Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G297800.1 | Wheat | nucleus | 63.09 | 67.31 |
| TraesCS1A01G288400.1 | Wheat | nucleus | 52.9 | 56.3 |
| TraesCS1D01G287400.1 | Wheat | nucleus | 51.88 | 55.03 |
| Os05t0463500-01 | Rice | nucleus | 17.08 | 47.49 |
| HORVU1Hr1G071710.17 | Barley | endoplasmic reticulum | 19.04 | 44.1 |
| Zm00001d038396_P003 | Maize | nucleus | 35.89 | 33.93 |
| OQU78150 | Sorghum | nucleus | 35.5 | 32.71 |
| CDY04873 | Canola | nucleus | 10.19 | 28.26 |
| Bra028857.1-P | Field mustard | nucleus | 10.11 | 28.04 |
| CDY55692 | Canola | nucleus | 9.72 | 27.37 |
| KRH32403 | Soybean | nucleus | 14.11 | 26.83 |
| HORVU3Hr1G117740.2 | Barley | nucleus | 4.0 | 26.56 |
| GSMUA_Achr8P02720_001 | Banana | nucleus | 16.85 | 25.56 |
| Zm00001d010556_P002 | Maize | nucleus | 35.81 | 24.62 |
| KRH19811 | Soybean | nucleus | 14.42 | 23.65 |
| AT5G02950.2 | Thale cress | nucleus | 11.29 | 22.78 |
| Solyc04g049950.1.1 | Tomato | nucleus | 8.07 | 22.74 |
| CDY07935 | Canola | nucleus | 9.95 | 22.48 |
| PGSC0003DMT400087303 | Potato | nucleus | 13.4 | 22.18 |
| KRH70385 | Soybean | nucleus | 17.01 | 21.38 |
| VIT_08s0040g02440.t01 | Wine grape | nucleus | 14.81 | 21.28 |
| CDX73990 | Canola | nucleus | 9.64 | 21.24 |
| KRH34572 | Soybean | nucleus | 13.48 | 21.13 |
| KRH33337 | Soybean | nucleus | 16.85 | 21.1 |
| HORVU1Hr1G012310.1 | Barley | cytosol, nucleus | 5.72 | 19.26 |
| HORVU1Hr1G012320.1 | Barley | cytosol, nucleus | 5.56 | 18.88 |
| AT3G09670.1 | Thale cress | nucleus | 9.72 | 17.08 |
| GSMUA_Achr5P29300_001 | Banana | nucleus | 19.83 | 15.99 |
| Bra001301.1-P | Field mustard | nucleus | 4.0 | 15.09 |
| PGSC0003DMT400027409 | Potato | nucleus | 15.2 | 11.71 |
| KRG92228 | Soybean | nucleus | 15.6 | 11.4 |
| HORVU1Hr1G020500.2 | Barley | nucleus, plastid | 9.4 | 11.02 |
| VIT_13s0019g03620.t01 | Wine grape | nucleus | 15.52 | 10.55 |
| Solyc09g007340.2.1 | Tomato | cytosol | 17.01 | 10.24 |
| HORVU3Hr1G117730.2 | Barley | nucleus, plastid | 13.4 | 9.73 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G071590.1 | EnsemblPlantsGene:HORVU1Hr1G071590 | Gene3D:2.30.30.140 | InterPro:IPR000313 | InterPro:PWWP_dom | PANTHER:PTHR42851 |
| PANTHER:PTHR42851:SF4 | PFAM:PF00855 | PFscan:PS50812 | SEG:seg | SMART:SM00293 | SUPFAM:SSF63748 |
| UniParc:UPI000B47E336 | UniProt:A0A287G5P1 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:494075596..494080154
Molecular Weight (calculated)
128598.0 Da
IEP (calculated)
4.358
GRAVY (calculated)
-0.510
Length
1276 amino acids
Sequence
(BLAST)
(BLAST)
0001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXDAAGPA GDSDVAMAEA SEEVAAVAEV KEEGPALARG
0101: GELTAGAVPD APDAGRQEAD AAAAAAVNPL YATEAAGMVV AEGCGDGDPI NGLGSGSSDI KAGTLTGEPE WKPVTAGDVA GGSATSEQAE AESSELGEYH
0201: VNATPVAVAG SEGQDNGVAH FEEELQNGSA KSAQCSRYSL PPLEKEGFRV SDLVWGKVKS HPWWPGEIFD PSNASELALK HQKKGGRLVA YFGDNSFAWC
0301: DDSQLKPFVT DYSQMEKQSS ADSFVGSVNY ALEELSRRIL SGMSCSCLPE ELSDNGMSYM VENAGLKDGV TCSAVNRSEI LASFSPESLL QYVKSLALFP
0401: GQGGDLLELV IACSQLTSFY RSKGCPELAS FQTGSAWVED GTDTSPIENV VVEEVVISEV PPPEVKPKRG RGRPRKHKPE DKLELPGKKK PAVAVERQMI
0501: KDFDDKKRSL DSFEDLGTKS PTGRSFKIGE CIRRAANQLT GPSSIVKSQN ENTAEAENAE FDVSSDDDAA ANALTVEKCA KRRRLHSHHL ADPKELFSQL
0601: CSVAIEPTDG YNFPALTISY FSDFRNYIVS VATEASIIEK STSKRRRKKR VLPSPELETT DHMQDSYWSG LSLLNHPIHS LKRASTNTRP RRRRKSSHET
0701: DLSAVQDQQM APKKQIQVIE RSIIHVDEKI VDEWKPTALV LNFGRSTDLL SETDLIKKFG RYGPLKESEI DVQKSTNTVK IVFKKRADAE RAFSAAGKYG
0801: TLGPSLRSYR LVNMPFSLGE SEPNKSEACP GDHGPELPGP TEPKVSLDAV KDNQVDKTEK AEAVQASSGE QVEAVKKTCQ AEPGKQSSGA QVETVQQACQ
0901: PEADAVMKTG KNAADLTELS DQIATTDVTA QTMKIQAPKD AVEIPCDVKL EDEALTEESV DQVATEQVKV PSDAVPDTSK VQPETPIEQE GTAAEAAQDL
1001: TEVSVQEADL KKQIVEPRTA EIEAEQVSCP EQTVQVEDVI DASGGHTNVG RKTAEEITMT EVMVGGSVES KVVAPVEETV EDKATAGTLG EAIEGKSTAE
1101: APGDETENTD AADSLGEETV EDKATAGTLG EAIEGKSTAE APGDETENTD AAESLGGEVG VGEATGDSPD ERVAVEALAG MSAQGETAAE AADAEITTAG
1201: KTAEGVSVGV RTAKKPVKGA TVEAPGKKAT PAKKPVEDAT VEARDEKAAT AKKTTEDAKV EAPDEKAMTA EDDAMA
0101: GELTAGAVPD APDAGRQEAD AAAAAAVNPL YATEAAGMVV AEGCGDGDPI NGLGSGSSDI KAGTLTGEPE WKPVTAGDVA GGSATSEQAE AESSELGEYH
0201: VNATPVAVAG SEGQDNGVAH FEEELQNGSA KSAQCSRYSL PPLEKEGFRV SDLVWGKVKS HPWWPGEIFD PSNASELALK HQKKGGRLVA YFGDNSFAWC
0301: DDSQLKPFVT DYSQMEKQSS ADSFVGSVNY ALEELSRRIL SGMSCSCLPE ELSDNGMSYM VENAGLKDGV TCSAVNRSEI LASFSPESLL QYVKSLALFP
0401: GQGGDLLELV IACSQLTSFY RSKGCPELAS FQTGSAWVED GTDTSPIENV VVEEVVISEV PPPEVKPKRG RGRPRKHKPE DKLELPGKKK PAVAVERQMI
0501: KDFDDKKRSL DSFEDLGTKS PTGRSFKIGE CIRRAANQLT GPSSIVKSQN ENTAEAENAE FDVSSDDDAA ANALTVEKCA KRRRLHSHHL ADPKELFSQL
0601: CSVAIEPTDG YNFPALTISY FSDFRNYIVS VATEASIIEK STSKRRRKKR VLPSPELETT DHMQDSYWSG LSLLNHPIHS LKRASTNTRP RRRRKSSHET
0701: DLSAVQDQQM APKKQIQVIE RSIIHVDEKI VDEWKPTALV LNFGRSTDLL SETDLIKKFG RYGPLKESEI DVQKSTNTVK IVFKKRADAE RAFSAAGKYG
0801: TLGPSLRSYR LVNMPFSLGE SEPNKSEACP GDHGPELPGP TEPKVSLDAV KDNQVDKTEK AEAVQASSGE QVEAVKKTCQ AEPGKQSSGA QVETVQQACQ
0901: PEADAVMKTG KNAADLTELS DQIATTDVTA QTMKIQAPKD AVEIPCDVKL EDEALTEESV DQVATEQVKV PSDAVPDTSK VQPETPIEQE GTAAEAAQDL
1001: TEVSVQEADL KKQIVEPRTA EIEAEQVSCP EQTVQVEDVI DASGGHTNVG RKTAEEITMT EVMVGGSVES KVVAPVEETV EDKATAGTLG EAIEGKSTAE
1101: APGDETENTD AADSLGEETV EDKATAGTLG EAIEGKSTAE APGDETENTD AAESLGGEVG VGEATGDSPD ERVAVEALAG MSAQGETAAE AADAEITTAG
1201: KTAEGVSVGV RTAKKPVKGA TVEAPGKKAT PAKKPVEDAT VEARDEKAAT AKKTTEDAKV EAPDEKAMTA EDDAMA
0001: MEIEVVLGIG EDAGPKPCSA EIESAEKTLK DDGVVQENGV RVSDNGEKKS DVVVDVDEKN EKNLNESGVI EDCVMNGVSS LLKLKEDVEE EEEEEEEEEE
0101: EEEDGEDEEE EEEEEEEEEE EEHGYCVGDF VWGKIKNHPW WPGQIYDPSD ASDLALKIKQ KGKLLVACFG DGTFAWCGAS QLKPFAESFK ECSKVSNSRS
0201: FLGAVEEAVE EIGRHIERVL VCDCAEEKKH EFDSPLVNNA GIKEGVLVRD VRREMISSLL IGKHGEILKD VKSFAETVSF SGLLELEILK RKVSAFYRSN
0301: RGYGLTEYHE PQSVPGLEDK NNDDDDDDEE KNVNDGLQWR AKRSRVEEVA ALDHEESSSL QRSLEKCSGF PDHRLPHRRK EKSITEIIEK ESAAKVRFET
0401: EPADGDVKSN VKSGRKKTKR HDEVNGDLEN VTTTALWRRR KSEVATIEDG GNKQVVESSK GKTSRKKKKM DVDDGDDDGS GDKEESEEKE ISDLEINIDS
0501: TSLASLRKKV RFDDSVVERS TENGETATQT SKRERKKSKY LSPDFLSDFS RKGRKKSTIE SESSKVSSQS QVDERVTDAS DSLMEVEEDT LDKPCEPSSD
0601: NGLGQEELSR ELSNAVDFLR LGATPKEMQD LIRVAALGTQ YPKDSSSRDM VREFMTIYRS FTYHDGANHK FLGSYDSSDK EKEELSEMGK PVTKGKEKKD
0701: KKGKAKQKAE EIEVTGKEEN ETDKHGKMKK ERKRKKSESK KEGGEGEETQ KEANESTKKE RKRKKSESKK QSDGEEETQK EPSESTKKER KRKNPESKKK
0801: AEAVEEEETR KESVESTKKE RKRKKPKHDE EEVPNETEKP EKKKKKKREG KSKKKETETE FSGAELYVTF GPGSSLPKKE DLIEIYEKFG ALDKERTDTV
0901: DNNFSAHVAF LDVADGEKAF ESSLEKCPFT SNSTVKFRLK YPNERTEEKK TEAEVAETTM EVEYLKKKLD EMKLLLDGCE GGMTEEVKVK LEGEMVNLLE
1001: KVIEMRSS
0101: EEEDGEDEEE EEEEEEEEEE EEHGYCVGDF VWGKIKNHPW WPGQIYDPSD ASDLALKIKQ KGKLLVACFG DGTFAWCGAS QLKPFAESFK ECSKVSNSRS
0201: FLGAVEEAVE EIGRHIERVL VCDCAEEKKH EFDSPLVNNA GIKEGVLVRD VRREMISSLL IGKHGEILKD VKSFAETVSF SGLLELEILK RKVSAFYRSN
0301: RGYGLTEYHE PQSVPGLEDK NNDDDDDDEE KNVNDGLQWR AKRSRVEEVA ALDHEESSSL QRSLEKCSGF PDHRLPHRRK EKSITEIIEK ESAAKVRFET
0401: EPADGDVKSN VKSGRKKTKR HDEVNGDLEN VTTTALWRRR KSEVATIEDG GNKQVVESSK GKTSRKKKKM DVDDGDDDGS GDKEESEEKE ISDLEINIDS
0501: TSLASLRKKV RFDDSVVERS TENGETATQT SKRERKKSKY LSPDFLSDFS RKGRKKSTIE SESSKVSSQS QVDERVTDAS DSLMEVEEDT LDKPCEPSSD
0601: NGLGQEELSR ELSNAVDFLR LGATPKEMQD LIRVAALGTQ YPKDSSSRDM VREFMTIYRS FTYHDGANHK FLGSYDSSDK EKEELSEMGK PVTKGKEKKD
0701: KKGKAKQKAE EIEVTGKEEN ETDKHGKMKK ERKRKKSESK KEGGEGEETQ KEANESTKKE RKRKKSESKK QSDGEEETQK EPSESTKKER KRKNPESKKK
0801: AEAVEEEETR KESVESTKKE RKRKKPKHDE EEVPNETEKP EKKKKKKREG KSKKKETETE FSGAELYVTF GPGSSLPKKE DLIEIYEKFG ALDKERTDTV
0901: DNNFSAHVAF LDVADGEKAF ESSLEKCPFT SNSTVKFRLK YPNERTEEKK TEAEVAETTM EVEYLKKKLD EMKLLLDGCE GGMTEEVKVK LEGEMVNLLE
1001: KVIEMRSS
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FNE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.