Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0463400-01 | Rice | nucleus | 38.56 | 28.5 |
| CDY55692 | Canola | nucleus | 18.95 | 19.21 |
| TraesCS1B01G297800.1 | Wheat | nucleus | 49.24 | 18.9 |
| Bra028857.1-P | Field mustard | nucleus | 18.74 | 18.7 |
| TraesCS1A01G288400.1 | Wheat | nucleus | 48.37 | 18.52 |
| CDY04873 | Canola | nucleus | 18.52 | 18.48 |
| CDX73990 | Canola | nucleus | 22.88 | 18.13 |
| TraesCS1D01G287400.1 | Wheat | nucleus | 46.62 | 17.79 |
| Os05t0122500-00 | Rice | nucleus | 20.26 | 17.65 |
| CDY07935 | Canola | nucleus | 21.13 | 17.17 |
| HORVU1Hr1G071590.1 | Barley | nucleus | 47.49 | 17.08 |
| KRH32403 | Soybean | nucleus | 24.4 | 16.69 |
| GSMUA_Achr8P02720_001 | Banana | nucleus | 30.28 | 16.53 |
| AT3G09670.1 | Thale cress | nucleus | 25.71 | 16.25 |
| OQU78150 | Sorghum | nucleus | 46.84 | 15.52 |
| Zm00001d038396_P003 | Maize | nucleus | 45.53 | 15.48 |
| Os05t0149200-01 | Rice | plastid | 12.42 | 15.24 |
| AT5G02950.2 | Thale cress | nucleus | 20.26 | 14.72 |
| KRH19811 | Soybean | nucleus | 24.62 | 14.52 |
| VIT_08s0040g02440.t01 | Wine grape | nucleus | 24.62 | 12.73 |
| PGSC0003DMT400087303 | Potato | nucleus | 21.35 | 12.71 |
| KRH70385 | Soybean | nucleus | 27.23 | 12.32 |
| KRH34572 | Soybean | nucleus | 21.57 | 12.16 |
| KRH33337 | Soybean | nucleus | 26.14 | 11.78 |
| Zm00001d010556_P002 | Maize | nucleus | 45.97 | 11.37 |
| GSMUA_Achr5P29300_001 | Banana | nucleus | 33.55 | 9.73 |
| Bra001301.1-P | Field mustard | nucleus | 6.97 | 9.47 |
| Os11t0303500-01 | Rice | nucleus | 11.76 | 7.46 |
| PGSC0003DMT400027409 | Potato | nucleus | 25.93 | 7.19 |
| VIT_13s0019g03620.t01 | Wine grape | nucleus | 27.23 | 6.66 |
| KRG92228 | Soybean | nucleus | 20.7 | 5.44 |
| Solyc04g049950.1.1 | Tomato | nucleus | 5.23 | 5.3 |
| Solyc09g007340.2.1 | Tomato | cytosol | 20.91 | 4.53 |
Protein Annotations
| EnsemblPlants:Os05t0463500-01 | EnsemblPlantsGene:Os05g0463500 | Gene3D:2.30.30.140 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR000313 | InterPro:PWWP_dom | PANTHER:PTHR42851 | PANTHER:PTHR42851:SF4 | PFAM:PF00855 | PFscan:PS50812 |
| ProteinID:BAS94431.1 | SEG:seg | SMART:SM00293 | SUPFAM:SSF63748 | UniParc:UPI0003939AE5 | UniProt:A0A0P0WNI4 |
| MapMan:35.2 | : | : | : | : | : |
Description
PWWP domain containing protein. (Os05t0463500-01)
Coordinates
chr5:+:22764522..22766078
Molecular Weight (calculated)
49265.1 Da
IEP (calculated)
3.891
GRAVY (calculated)
-0.553
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MTEAVEEEVE VEVAGDAEAE AAVVAGDAAG DPLYGTESAG MVVDEPVDAA EGGVDGGDGG EEGLEAEARV LQGEAATEPV PAGGDVAIAS EVAAEAHDSA
101: TPEHAEAESN DLEENHVDRG KDNGVAVAHC DDEMQNNVEG SSEIQEDDGA PTLEQQDDES EMPLPSSVSN FELCARYSLP PLDKGEFRVS DLVWGKVKSH
201: PWWPGEIFDP SDASELALKH QKKGSHLIAY FGDNTFAWCD ESQLKPFVSN YSQMEKQSSS DAFVSSVNYA LEELSRRILS GMSCSCLPEE LSDNGMSYMV
301: ENAGLKDGVT CSAVNRSEIL SCCSPENLLN YVKSLALFPG QGGDLLELVI ACSQLTSFYR SKGCPELASF QTGSAWVENG VDPSSIKDDV VDEVVTNEEP
401: PANDKPKRGR GRPRKQKPQD GLELTEKKST SNLSTDNAYD HPAERQMDME FDEFDGLQS
101: TPEHAEAESN DLEENHVDRG KDNGVAVAHC DDEMQNNVEG SSEIQEDDGA PTLEQQDDES EMPLPSSVSN FELCARYSLP PLDKGEFRVS DLVWGKVKSH
201: PWWPGEIFDP SDASELALKH QKKGSHLIAY FGDNTFAWCD ESQLKPFVSN YSQMEKQSSS DAFVSSVNYA LEELSRRILS GMSCSCLPEE LSDNGMSYMV
301: ENAGLKDGVT CSAVNRSEIL SCCSPENLLN YVKSLALFPG QGGDLLELVI ACSQLTSFYR SKGCPELASF QTGSAWVENG VDPSSIKDDV VDEVVTNEEP
401: PANDKPKRGR GRPRKQKPQD GLELTEKKST SNLSTDNAYD HPAERQMDME FDEFDGLQS
001: MSTESERIES VSEANASSLE VGNDQMSEAL AGQAQELKTI GDDKEGCGNF ASAGDNGMEK VNGFTNLVKE TESVNGELDL GTRTENVGGE SNQSDKKVLV
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF36]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.