Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g067040.1.1 | Tomato | nucleus | 82.15 | 80.33 |
| PGSC0003DMT400063505 | Potato | nucleus | 13.01 | 22.87 |
| PGSC0003DMT400063506 | Potato | nucleus | 12.25 | 12.64 |
| PGSC0003DMT400001285 | Potato | nucleus | 14.22 | 11.28 |
| PGSC0003DMT400087303 | Potato | nucleus | 12.25 | 10.51 |
| PGSC0003DMT400027409 | Potato | nucleus | 14.22 | 5.68 |
| PGSC0003DMT400069444 | Potato | nucleus | 7.26 | 4.19 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400058347 | EnsemblPlantsGene:PGSC0003DMG400022663 | Gene3D:2.30.30.140 | InterPro:IPR000313 | InterPro:PWWP_dom | PANTHER:PTHR10688 |
| PANTHER:PTHR10688:SF1 | PFAM:PF00855 | PFscan:PS50812 | PGSC:PGSC0003DMG400022663 | SEG:seg | SMART:SM00293 |
| SUPFAM:SSF63748 | UniParc:UPI0002950D0A | UniProt:M1C2I8 | MapMan:35.2 | : | : |
Description
PWWP [Source:PGSC_GENE;Acc:PGSC0003DMG400022663]
Coordinates
chr1:-:58235733..58238534
Molecular Weight (calculated)
74693.1 Da
IEP (calculated)
4.787
GRAVY (calculated)
-0.651
Length
661 amino acids
Sequence
(BLAST)
(BLAST)
001: MESDKSKGTG PGSMDMYSRL TSLKEEESNN IFGVGDLVWG KVMSHPWWPG QIYDESLIPS PVCDAKRDGS VLVAFYGDYS YAWLDHNQII PFEPHFEEKS
101: NKSKIQTFFV AVEEAIDELK KRAVLGLTCS CLGNFQPTRI EGLYKVDVSG YTPGTIYSSK QIKKSRDGFH PHGMFSFVKK LAMSPRSLPN NVYGIINIAK
201: VTTYRKAVFE ENDDTYDLAF DEFEKGVDTY VQTFGVKASS SEDPVEFSKD ENQCTGDSSK KSCKRETKRK RREESPPDDQ GRKGNFRMDA FFDHLVTKSG
301: EETEKHNELN DYGAELGNVT DAFKHLKQSP STFYEESCFP DEHEKTNKKQ TLLNCQDEEE LRGFKSLHMT KKYGDQTLLT PQGDDVDIQS TLSVESEKRF
401: TEEPEWKAEP TMLVIKFSPQ TMLPTASELK AKFGYFGPFD ESALRISWGS ATCQIVFLNK CNAQAAYDYA VQSRSLFNSD VNYHLIDFDG SEKLMGECFD
501: DIQSFKSEPH HMSFQELPLQ FDTEMKPLPK ENSKCRSDVE EKAFLKGNTD TKSIVCDYPE VDVKANIDSE NSPVVLSEIL CASSPVSSSI QYKHKVGCLD
601: ETVVAINAKY SMDEGWKSHY QQNLSAISTS DLSLQLANLF QKCNEILGGI DESQNQFSNQ S
101: NKSKIQTFFV AVEEAIDELK KRAVLGLTCS CLGNFQPTRI EGLYKVDVSG YTPGTIYSSK QIKKSRDGFH PHGMFSFVKK LAMSPRSLPN NVYGIINIAK
201: VTTYRKAVFE ENDDTYDLAF DEFEKGVDTY VQTFGVKASS SEDPVEFSKD ENQCTGDSSK KSCKRETKRK RREESPPDDQ GRKGNFRMDA FFDHLVTKSG
301: EETEKHNELN DYGAELGNVT DAFKHLKQSP STFYEESCFP DEHEKTNKKQ TLLNCQDEEE LRGFKSLHMT KKYGDQTLLT PQGDDVDIQS TLSVESEKRF
401: TEEPEWKAEP TMLVIKFSPQ TMLPTASELK AKFGYFGPFD ESALRISWGS ATCQIVFLNK CNAQAAYDYA VQSRSLFNSD VNYHLIDFDG SEKLMGECFD
501: DIQSFKSEPH HMSFQELPLQ FDTEMKPLPK ENSKCRSDVE EKAFLKGNTD TKSIVCDYPE VDVKANIDSE NSPVVLSEIL CASSPVSSSI QYKHKVGCLD
601: ETVVAINAKY SMDEGWKSHY QQNLSAISTS DLSLQLANLF QKCNEILGGI DESQNQFSNQ S
001: MNSAEVNVNP RVFGDSFVTF SGNGSGKFEM IDQAEAFLME LDSVAADTGS DGNGNVDLGS RVSNSETEPR FCEMKREIRD SDHRFYELCN ESGEKKMEKR
101: RVPDYKSFLS EFDDYVAREK MGSRNSKALS YGFEVGDMVW GKVKSHPWWP GQIFNEAFAS PSVRRVKKMG YVLVAFFGDN SYGWFDPAEL IPFEPHVKEK
201: SQQTSSDHFA KAVEEAMNEV GRRSALGLTC KCRNQYNFRP INAQGYFAVD VPDYEVQAIY SSKQIQKARD SFSSVQTLAF VKRCALAPQE CDTDSLKSFQ
301: KKVAVCAFRR AVFEEFDETY EQAFRARSVY CLMKTHEPLN RAPLRETLGN PKSYTKAMNV KDSTKQDKYL PKRREEAGDM TVQFGQVQES SQFQGINGSS
401: AWDRLLQRRT PCLQTPRKHE QTGLVSMNFT SSSGNIPGKK SSVSKLSRDD DKGLAQESDV RMGEKATLFP DQEKFEPMKS LKQDETGTNS RSNKSSLKLF
501: SGGKFSAGVG IKKGNVVKRS SGEMKSENCP PEPKKKKKEY VSELNRDTPD KRKALSSGEA WAKKSSQVDS AKRRSNMLIV KLDGLQLLSN LLALSLDPLF
601: GSSDRSSFRV IRQFFFHFRS HVYQKSLATS PSATKLSKSA KTLCRANEQS KAGRNRISSD SQQDVPSTKK LKKTIQFKPL ASDKKTNQDA TKRSSLAPLN
701: PVRDQCRVPI NAKPAIVQQE KKTGPSAMVV EPTMLVMMFP PGESLPSIDL LKARFGRFGQ LDQSAIRVSW KSSICRVGFL YKLDAQTALR YVSGSKSLFG
801: NVNVTYFLRD MKASSASGDH ELKKAKRPKT DKPITKPLNQ LLEQAPPVHQ PNIQLKSCLK KPGNNRNGNH RTVRVKFMLG EKETESPFSV SILPLSSQDS
901: EPKPVNNQVD HVEPPLDPSQ LKVDISLQMM ELLTRCNDAV ANVTGLLGYV PYHSL
101: RVPDYKSFLS EFDDYVAREK MGSRNSKALS YGFEVGDMVW GKVKSHPWWP GQIFNEAFAS PSVRRVKKMG YVLVAFFGDN SYGWFDPAEL IPFEPHVKEK
201: SQQTSSDHFA KAVEEAMNEV GRRSALGLTC KCRNQYNFRP INAQGYFAVD VPDYEVQAIY SSKQIQKARD SFSSVQTLAF VKRCALAPQE CDTDSLKSFQ
301: KKVAVCAFRR AVFEEFDETY EQAFRARSVY CLMKTHEPLN RAPLRETLGN PKSYTKAMNV KDSTKQDKYL PKRREEAGDM TVQFGQVQES SQFQGINGSS
401: AWDRLLQRRT PCLQTPRKHE QTGLVSMNFT SSSGNIPGKK SSVSKLSRDD DKGLAQESDV RMGEKATLFP DQEKFEPMKS LKQDETGTNS RSNKSSLKLF
501: SGGKFSAGVG IKKGNVVKRS SGEMKSENCP PEPKKKKKEY VSELNRDTPD KRKALSSGEA WAKKSSQVDS AKRRSNMLIV KLDGLQLLSN LLALSLDPLF
601: GSSDRSSFRV IRQFFFHFRS HVYQKSLATS PSATKLSKSA KTLCRANEQS KAGRNRISSD SQQDVPSTKK LKKTIQFKPL ASDKKTNQDA TKRSSLAPLN
701: PVRDQCRVPI NAKPAIVQQE KKTGPSAMVV EPTMLVMMFP PGESLPSIDL LKARFGRFGQ LDQSAIRVSW KSSICRVGFL YKLDAQTALR YVSGSKSLFG
801: NVNVTYFLRD MKASSASGDH ELKKAKRPKT DKPITKPLNQ LLEQAPPVHQ PNIQLKSCLK KPGNNRNGNH RTVRVKFMLG EKETESPFSV SILPLSSQDS
901: EPKPVNNQVD HVEPPLDPSQ LKVDISLQMM ELLTRCNDAV ANVTGLLGYV PYHSL
Arabidopsis Description
F22F7.12 protein [Source:UniProtKB/TrEMBL;Acc:Q9MA56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.