Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67453 | Canola | cytosol, nucleus, plastid | 10.07 | 34.75 |
| CDY11682 | Canola | cytosol, nucleus, plastid | 8.63 | 32.94 |
| PGSC0003DMT400001285 | Potato | nucleus | 26.62 | 31.09 |
| KRH56588 | Soybean | nucleus | 21.79 | 29.69 |
| Solyc02g086750.1.1 | Tomato | nucleus | 25.39 | 29.58 |
| KRG94143 | Soybean | nucleus | 26.41 | 27.72 |
| KRH07190 | Soybean | nucleus | 26.31 | 27.32 |
| Bra025306.1-P | Field mustard | nucleus | 13.87 | 25.52 |
| CDX86465 | Canola | nucleus | 13.87 | 25.52 |
| AT3G27860.1 | Thale cress | nucleus | 17.06 | 25.46 |
| Bra028455.1-P | Field mustard | nucleus | 21.48 | 23.51 |
| AT5G40340.1 | Thale cress | nucleus | 24.05 | 23.21 |
| CDY44440 | Canola | plastid | 13.57 | 22.6 |
| KRG93266 | Soybean | nucleus | 23.12 | 20.51 |
| VIT_08s0040g02440.t01 | Wine grape | nucleus | 17.78 | 19.48 |
| VIT_14s0060g02400.t01 | Wine grape | nucleus | 16.24 | 12.63 |
| VIT_13s0019g03620.t01 | Wine grape | nucleus | 18.09 | 9.38 |
| VIT_17s0000g08510.t01 | Wine grape | nucleus | 4.93 | 3.88 |
Protein Annotations
| EntrezGene:100267992 | wikigene:100267992 | Gene3D:2.30.30.140 | MapMan:35.1 | ProteinID:CCB58506 | ProteinID:CCB58506.1 |
| UniProt:F6HUY8 | EMBL:FN596252 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR000313 |
| EntrezGene:LOC100267992 | wikigene:LOC100267992 | PFAM:PF00855 | PFscan:PS50812 | PANTHER:PTHR42851 | PANTHER:PTHR42851:SF6 |
| InterPro:PWWP_dom | InterPro:RBD_domain_sf | SMART:SM00293 | SUPFAM:SSF54928 | SUPFAM:SSF63748 | UniParc:UPI00015CA1A6 |
| ArrayExpress:VIT_14s0066g01120 | EnsemblPlantsGene:VIT_14s0066g01120 | EnsemblPlants:VIT_14s0066g01120.t01 | unigene:Vvi.6214 | RefSeq:XP_002274197 | RefSeq:XP_002274197.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr14:+:27607150..27610670
Molecular Weight (calculated)
106663.0 Da
IEP (calculated)
8.381
GRAVY (calculated)
-0.867
Length
973 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIVSESCGV SGPDKPQAPK EKALKEISLI SGSGRQENGV RVSVTTPEVE TEVSIKRIFG EGNEDISFGD KEDVVSCSVT KESEKEGVDS VLGVDHNEEN
101: VDERMAPKDG SLGLSGDASG GKVDCHDNGI SLVVEVHGSS SSKEGRSSKI DSKKGQNLGK KSGYGDKDGS MHENEGNPGE KIKEMDGSNP ELMGDKNGEV
201: DEDMGDGEYQ YSVGDFVWGK IKSHPWWPGQ IYDPKDASKH ATKYSQRDRL LVAYFGDGTF AWCYPSQLKP FEENFIEMSK QSNSRSFLKA VEEALAEIGR
301: HVELEMTCSC TPKEIRIGLS RPLTVNAGVK EGAVMPEGGI RKFSVAHFEP AEFLSGLKCI GQVVSVTSML EFSVLKSQMS AFFRSKGPHH QLAVYHEPQE
401: IAGLEEKVGN GVTKTSDLGG PVEVPIQGPC EDDWLSMPVS PSFGKTSRTL LHKATGSEDK LYQRRKQKSM AEIMRGNGDV EPKNEETDMG KEDINSVKLA
501: TASEKKRRKK GGNEAESHVV NSNLASPRGR RKKSRLSGSP VTSEDRALSV ESDGSEGKRE SENSPVSRER KKKGLSVEND GGRLPEESEQ TSVSRERKKS
601: KYLCPPYTNV IRMHRNSGSM GDSKTEFLEV SNVAGKGERS SRAAGQSVGS PTILKCSSET TYQNKDSKEH QTPKQNRNKV IDLKEIRISL QEVLSGIRSA
701: ALNPFYLREN KSVDKISGFL SAFRSAIYHD GSNYKMFNKH GPGRKRKRQE SEPGSSREDL KQNDHNSSKQ ARRSRKNETA EPDGPELKQA AAGKSDTKTK
801: HKDKDKKVES ATLLLSFGPG ISLPSKDDLI KIFSKFGTLN ESETEILYDS FCARVVFSRS SDAEEAFNGS QKASPFGAEQ VTYRLRYPSS STSRRTPDKK
901: HHPPNKKAGK APANPSAGGE KSQLNFIKQK LEMMTCMLEK SSGKMSGEMK SNLEGEMKGL LEKVSTMAET SSS
101: VDERMAPKDG SLGLSGDASG GKVDCHDNGI SLVVEVHGSS SSKEGRSSKI DSKKGQNLGK KSGYGDKDGS MHENEGNPGE KIKEMDGSNP ELMGDKNGEV
201: DEDMGDGEYQ YSVGDFVWGK IKSHPWWPGQ IYDPKDASKH ATKYSQRDRL LVAYFGDGTF AWCYPSQLKP FEENFIEMSK QSNSRSFLKA VEEALAEIGR
301: HVELEMTCSC TPKEIRIGLS RPLTVNAGVK EGAVMPEGGI RKFSVAHFEP AEFLSGLKCI GQVVSVTSML EFSVLKSQMS AFFRSKGPHH QLAVYHEPQE
401: IAGLEEKVGN GVTKTSDLGG PVEVPIQGPC EDDWLSMPVS PSFGKTSRTL LHKATGSEDK LYQRRKQKSM AEIMRGNGDV EPKNEETDMG KEDINSVKLA
501: TASEKKRRKK GGNEAESHVV NSNLASPRGR RKKSRLSGSP VTSEDRALSV ESDGSEGKRE SENSPVSRER KKKGLSVEND GGRLPEESEQ TSVSRERKKS
601: KYLCPPYTNV IRMHRNSGSM GDSKTEFLEV SNVAGKGERS SRAAGQSVGS PTILKCSSET TYQNKDSKEH QTPKQNRNKV IDLKEIRISL QEVLSGIRSA
701: ALNPFYLREN KSVDKISGFL SAFRSAIYHD GSNYKMFNKH GPGRKRKRQE SEPGSSREDL KQNDHNSSKQ ARRSRKNETA EPDGPELKQA AAGKSDTKTK
801: HKDKDKKVES ATLLLSFGPG ISLPSKDDLI KIFSKFGTLN ESETEILYDS FCARVVFSRS SDAEEAFNGS QKASPFGAEQ VTYRLRYPSS STSRRTPDKK
901: HHPPNKKAGK APANPSAGGE KSQLNFIKQK LEMMTCMLEK SSGKMSGEMK SNLEGEMKGL LEKVSTMAET SSS
0001: MEIEVVLGIG EDAGPKPCSA EIESAEKTLK DDGVVQENGV RVSDNGEKKS DVVVDVDEKN EKNLNESGVI EDCVMNGVSS LLKLKEDVEE EEEEEEEEEE
0101: EEEDGEDEEE EEEEEEEEEE EEHGYCVGDF VWGKIKNHPW WPGQIYDPSD ASDLALKIKQ KGKLLVACFG DGTFAWCGAS QLKPFAESFK ECSKVSNSRS
0201: FLGAVEEAVE EIGRHIERVL VCDCAEEKKH EFDSPLVNNA GIKEGVLVRD VRREMISSLL IGKHGEILKD VKSFAETVSF SGLLELEILK RKVSAFYRSN
0301: RGYGLTEYHE PQSVPGLEDK NNDDDDDDEE KNVNDGLQWR AKRSRVEEVA ALDHEESSSL QRSLEKCSGF PDHRLPHRRK EKSITEIIEK ESAAKVRFET
0401: EPADGDVKSN VKSGRKKTKR HDEVNGDLEN VTTTALWRRR KSEVATIEDG GNKQVVESSK GKTSRKKKKM DVDDGDDDGS GDKEESEEKE ISDLEINIDS
0501: TSLASLRKKV RFDDSVVERS TENGETATQT SKRERKKSKY LSPDFLSDFS RKGRKKSTIE SESSKVSSQS QVDERVTDAS DSLMEVEEDT LDKPCEPSSD
0601: NGLGQEELSR ELSNAVDFLR LGATPKEMQD LIRVAALGTQ YPKDSSSRDM VREFMTIYRS FTYHDGANHK FLGSYDSSDK EKEELSEMGK PVTKGKEKKD
0701: KKGKAKQKAE EIEVTGKEEN ETDKHGKMKK ERKRKKSESK KEGGEGEETQ KEANESTKKE RKRKKSESKK QSDGEEETQK EPSESTKKER KRKNPESKKK
0801: AEAVEEEETR KESVESTKKE RKRKKPKHDE EEVPNETEKP EKKKKKKREG KSKKKETETE FSGAELYVTF GPGSSLPKKE DLIEIYEKFG ALDKERTDTV
0901: DNNFSAHVAF LDVADGEKAF ESSLEKCPFT SNSTVKFRLK YPNERTEEKK TEAEVAETTM EVEYLKKKLD EMKLLLDGCE GGMTEEVKVK LEGEMVNLLE
1001: KVIEMRSS
0101: EEEDGEDEEE EEEEEEEEEE EEHGYCVGDF VWGKIKNHPW WPGQIYDPSD ASDLALKIKQ KGKLLVACFG DGTFAWCGAS QLKPFAESFK ECSKVSNSRS
0201: FLGAVEEAVE EIGRHIERVL VCDCAEEKKH EFDSPLVNNA GIKEGVLVRD VRREMISSLL IGKHGEILKD VKSFAETVSF SGLLELEILK RKVSAFYRSN
0301: RGYGLTEYHE PQSVPGLEDK NNDDDDDDEE KNVNDGLQWR AKRSRVEEVA ALDHEESSSL QRSLEKCSGF PDHRLPHRRK EKSITEIIEK ESAAKVRFET
0401: EPADGDVKSN VKSGRKKTKR HDEVNGDLEN VTTTALWRRR KSEVATIEDG GNKQVVESSK GKTSRKKKKM DVDDGDDDGS GDKEESEEKE ISDLEINIDS
0501: TSLASLRKKV RFDDSVVERS TENGETATQT SKRERKKSKY LSPDFLSDFS RKGRKKSTIE SESSKVSSQS QVDERVTDAS DSLMEVEEDT LDKPCEPSSD
0601: NGLGQEELSR ELSNAVDFLR LGATPKEMQD LIRVAALGTQ YPKDSSSRDM VREFMTIYRS FTYHDGANHK FLGSYDSSDK EKEELSEMGK PVTKGKEKKD
0701: KKGKAKQKAE EIEVTGKEEN ETDKHGKMKK ERKRKKSESK KEGGEGEETQ KEANESTKKE RKRKKSESKK QSDGEEETQK EPSESTKKER KRKNPESKKK
0801: AEAVEEEETR KESVESTKKE RKRKKPKHDE EEVPNETEKP EKKKKKKREG KSKKKETETE FSGAELYVTF GPGSSLPKKE DLIEIYEKFG ALDKERTDTV
0901: DNNFSAHVAF LDVADGEKAF ESSLEKCPFT SNSTVKFRLK YPNERTEEKK TEAEVAETTM EVEYLKKKLD EMKLLLDGCE GGMTEEVKVK LEGEMVNLLE
1001: KVIEMRSS
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FNE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.