Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 1
- mitochondrion 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86465 | Canola | nucleus | 63.36 | 69.94 |
| CDX67453 | Canola | cytosol, nucleus, plastid | 19.52 | 40.43 |
| CDY11682 | Canola | cytosol, nucleus, plastid | 16.61 | 38.04 |
| AT3G27860.1 | Thale cress | nucleus | 29.45 | 26.38 |
| KRH56588 | Soybean | nucleus | 20.89 | 17.09 |
| CDY04873 | Canola | nucleus | 13.18 | 16.74 |
| CDY55692 | Canola | nucleus | 12.33 | 15.89 |
| PGSC0003DMT400001285 | Potato | nucleus | 21.4 | 15.01 |
| Solyc02g086750.1.1 | Tomato | nucleus | 20.89 | 14.61 |
| KRH07190 | Soybean | nucleus | 22.77 | 14.19 |
| KRG94143 | Soybean | nucleus | 21.92 | 13.81 |
| VIT_14s0066g01120.t01 | Wine grape | nucleus | 22.6 | 13.57 |
| CDX73990 | Canola | nucleus | 13.18 | 13.3 |
| CDY07935 | Canola | nucleus | 12.84 | 13.27 |
| KRG93266 | Soybean | nucleus | 21.58 | 11.49 |
| CDX67452 | Canola | nucleus | 9.59 | 11.22 |
| CDY11681 | Canola | nucleus | 9.42 | 11.02 |
| CDX99976 | Canola | nucleus | 14.55 | 9.08 |
| CDY19729 | Canola | nucleus | 14.73 | 8.38 |
| CDY39560 | Canola | nucleus | 5.82 | 4.03 |
| CDY48152 | Canola | nucleus | 5.99 | 3.93 |
Protein Annotations
| EnsemblPlants:CDY44440 | EnsemblPlantsGene:GSBRNA2T00080137001 | Gene3D:2.30.30.140 | InterPro:IPR000313 | InterPro:PWWP_dom | PANTHER:PTHR10688 |
| PANTHER:PTHR10688:SF3 | PFAM:PF00855 | ProteinID:CDY44440 | ProteinID:CDY44440.1 | SEG:seg | SUPFAM:SSF63748 |
| UniParc:UPI0004EED5B0 | UniProt:A0A078I0N8 | MapMan:35.2 | : | : | : |
Description
BnaC07g24780DBnaC07g24780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0N8]
Coordinates
chrLK032589:+:82025..84221
Molecular Weight (calculated)
66298.5 Da
IEP (calculated)
8.273
GRAVY (calculated)
-0.633
Length
584 amino acids
Sequence
(BLAST)
(BLAST)
001: MHSLTVGIRL LIKYITVARG KETKTFRRRK RRRNCSLQRF AILFSLLVSS DCVYEREESS RPMGNFLTTG SRVFENREES SGSSEDEPKS NDVNMESVND
101: SGPVEDYVMS EASSLLNTKQ DHSRDGFHVG DFVWVQGVNR HQWWPGKIYD SSDASDLALK QMQKGTLLVA FCWKGTFAWC TPLQLKPFLE NFRDFSKTSD
201: SSSFLSAVRE AVREIGQHVE NLLVCDDAMV CPVAVNGGVK KGVLVPDGRR EIVKSLLLEK PGIVLEDVKS LAKEASFSDV LEIEVLKRKI SAFYRWSKGR
301: FGLAKYDDEN PYIIGLEDKE DEYALKFNNS SCHRSLRKCS GLTSNKKRKH GDEVSKCSNH LEESEKKEES GIDIVVDLST PLASLCKRVK VDDVSSSGER
401: NTGSGETIVQ RGKRERKKSK YLSPEYLTDF SWSRRKSKLE SESAERMISF VSLGATTEEI LDLIRAASLS TQHSQECKSS YDMIREFASI YRSFTYVTGA
501: NYKRNGSDED KQLQVKVNKR ETPENTNEKK GVTDLEWLKK KLEKMRALLD ESEGGEVTVE LKMKLEEESR NLLDKVRKMT VCSS
101: SGPVEDYVMS EASSLLNTKQ DHSRDGFHVG DFVWVQGVNR HQWWPGKIYD SSDASDLALK QMQKGTLLVA FCWKGTFAWC TPLQLKPFLE NFRDFSKTSD
201: SSSFLSAVRE AVREIGQHVE NLLVCDDAMV CPVAVNGGVK KGVLVPDGRR EIVKSLLLEK PGIVLEDVKS LAKEASFSDV LEIEVLKRKI SAFYRWSKGR
301: FGLAKYDDEN PYIIGLEDKE DEYALKFNNS SCHRSLRKCS GLTSNKKRKH GDEVSKCSNH LEESEKKEES GIDIVVDLST PLASLCKRVK VDDVSSSGER
401: NTGSGETIVQ RGKRERKKSK YLSPEYLTDF SWSRRKSKLE SESAERMISF VSLGATTEEI LDLIRAASLS TQHSQECKSS YDMIREFASI YRSFTYVTGA
501: NYKRNGSDED KQLQVKVNKR ETPENTNEKK GVTDLEWLKK KLEKMRALLD ESEGGEVTVE LKMKLEEESR NLLDKVRKMT VCSS
001: MGNILPTGSR VSENEGSDDN KLKEHDVKME NVKEDSEQIG DNVRSGVSSL RDNFEELENG FHVGDFVWGE EANSQQWWPG QIYDSLDASD LALKTMQKGK
101: LLVAYFGDGS FFGWCNPLEL KPFLENFKEF SKMSDSRRFL LAVEDAVREI GEHVEKFLVC DDAALVSSVA LNLGIKDGVV VPDVRRKIIS SLVLENPGVV
201: LEDVKRLAMT VRFDDLLEIE VLRRKISAFY RCKGRFDLAK FDEHRYIIGL EDKEHESCQR LLRKCSGFAS KKRKCGDVAT TGSTTLRKKR LSEVSKIETA
301: EKEISNGKSL SSRKRKSKRG LDENDDDGIE KREESNDSNH LEESEKKDDL ATPLASICKR LNVDVSSCVK RCNGNGEAIL QTGKRERKKS KYLSPEYMTD
401: FSCRARKIKI ESAESSQIQV AVRMTTPNTA IDVVKLGATP EEMLALIRAA ALNAQYPKDY NSTSCDMVRE FVSNYRSFNN KRNLSDVEKQ PEVKQEIVDE
501: KEKTRNEPGV ELYIKTGFGS TLPSKDDLIK TYEKFGALDK ERSYMFNNNS CSCVAFVNAS DGEEAFNRSL EKCPFATTST VTFKLEYPSS ASSEKKEAET
601: RKGVTEIECL KEKLEGIRAL LDQSEGKITE ELKMKLEDES RNLLDKVRKM II
101: LLVAYFGDGS FFGWCNPLEL KPFLENFKEF SKMSDSRRFL LAVEDAVREI GEHVEKFLVC DDAALVSSVA LNLGIKDGVV VPDVRRKIIS SLVLENPGVV
201: LEDVKRLAMT VRFDDLLEIE VLRRKISAFY RCKGRFDLAK FDEHRYIIGL EDKEHESCQR LLRKCSGFAS KKRKCGDVAT TGSTTLRKKR LSEVSKIETA
301: EKEISNGKSL SSRKRKSKRG LDENDDDGIE KREESNDSNH LEESEKKDDL ATPLASICKR LNVDVSSCVK RCNGNGEAIL QTGKRERKKS KYLSPEYMTD
401: FSCRARKIKI ESAESSQIQV AVRMTTPNTA IDVVKLGATP EEMLALIRAA ALNAQYPKDY NSTSCDMVRE FVSNYRSFNN KRNLSDVEKQ PEVKQEIVDE
501: KEKTRNEPGV ELYIKTGFGS TLPSKDDLIK TYEKFGALDK ERSYMFNNNS CSCVAFVNAS DGEEAFNRSL EKCPFATTST VTFKLEYPSS ASSEKKEAET
601: RKGVTEIECL KEKLEGIRAL LDQSEGKITE ELKMKLEDES RNLLDKVRKM II
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LK91]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.