Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400058347 | Potato | cytosol | 12.64 | 12.25 |
| PGSC0003DMT400063505 | Potato | nucleus | 5.93 | 10.11 |
| PGSC0003DMT400087303 | Potato | nucleus | 9.98 | 8.3 |
| PGSC0003DMT400001285 | Potato | nucleus | 10.76 | 8.28 |
| PGSC0003DMT400027409 | Potato | nucleus | 11.54 | 4.47 |
| PGSC0003DMT400069444 | Potato | nucleus | 5.15 | 2.88 |
| TraesCS3A01G538200.1 | Wheat | nucleus | 5.3 | 2.18 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400063506 | EnsemblPlantsGene:PGSC0003DMG402024702 | PANTHER:PTHR10688 | PANTHER:PTHR10688:SF1 | PGSC:PGSC0003DMG402024702 | SEG:seg |
| UniParc:UPI000296EF6B | UniProt:M1CAS0 | MapMan:35.2 | : | : | : |
Description
PWWP domain-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG402024702]
Coordinates
chr1:+:77183928..77185853
Molecular Weight (calculated)
69387.3 Da
IEP (calculated)
9.575
GRAVY (calculated)
-0.724
Length
641 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDEVEKDRY LFKRRDEPVN LKVHQVGPAQ AGSSDQPAHL DSSSLAGKDV SPSAADASGS TLIESFKQPS IQVANVEELH GERQAEDGGT DVVWPSDKVK
101: VRKRSGGEVS GGSSPSTERK KKKKKVVLGL KTDSNHVDAP AAVSSDNPVM EKVARESVQV PPVSTEELQM DIQPKDDPAD SSVPDRVVTE DKVEIRSDNI
201: DLRQLLSDLH AIALDPFYGA QTRNINTIRE VFLKFRSLVY QKSLALSATV ESESSTPISK LPVAAPMSDT GPSNNVKQTS NLKPQKNPAR PDDPSTKGGR
301: KRGTSDRQEE LAAKKKKKIN DLRTLAAQKK ASGKTSEVKP GECKEIPAKK LVSTPVKSSK PDSVKKNDPA EKVPDPTMLI MKFPSNGALP SISELKARFA
401: RFGALDHSAT RVFWKSSTCR LVYQYRDHAV QAFRFASAST NLFGNTNVRC SIREVAAEAQ DTEATKNDSG GTSAPKDRAA DSRSSGKPGQ LKSCLKKPPG
501: EEGPTIDGGN GSNRGTPRVK FMLGAEDNIN RDRGEQMNDI KNVNNTSSIA DGSASSSSNI NNYTSQSSML PLPTTAHYAN APNDIHFALQ APHRIAPNYN
601: NQVSAPEANF SQHMLSLLTK CSDIVTDLTN LLGYFPYNGL Q
101: VRKRSGGEVS GGSSPSTERK KKKKKVVLGL KTDSNHVDAP AAVSSDNPVM EKVARESVQV PPVSTEELQM DIQPKDDPAD SSVPDRVVTE DKVEIRSDNI
201: DLRQLLSDLH AIALDPFYGA QTRNINTIRE VFLKFRSLVY QKSLALSATV ESESSTPISK LPVAAPMSDT GPSNNVKQTS NLKPQKNPAR PDDPSTKGGR
301: KRGTSDRQEE LAAKKKKKIN DLRTLAAQKK ASGKTSEVKP GECKEIPAKK LVSTPVKSSK PDSVKKNDPA EKVPDPTMLI MKFPSNGALP SISELKARFA
401: RFGALDHSAT RVFWKSSTCR LVYQYRDHAV QAFRFASAST NLFGNTNVRC SIREVAAEAQ DTEATKNDSG GTSAPKDRAA DSRSSGKPGQ LKSCLKKPPG
501: EEGPTIDGGN GSNRGTPRVK FMLGAEDNIN RDRGEQMNDI KNVNNTSSIA DGSASSSSNI NNYTSQSSML PLPTTAHYAN APNDIHFALQ APHRIAPNYN
601: NQVSAPEANF SQHMLSLLTK CSDIVTDLTN LLGYFPYNGL Q
001: MNSAEVNVNP RVFGDSFVTF SGNGSGKFEM IDQAEAFLME LDSVAADTGS DGNGNVDLGS RVSNSETEPR FCEMKREIRD SDHRFYELCN ESGEKKMEKR
101: RVPDYKSFLS EFDDYVAREK MGSRNSKALS YGFEVGDMVW GKVKSHPWWP GQIFNEAFAS PSVRRVKKMG YVLVAFFGDN SYGWFDPAEL IPFEPHVKEK
201: SQQTSSDHFA KAVEEAMNEV GRRSALGLTC KCRNQYNFRP INAQGYFAVD VPDYEVQAIY SSKQIQKARD SFSSVQTLAF VKRCALAPQE CDTDSLKSFQ
301: KKVAVCAFRR AVFEEFDETY EQAFRARSVY CLMKTHEPLN RAPLRETLGN PKSYTKAMNV KDSTKQDKYL PKRREEAGDM TVQFGQVQES SQFQGINGSS
401: AWDRLLQRRT PCLQTPRKHE QTGLVSMNFT SSSGNIPGKK SSVSKLSRDD DKGLAQESDV RMGEKATLFP DQEKFEPMKS LKQDETGTNS RSNKSSLKLF
501: SGGKFSAGVG IKKGNVVKRS SGEMKSENCP PEPKKKKKEY VSELNRDTPD KRKALSSGEA WAKKSSQVDS AKRRSNMLIV KLDGLQLLSN LLALSLDPLF
601: GSSDRSSFRV IRQFFFHFRS HVYQKSLATS PSATKLSKSA KTLCRANEQS KAGRNRISSD SQQDVPSTKK LKKTIQFKPL ASDKKTNQDA TKRSSLAPLN
701: PVRDQCRVPI NAKPAIVQQE KKTGPSAMVV EPTMLVMMFP PGESLPSIDL LKARFGRFGQ LDQSAIRVSW KSSICRVGFL YKLDAQTALR YVSGSKSLFG
801: NVNVTYFLRD MKASSASGDH ELKKAKRPKT DKPITKPLNQ LLEQAPPVHQ PNIQLKSCLK KPGNNRNGNH RTVRVKFMLG EKETESPFSV SILPLSSQDS
901: EPKPVNNQVD HVEPPLDPSQ LKVDISLQMM ELLTRCNDAV ANVTGLLGYV PYHSL
101: RVPDYKSFLS EFDDYVAREK MGSRNSKALS YGFEVGDMVW GKVKSHPWWP GQIFNEAFAS PSVRRVKKMG YVLVAFFGDN SYGWFDPAEL IPFEPHVKEK
201: SQQTSSDHFA KAVEEAMNEV GRRSALGLTC KCRNQYNFRP INAQGYFAVD VPDYEVQAIY SSKQIQKARD SFSSVQTLAF VKRCALAPQE CDTDSLKSFQ
301: KKVAVCAFRR AVFEEFDETY EQAFRARSVY CLMKTHEPLN RAPLRETLGN PKSYTKAMNV KDSTKQDKYL PKRREEAGDM TVQFGQVQES SQFQGINGSS
401: AWDRLLQRRT PCLQTPRKHE QTGLVSMNFT SSSGNIPGKK SSVSKLSRDD DKGLAQESDV RMGEKATLFP DQEKFEPMKS LKQDETGTNS RSNKSSLKLF
501: SGGKFSAGVG IKKGNVVKRS SGEMKSENCP PEPKKKKKEY VSELNRDTPD KRKALSSGEA WAKKSSQVDS AKRRSNMLIV KLDGLQLLSN LLALSLDPLF
601: GSSDRSSFRV IRQFFFHFRS HVYQKSLATS PSATKLSKSA KTLCRANEQS KAGRNRISSD SQQDVPSTKK LKKTIQFKPL ASDKKTNQDA TKRSSLAPLN
701: PVRDQCRVPI NAKPAIVQQE KKTGPSAMVV EPTMLVMMFP PGESLPSIDL LKARFGRFGQ LDQSAIRVSW KSSICRVGFL YKLDAQTALR YVSGSKSLFG
801: NVNVTYFLRD MKASSASGDH ELKKAKRPKT DKPITKPLNQ LLEQAPPVHQ PNIQLKSCLK KPGNNRNGNH RTVRVKFMLG EKETESPFSV SILPLSSQDS
901: EPKPVNNQVD HVEPPLDPSQ LKVDISLQMM ELLTRCNDAV ANVTGLLGYV PYHSL
Arabidopsis Description
F22F7.12 protein [Source:UniProtKB/TrEMBL;Acc:Q9MA56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.