Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g086750.1.1 | Tomato | nucleus | 81.75 | 81.56 |
| CDX67453 | Canola | cytosol, nucleus, plastid | 10.92 | 32.27 |
| CDY11682 | Canola | cytosol, nucleus, plastid | 9.24 | 30.2 |
| VIT_14s0066g01120.t01 | Wine grape | nucleus | 31.09 | 26.62 |
| KRH56588 | Soybean | nucleus | 22.45 | 26.19 |
| AT3G27860.1 | Thale cress | nucleus | 18.73 | 23.93 |
| Bra025306.1-P | Field mustard | nucleus | 14.89 | 23.44 |
| CDX86465 | Canola | nucleus | 14.89 | 23.44 |
| KRH07190 | Soybean | nucleus | 26.29 | 23.37 |
| KRG94143 | Soybean | nucleus | 25.69 | 23.09 |
| CDY44440 | Canola | plastid | 15.01 | 21.4 |
| Bra028455.1-P | Field mustard | nucleus | 21.61 | 20.25 |
| AT5G40340.1 | Thale cress | nucleus | 23.77 | 19.64 |
| KRG93266 | Soybean | nucleus | 24.49 | 18.6 |
| PGSC0003DMT400063505 | Potato | nucleus | 8.28 | 18.35 |
| PGSC0003DMT400087303 | Potato | nucleus | 16.93 | 18.29 |
| PGSC0003DMT400058347 | Potato | cytosol | 11.28 | 14.22 |
| PGSC0003DMT400063506 | Potato | nucleus | 8.28 | 10.76 |
| PGSC0003DMT400027409 | Potato | nucleus | 18.97 | 9.54 |
| PGSC0003DMT400069444 | Potato | nucleus | 9.48 | 6.9 |
Protein Annotations
| EntrezGene:102594150 | Gene3D:2.30.30.140 | MapMan:35.1 | ncoils:Coil | InterPro:IPR000313 | UniProt:M0ZI84 |
| PFAM:PF00855 | EnsemblPlantsGene:PGSC0003DMG400000489 | PGSC:PGSC0003DMG400000489 | EnsemblPlants:PGSC0003DMT400001285 | PFscan:PS50812 | PANTHER:PTHR10688 |
| PANTHER:PTHR10688:SF3 | InterPro:PWWP_dom | SMART:SM00293 | SUPFAM:SSF63748 | UniParc:UPI000294A51D | RefSeq:XP_006338569.1 |
| RefSeq:XP_015162823.1 | SEG:seg | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400000489]
Coordinates
chr2:-:47118700..47122524
Molecular Weight (calculated)
91074.5 Da
IEP (calculated)
5.371
GRAVY (calculated)
-0.663
Length
833 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSDENTEKS KNLAEALDSE TLMTDSVPGL LDEVPRVSGD NGNVDTGAIS EPVVATEETS EVGNDADGDV VEVHGSLDNV SGGELASQGA EADQGPGHLV
101: EEMNGEENVA GGSDDEMVDA VDGETAEDNS GEDTMSVKHV YAVGDFVWGK IKSHPWWPGR VYDASAASDF AMKYNQTGRL LVAYFGDGSF SWCPPSQLLP
201: FVDNFEKMSK QSTSKSFLYA VEKTLDEISV LVEFQMTCQC VSEESRTGLC WPLAVNAGIK KGVQVPVSET VSLLLSQFEP AERLKSLKRN ALTNSNSNIL
301: EFTVLKSWLS AFYRAKYGHL LASYCEPLLV EGLEDKKEDQ VIDANDFSIP IEVPIQGPSE EEIPNSGSSK FPMTACDKIY QKRKQKSVAE LMGENAKPKG
401: KKTTEDDSTP SSVETSEKKR KKSGEKAKGH TGSSKSVDEK IGKRVSKKSG DSDLVKTKKL SVSIPERDEL GDQQDMNAGP LSRERKKSKY LSPPYTSPKW
501: NAGKSSFKRD LEIESQKFSD ISKIGERMTK AARLLLSSPD ANGNEAFKDD LDKSSRIRKR SPKTFDTMAI NSSVDEVLSE VQSTALNPLL LRNGSLEKAR
601: GFISTFRNSV YFDGSNYKQY HQVETGKKRK SVGSRNVISQ SDSKSPDSVP SKKRKTNHAK SEVTKLKKES GPSSQGKEDE DDGGETSSVI LLVTFLTGFS
701: LPSEDEIIRI YNKFGELNEE ETKVLCDSNS VRIVYRRGSD AAQAFKESVR QSPFGAANVN FTLSYSSKSE SPLSSLKARK GKSQVQLIKQ KLKGMSSILG
801: KCKGKITSEE KSELENEIKG LLEKVSAVIS TNP
101: EEMNGEENVA GGSDDEMVDA VDGETAEDNS GEDTMSVKHV YAVGDFVWGK IKSHPWWPGR VYDASAASDF AMKYNQTGRL LVAYFGDGSF SWCPPSQLLP
201: FVDNFEKMSK QSTSKSFLYA VEKTLDEISV LVEFQMTCQC VSEESRTGLC WPLAVNAGIK KGVQVPVSET VSLLLSQFEP AERLKSLKRN ALTNSNSNIL
301: EFTVLKSWLS AFYRAKYGHL LASYCEPLLV EGLEDKKEDQ VIDANDFSIP IEVPIQGPSE EEIPNSGSSK FPMTACDKIY QKRKQKSVAE LMGENAKPKG
401: KKTTEDDSTP SSVETSEKKR KKSGEKAKGH TGSSKSVDEK IGKRVSKKSG DSDLVKTKKL SVSIPERDEL GDQQDMNAGP LSRERKKSKY LSPPYTSPKW
501: NAGKSSFKRD LEIESQKFSD ISKIGERMTK AARLLLSSPD ANGNEAFKDD LDKSSRIRKR SPKTFDTMAI NSSVDEVLSE VQSTALNPLL LRNGSLEKAR
601: GFISTFRNSV YFDGSNYKQY HQVETGKKRK SVGSRNVISQ SDSKSPDSVP SKKRKTNHAK SEVTKLKKES GPSSQGKEDE DDGGETSSVI LLVTFLTGFS
701: LPSEDEIIRI YNKFGELNEE ETKVLCDSNS VRIVYRRGSD AAQAFKESVR QSPFGAANVN FTLSYSSKSE SPLSSLKARK GKSQVQLIKQ KLKGMSSILG
801: KCKGKITSEE KSELENEIKG LLEKVSAVIS TNP
001: MGNILPTGSR VSENEGSDDN KLKEHDVKME NVKEDSEQIG DNVRSGVSSL RDNFEELENG FHVGDFVWGE EANSQQWWPG QIYDSLDASD LALKTMQKGK
101: LLVAYFGDGS FFGWCNPLEL KPFLENFKEF SKMSDSRRFL LAVEDAVREI GEHVEKFLVC DDAALVSSVA LNLGIKDGVV VPDVRRKIIS SLVLENPGVV
201: LEDVKRLAMT VRFDDLLEIE VLRRKISAFY RCKGRFDLAK FDEHRYIIGL EDKEHESCQR LLRKCSGFAS KKRKCGDVAT TGSTTLRKKR LSEVSKIETA
301: EKEISNGKSL SSRKRKSKRG LDENDDDGIE KREESNDSNH LEESEKKDDL ATPLASICKR LNVDVSSCVK RCNGNGEAIL QTGKRERKKS KYLSPEYMTD
401: FSCRARKIKI ESAESSQIQV AVRMTTPNTA IDVVKLGATP EEMLALIRAA ALNAQYPKDY NSTSCDMVRE FVSNYRSFNN KRNLSDVEKQ PEVKQEIVDE
501: KEKTRNEPGV ELYIKTGFGS TLPSKDDLIK TYEKFGALDK ERSYMFNNNS CSCVAFVNAS DGEEAFNRSL EKCPFATTST VTFKLEYPSS ASSEKKEAET
601: RKGVTEIECL KEKLEGIRAL LDQSEGKITE ELKMKLEDES RNLLDKVRKM II
101: LLVAYFGDGS FFGWCNPLEL KPFLENFKEF SKMSDSRRFL LAVEDAVREI GEHVEKFLVC DDAALVSSVA LNLGIKDGVV VPDVRRKIIS SLVLENPGVV
201: LEDVKRLAMT VRFDDLLEIE VLRRKISAFY RCKGRFDLAK FDEHRYIIGL EDKEHESCQR LLRKCSGFAS KKRKCGDVAT TGSTTLRKKR LSEVSKIETA
301: EKEISNGKSL SSRKRKSKRG LDENDDDGIE KREESNDSNH LEESEKKDDL ATPLASICKR LNVDVSSCVK RCNGNGEAIL QTGKRERKKS KYLSPEYMTD
401: FSCRARKIKI ESAESSQIQV AVRMTTPNTA IDVVKLGATP EEMLALIRAA ALNAQYPKDY NSTSCDMVRE FVSNYRSFNN KRNLSDVEKQ PEVKQEIVDE
501: KEKTRNEPGV ELYIKTGFGS TLPSKDDLIK TYEKFGALDK ERSYMFNNNS CSCVAFVNAS DGEEAFNRSL EKCPFATTST VTFKLEYPSS ASSEKKEAET
601: RKGVTEIECL KEKLEGIRAL LDQSEGKITE ELKMKLEDES RNLLDKVRKM II
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LK91]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.