Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g049950.1.1 | Tomato | nucleus | 18.24 | 66.67 |
| KRH33337 | Soybean | nucleus | 19.26 | 31.31 |
| KRH70385 | Soybean | nucleus | 18.84 | 30.74 |
| KRH34572 | Soybean | nucleus | 14.61 | 29.73 |
| Os05t0463500-01 | Rice | nucleus | 7.19 | 25.93 |
| PGSC0003DMT400087303 | Potato | nucleus | 12.02 | 25.81 |
| GSMUA_Achr9P04320_001 | Banana | nucleus | 11.53 | 25.0 |
| Os05t0122500-00 | Rice | nucleus | 7.85 | 24.67 |
| GSMUA_Achr8P02720_001 | Banana | nucleus | 12.14 | 23.9 |
| EES18937 | Sorghum | nucleus, plastid | 7.25 | 23.72 |
| HORVU1Hr1G071710.17 | Barley | endoplasmic reticulum | 7.85 | 23.59 |
| HORVU3Hr1G117740.2 | Barley | nucleus | 2.72 | 23.44 |
| TraesCS1D01G060800.1 | Wheat | cytosol | 7.55 | 22.89 |
| GSMUA_Achr10P... | Banana | nucleus | 9.78 | 22.85 |
| TraesCS1A01G059600.1 | Wheat | cytosol | 7.37 | 22.3 |
| Zm00001d010984_P001 | Maize | plastid | 6.76 | 21.92 |
| TraesCS1B01G077800.1 | Wheat | cytosol | 7.25 | 21.78 |
| VIT_13s0019g03620.t01 | Wine grape | nucleus | 24.4 | 21.52 |
| TraesCS1B01G077900.1 | Wheat | nucleus | 7.13 | 21.18 |
| TraesCS1D01G060900.1 | Wheat | nucleus | 6.94 | 21.14 |
| Os05t0463400-01 | Rice | nucleus | 7.67 | 20.45 |
| TraesCS1A01G059700.1 | Wheat | cytosol | 4.59 | 20.43 |
| TraesCS1B01G297600.1 | Wheat | nucleus | 9.0 | 20.11 |
| HORVU1Hr1G012320.1 | Barley | cytosol, nucleus | 4.35 | 19.15 |
| TraesCS1D01G287200.1 | Wheat | nucleus | 8.76 | 19.1 |
| TraesCS1A01G288200.1 | Wheat | nucleus | 8.76 | 19.05 |
| PGSC0003DMT400001285 | Potato | nucleus | 9.54 | 18.97 |
| HORVU1Hr1G012310.1 | Barley | cytosol, nucleus | 4.23 | 18.47 |
| GSMUA_Achr11P... | Banana | nucleus | 8.09 | 18.36 |
| KXG34235 | Sorghum | nucleus | 9.78 | 18.14 |
| Zm00001d041940_P001 | Maize | nucleus | 9.18 | 17.95 |
| Zm00001d011770_P001 | Maize | nucleus | 9.6 | 17.89 |
| PGSC0003DMT400063505 | Potato | nucleus | 3.93 | 17.29 |
| TraesCS1B01G297800.1 | Wheat | nucleus | 12.08 | 16.72 |
| TraesCS1D01G287400.1 | Wheat | nucleus | 11.78 | 16.21 |
| TraesCS1A01G288400.1 | Wheat | nucleus | 11.41 | 15.76 |
| HORVU1Hr1G071590.1 | Barley | nucleus | 11.71 | 15.2 |
| Zm00001d038396_P003 | Maize | nucleus | 12.2 | 14.96 |
| Os11t0303500-01 | Rice | nucleus | 6.4 | 14.64 |
| OQU78150 | Sorghum | nucleus | 12.08 | 14.44 |
| GSMUA_Achr5P29300_001 | Banana | nucleus | 13.77 | 14.41 |
| PGSC0003DMT400058347 | Potato | cytosol | 5.68 | 14.22 |
| KRG92228 | Soybean | nucleus | 14.19 | 13.47 |
| PGSC0003DMT400063506 | Potato | nucleus | 4.47 | 11.54 |
| Zm00001d010556_P002 | Maize | nucleus | 12.14 | 10.83 |
| HORVU3Hr1G117730.2 | Barley | nucleus, plastid | 8.88 | 8.37 |
| TraesCS3B01G603600.1 | Wheat | nucleus | 7.37 | 8.04 |
| TraesCS3B01G603700.1 | Wheat | nucleus | 0.85 | 7.25 |
| PGSC0003DMT400069444 | Potato | nucleus | 4.83 | 6.99 |
| TraesCS3D01G543800.1 | Wheat | nucleus | 5.56 | 6.01 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400027409 | EnsemblPlantsGene:PGSC0003DMG400010571 | EntrezGene:102601545 | Gene3D:2.30.30.140 | InterPro:IPR000313 | InterPro:PWWP_dom |
| ncoils:Coil | PANTHER:PTHR42851 | PANTHER:PTHR42851:SF4 | PFAM:PF00855 | PFscan:PS50812 | PGSC:PGSC0003DMG400010571 |
| RefSeq:XP_006340456.1 | SEG:seg | SMART:SM00293 | SUPFAM:SSF63748 | UniParc:UPI000296F9B1 | UniProt:M1APN1 |
| MapMan:35.2 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400010571]
Coordinates
chr4:-:48413469..48420392
Molecular Weight (calculated)
180061.0 Da
IEP (calculated)
4.148
GRAVY (calculated)
-0.671
Length
1656 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDEEEGVSSV TSVSEPSVAE TLVENLGCEG QTDEVYNDED GGEIMVEVVG SDVFVDGVCG DGEDDELGKD GSGKVDSLDE DRDFRSGEAG QEDYGNTGNG
0101: VEGVLEVAGS SRDVAVAAGT EIVPSVMACS VVEKVNLSVS EEDVEAKIVV RSTESAARAD LASVDVAGLF RGVSETVDNE SDSRLPSETA DRVLEQVSTG
0201: VREEDAEGNV GRSTVSVEGS AELTSQRLDI SDDGVWNPGI EPLAESSSFV PQDNSNRETE EANNLSLDSS EKDQSSVREI VGQASEKDIS SHAKDQISDH
0301: PDEGAVSGES DVLGKSHSEV VTMETNAHDQ DRNALGDKDE NTHSEVEPME TDVREQRDDL GNNDEDSHQD SELVQKKHSE AETMETDVHD KETVGLGIED
0401: ENSHPDVEPM ETDVYDQEGG VLNKDENNNS NAVVELPEKI NHEDDQIINM CHQVPAGHDN LGVDIPVSQD SASDCADEMV SLRPNSQIPE DKGEEIKVGS
0501: GDSRISAEHT PVVHDHSLGI NGTNVPLHPG NQEHSFKGNL AAENGVIGSS CEKANHGEDR ELKVDNMHED KNNFAVCTQA ETSDMEIQTS NCKEVYLEGS
0601: EVSTCKVPIS SDNGSLGGSD ELPDVQPKVA DGVSEVTHDD FLLPVQASAH DTGNLDEMEV EGVCPETTGT LTFSMNDESL NIVEVDARLE NDARVGPLEA
0701: PYEPACRSDG ASVEMDKDRD AQLGTTTASL SCSMGENILE DETRVSLETM ISTRDMNTGD ETNKVTHLLP ESLDGDMLVQ HVENESLLLF DNYAGKEGDP
0801: QMSAVPSNDD VMTEDPEGTS LACQDTSKTS DSNAVNVKSP SLLIESDFEV EAEDTALGEG PVQGDDLAHD TKNGAVTGLR SNITEESEFY VKQEGVVEHV
0901: NMLASEMDLD AENAATADKI SNEENKSNLE DAIKSQAAIN FGADVPPVRD QIVETCISDT SDTKMNQVDE DQDSFKATED LVFHVHAPEI MKVTDEQEKG
1001: EVEKLYPGTV QESPEQDKGT EEVVSETSHT VMLNEKPVSL LNMHPGYLIP PENEGEYSIS DLVWGKVRSH PWWPGQIFDP SDASEKAIKY HKKDGFLVAY
1101: FGDRTFAWND ASVLRPFCSH FSQIEKQSNS ETFQNAISSA LEEVSRRVEL GLACSCTPGD SYDEISCQIV ENTGIREESS KRYGVDKSTG VTSFVPDKLL
1201: HYMKALALSP TCRADRLDLT IARAQLVAFC RFKGYRLPPQ FSLSGEFLEN DADIPHVDSA IDDNGHASEG SEQHPTSKVS ARKRKHSSKD SSQNKLKERS
1301: LSELMDNMEC EYSPDGEDDL DEKSFTSSKK RKAVDSRTDG SDKKTSAYAA KVSTTASVSP KPSFRIGECI QRVASQLTRS ASLLKGSSDQ SGADVQSQDS
1401: PKGKVVIPTE LPSANELLSQ LQLVARAPLK SYNFLKTSTT FFSGFRNSVA VGQNSMKQNL SAGRAAGGRK KRASQTVAGF AEEFEFDDVN DSYWTDRVVQ
1501: NCGEEQPLQN SQSVTVQDPE KSNKPARRSY TRKRKSSVDH DMTPGVPPED IEKRKHEPAE LILIFAEGSP LPSEMNLNKM FRRFGPLKEL ETEVHQETSR
1601: ARVVFKRGSD AEVAHSSVGK FNIFGSRQVT YELSYTPVIS FKPMLLTITP GLEGAI
0101: VEGVLEVAGS SRDVAVAAGT EIVPSVMACS VVEKVNLSVS EEDVEAKIVV RSTESAARAD LASVDVAGLF RGVSETVDNE SDSRLPSETA DRVLEQVSTG
0201: VREEDAEGNV GRSTVSVEGS AELTSQRLDI SDDGVWNPGI EPLAESSSFV PQDNSNRETE EANNLSLDSS EKDQSSVREI VGQASEKDIS SHAKDQISDH
0301: PDEGAVSGES DVLGKSHSEV VTMETNAHDQ DRNALGDKDE NTHSEVEPME TDVREQRDDL GNNDEDSHQD SELVQKKHSE AETMETDVHD KETVGLGIED
0401: ENSHPDVEPM ETDVYDQEGG VLNKDENNNS NAVVELPEKI NHEDDQIINM CHQVPAGHDN LGVDIPVSQD SASDCADEMV SLRPNSQIPE DKGEEIKVGS
0501: GDSRISAEHT PVVHDHSLGI NGTNVPLHPG NQEHSFKGNL AAENGVIGSS CEKANHGEDR ELKVDNMHED KNNFAVCTQA ETSDMEIQTS NCKEVYLEGS
0601: EVSTCKVPIS SDNGSLGGSD ELPDVQPKVA DGVSEVTHDD FLLPVQASAH DTGNLDEMEV EGVCPETTGT LTFSMNDESL NIVEVDARLE NDARVGPLEA
0701: PYEPACRSDG ASVEMDKDRD AQLGTTTASL SCSMGENILE DETRVSLETM ISTRDMNTGD ETNKVTHLLP ESLDGDMLVQ HVENESLLLF DNYAGKEGDP
0801: QMSAVPSNDD VMTEDPEGTS LACQDTSKTS DSNAVNVKSP SLLIESDFEV EAEDTALGEG PVQGDDLAHD TKNGAVTGLR SNITEESEFY VKQEGVVEHV
0901: NMLASEMDLD AENAATADKI SNEENKSNLE DAIKSQAAIN FGADVPPVRD QIVETCISDT SDTKMNQVDE DQDSFKATED LVFHVHAPEI MKVTDEQEKG
1001: EVEKLYPGTV QESPEQDKGT EEVVSETSHT VMLNEKPVSL LNMHPGYLIP PENEGEYSIS DLVWGKVRSH PWWPGQIFDP SDASEKAIKY HKKDGFLVAY
1101: FGDRTFAWND ASVLRPFCSH FSQIEKQSNS ETFQNAISSA LEEVSRRVEL GLACSCTPGD SYDEISCQIV ENTGIREESS KRYGVDKSTG VTSFVPDKLL
1201: HYMKALALSP TCRADRLDLT IARAQLVAFC RFKGYRLPPQ FSLSGEFLEN DADIPHVDSA IDDNGHASEG SEQHPTSKVS ARKRKHSSKD SSQNKLKERS
1301: LSELMDNMEC EYSPDGEDDL DEKSFTSSKK RKAVDSRTDG SDKKTSAYAA KVSTTASVSP KPSFRIGECI QRVASQLTRS ASLLKGSSDQ SGADVQSQDS
1401: PKGKVVIPTE LPSANELLSQ LQLVARAPLK SYNFLKTSTT FFSGFRNSVA VGQNSMKQNL SAGRAAGGRK KRASQTVAGF AEEFEFDDVN DSYWTDRVVQ
1501: NCGEEQPLQN SQSVTVQDPE KSNKPARRSY TRKRKSSVDH DMTPGVPPED IEKRKHEPAE LILIFAEGSP LPSEMNLNKM FRRFGPLKEL ETEVHQETSR
1601: ARVVFKRGSD AEVAHSSVGK FNIFGSRQVT YELSYTPVIS FKPMLLTITP GLEGAI
001: MSTESERIES VSEANASSLE VGNDQMSEAL AGQAQELKTI GDDKEGCGNF ASAGDNGMEK VNGFTNLVKE TESVNGELDL GTRTENVGGE SNQSDKKVLV
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF36]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.