDPEK SPQLGRRSYS RKRYSDGNHE LAVEKPANYV DEKERELLPA ELILNFPEVD SVPSEMILNK
1801: MFRRFGPLKE SETEVDRVTS RARVVFKRCS DAEVAFSSAG MINIFGPTHV NYQLNYSPST LFTPLPIAIE QDQDVES
0101: AHDLASQEVG DLDSEVWDRG IGTGVGESSA VASSLGGEAQ VAVAEEVLAG VVGEEDMEGG RELVDGSVSV AGGEGDKAQN LGTGTEAEGS LAVQESAGED
0201: TKVVEKEVAL RISEEETDRG LVGKGVERVM APVDEGEEAI DGLVSRKVGV LDKVWNPGIE TAVASSSVIA KPLSVGGQVE EGLNPKYEVR GADALARVLS
0301: CSETSLISTG EGVSGGTEKD GGVCASSVLS DEQTQVVVGG EISGEILCSK VEVMETDAFH ESLQCAVEEQ QLEAKIVVET TESHSGATAD LMSLSQSTEV
0401: GGGEAATVGN RVLLNPKIGA PNTKGLSEIV PSSENDQNLK VEADHGSTEN VACSGGICHM NTKEVMNSKD SVMGADAFDG GLQYSSKDKK LMDKTVESGT
0501: RDHNDACVSP DERTQVAERG KASPVHNEKI LDSKIEVVGS DDADGKCCSP EKDQDMEVVG GSGNTNIDVG VCVDPVSSRD QIPVVGTEIS QLNNKEISSS
0601: PIEVSNTDSL DRISAFSENN QNLQAETASE GMVDNSVRLA DSEALDGHTL LANGEEVAAM DIKEAAPNEV ELSGNDALVG NLCLVKDQEL VGANAENFVE
0701: ADGDQVNIAA EGDIAGVDPM DVSSPEIDAP NGNLACPESV PCADPESNGE QTCKIAVGED TVIGDETVLD VPKTDVLDGN SSFTENQNSK VETDSGSTEK
0801: RLSQTDAVSF SEGTQVALGG EVAAMDAEAV LDSKPEDRGV DVLDGDLCGP DEVNALQVDP EFSCKQSLVV QGDSITVEDV KNSYSKAEVP ECDALNKDLS
0901: LSEKDQELKT ESALGSTKME AGTHVGPSGL GTVSDSLEEH TSVQHEKLEM VVQSDKILAH ELDGDQSVNP STVEKMSDQV SCVTAISNSV VEVAVGSQGA
1001: VSIFSFHDES DTLSSCTADI ICDFPGGNQG PEVHIVSNYD SLPDGDDSMR SHAHDLVISP EIAKQAVEAK DQSFNIDEDN IIDSDVPDTK VSEFGDNDGI
1101: VGSLVVDLDA GPRRDGNWNL HGEISKKNIP SLDESHHEEA DFQGTVDNLG FEMSECLEES TAFDDAQVIS DVGQETEAEG QVTDAEQVCL QGGQEIGAEE
1201: QGTDNEQQKS LEEKTVKRAT LKPGNLIRGH QATYQLPPES EGEFSVSDLV WGKVRSHPWW PGQIFDPSDA SEKAMKYHKK DCFLVAYFGD RTFAWNEASL
1301: LKPFRTHFSQ IVKQSNSEVF HNAVDCALDE VSRRVELGLA CSCIPKDDYD EIKCQIVENT GIRSESSRRD GVDKSATMSL LEPDTFVEYI KALAQFPSGG
1401: ADQLELVIAK AQLLAFSRLK GYHRLPEFQY CGGLQENDAD ISCFNEMMEH ETDVLMGDDG KFKIQNSSSH KRKHNLKDSA YPRKKERSLS ELMSGMAYSP
1501: DDENDSDGKA TSKPVSSSGR KRKVVDSFGN DLEVQDRTES IFVAKVSNTS APSPRQSFKV GDCIRRAASQ LTGSPSILKC SGERPQKVVD GSIGKLGGPG
1601: SDVSLMSPED PQRMIIPMEY PSLDEMLSQL RLAARDPMKG YSFLDTIVSF FSEFRNSILL GRYSGRESLT MDKVAGNRRK KSSQPIGSPE EFEFEDMNDT
1701: YWTDRVIQNT SEEQPEQPEQ PPRSARKRKE PQFGSTDPEK SPQLGRRSYS RKRYSDGNHE LAVEKPANYV DEKERELLPA ELILNFPEVD SVPSEMILNK
1801: MFRRFGPLKE SETEVDRVTS RARVVFKRCS DAEVAFSSAG MINIFGPTHV NYQLNYSPST LFTPLPIAIE QDQDVES
001: MSTESERIES VSEANASSLE VGNDQMSEAL AGQAQELKTI GDDKEGCGNF ASAGDNGMEK VNGFTNLVKE TESVNGELDL GTRTENVGGE SNQSDKKVLV
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF36]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.