Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11681 | Canola | nucleus | 3.07 | 7.62 |
| Bra018079.1-P | Field mustard | nucleus | 5.18 | 7.17 |
| KRG90051 | Soybean | nucleus | 4.37 | 7.01 |
| CDX67452 | Canola | nucleus | 2.67 | 6.61 |
| PGSC0003DMT400069444 | Potato | nucleus | 5.74 | 6.2 |
| Solyc06g071490.1.1 | Tomato | nucleus | 5.66 | 6.17 |
| VIT_08s0040g02440.t01 | Wine grape | nucleus | 4.37 | 6.08 |
| KRH17636 | Soybean | nucleus | 3.56 | 5.9 |
| AT3G48187.1 | Thale cress | nucleus | 3.64 | 5.32 |
| VIT_14s0066g01120.t01 | Wine grape | nucleus | 3.88 | 4.93 |
| VIT_14s0060g02400.t01 | Wine grape | nucleus | 3.4 | 3.36 |
| VIT_13s0019g03620.t01 | Wine grape | nucleus | 4.37 | 2.88 |
| TraesCS3A01G538200.1 | Wheat | nucleus | 1.29 | 1.02 |
Protein Annotations
| ArrayExpress:VIT_17s0000g08510 | EMBL:FN594950 | EnsemblPlants:VIT_17s0000g08510.t01 | EnsemblPlantsGene:VIT_17s0000g08510 | EntrezGene:104882283 | Gene3D:2.30.30.140 |
| InterPro:IPR000313 | InterPro:PWWP_dom | PANTHER:PTHR42851 | PANTHER:PTHR42851:SF6 | PFAM:PF00855 | PFscan:PS50812 |
| ProteinID:CCB42975 | ProteinID:CCB42975.1 | RefSeq:XP_010663170.1 | SEG:seg | SMART:SM00293 | SUPFAM:SSF63748 |
| unigene:Vvi.3198 | UniParc:UPI000198529E | UniProt:F6GSM8 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr17:-:9722879..9726791
Molecular Weight (calculated)
133355.0 Da
IEP (calculated)
7.426
GRAVY (calculated)
-0.601
Length
1236 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGEKPNAPKT LAEDPGAKAL EEASGSFGFS ESPTGSVSVL VEKNGGSADV DDKDNGVSNV VVATLAGTEK CLGVGQTEKC CLLNEGVVVE TKVHGASDSV
0101: ESQIVLPQNN EVSVEGDTSL SEVGRIGNGD EKSGIEKMVM DEEMKDCPMS PLDGVESPKK IEVSGDGISL VVEVSGPPSG VIGDNLDEAN CSGLEVDAKK
0201: TKESGNKEGE AIDNQDCKFS IGDLVWVKTK SESWWPGQIC DPMDVSKYVA KCSSGHSFLV GYFGNGKFDW CSPSQLKPLH EDFEQMSGQT NSRSFLGAVE
0301: KAVNEIGRHV KLEMTCSCIL KKSRTELPSL LAGNSGVKEE LSVPEHKMCD LVAPFEPAKF LAHLKNLARV VSMSSMLEFA VLKSRLSAFY CSIGHCQLSM
0401: RQLRGTNDIE DSAGDELTAR SNVDDQIREQ NQDGFGKTPS TSLQKESENL QDKVSHTKKT VGPAKISRQD MDVVQENHRK DVAEEEIISN NPPSKTRKRK
0501: KRGGFQVRKE CHEAEDVGKL ASSSEEAGLS RSPTTMENKA SNVRDGDSGT GTKSEKGVES RERKKSKYLS PPYINLNWGR KGPVLEDSET EDPKVPKVSC
0601: AGVGMNEASE QLGAPPPIVK CSGKAQKKRS RKSVSEGNTS GDVDSINASS AVMLSELRFA ALDCLYPSER KNFVSIERFF HRFRCSMYSE ASQCKMYENN
0701: ISGEKEALAA EPSSLEKGPL EIKLPIKPEP KKRKKKEKVT LKHLAELTAG IPDASGNHVK SSLLGKDSAG DELRGVNGHS HNMQEMSCQS SKGKPGRKMM
0801: KKKEGTNSKR SKTKPTPGLL DVNVGIVTSS SLINDSGEVK PLAPNGKPEP NKRKKEGATS ERLHMKFTAG IPDLNRNSPV PSPSVEDLQV MSTVALDVNG
0901: NNAKPSPSMK DLPGMGLHSL GVIPELNGRE GKEGASSNGE FTVSLPEVNG NIAKFSLMVE DSQVTSLLAP GGKLKPRKRK RKEKAMMECP EINCAASIPD
1001: LNGNSAEPSS TEKHLLEINC LSSKVKPERK KRRRKGEVGN KIVGGMLDIN MNYNKVANTA EALGTTLTLT FAQGSPMPSK EALVEAFFKF GPLKESETEV
1101: LKDSPGAQVV FIRYSDAREA FQSLEKCSPF GPALVNYQLN HSSAASMALE QDRNQPAALA SQPVESLKTP ARSSGSKPPI GEARPLFFIR QNLEMMTSML
1201: EKSGDNLSPE MRAKLEGEIK GLLKKVSTMV GSSSSS
0101: ESQIVLPQNN EVSVEGDTSL SEVGRIGNGD EKSGIEKMVM DEEMKDCPMS PLDGVESPKK IEVSGDGISL VVEVSGPPSG VIGDNLDEAN CSGLEVDAKK
0201: TKESGNKEGE AIDNQDCKFS IGDLVWVKTK SESWWPGQIC DPMDVSKYVA KCSSGHSFLV GYFGNGKFDW CSPSQLKPLH EDFEQMSGQT NSRSFLGAVE
0301: KAVNEIGRHV KLEMTCSCIL KKSRTELPSL LAGNSGVKEE LSVPEHKMCD LVAPFEPAKF LAHLKNLARV VSMSSMLEFA VLKSRLSAFY CSIGHCQLSM
0401: RQLRGTNDIE DSAGDELTAR SNVDDQIREQ NQDGFGKTPS TSLQKESENL QDKVSHTKKT VGPAKISRQD MDVVQENHRK DVAEEEIISN NPPSKTRKRK
0501: KRGGFQVRKE CHEAEDVGKL ASSSEEAGLS RSPTTMENKA SNVRDGDSGT GTKSEKGVES RERKKSKYLS PPYINLNWGR KGPVLEDSET EDPKVPKVSC
0601: AGVGMNEASE QLGAPPPIVK CSGKAQKKRS RKSVSEGNTS GDVDSINASS AVMLSELRFA ALDCLYPSER KNFVSIERFF HRFRCSMYSE ASQCKMYENN
0701: ISGEKEALAA EPSSLEKGPL EIKLPIKPEP KKRKKKEKVT LKHLAELTAG IPDASGNHVK SSLLGKDSAG DELRGVNGHS HNMQEMSCQS SKGKPGRKMM
0801: KKKEGTNSKR SKTKPTPGLL DVNVGIVTSS SLINDSGEVK PLAPNGKPEP NKRKKEGATS ERLHMKFTAG IPDLNRNSPV PSPSVEDLQV MSTVALDVNG
0901: NNAKPSPSMK DLPGMGLHSL GVIPELNGRE GKEGASSNGE FTVSLPEVNG NIAKFSLMVE DSQVTSLLAP GGKLKPRKRK RKEKAMMECP EINCAASIPD
1001: LNGNSAEPSS TEKHLLEINC LSSKVKPERK KRRRKGEVGN KIVGGMLDIN MNYNKVANTA EALGTTLTLT FAQGSPMPSK EALVEAFFKF GPLKESETEV
1101: LKDSPGAQVV FIRYSDAREA FQSLEKCSPF GPALVNYQLN HSSAASMALE QDRNQPAALA SQPVESLKTP ARSSGSKPPI GEARPLFFIR QNLEMMTSML
1201: EKSGDNLSPE MRAKLEGEIK GLLKKVSTMV GSSSSS
0001: MEIEVVLGIG EDAGPKPCSA EIESAEKTLK DDGVVQENGV RVSDNGEKKS DVVVDVDEKN EKNLNESGVI EDCVMNGVSS LLKLKEDVEE EEEEEEEEEE
0101: EEEDGEDEEE EEEEEEEEEE EEHGYCVGDF VWGKIKNHPW WPGQIYDPSD ASDLALKIKQ KGKLLVACFG DGTFAWCGAS QLKPFAESFK ECSKVSNSRS
0201: FLGAVEEAVE EIGRHIERVL VCDCAEEKKH EFDSPLVNNA GIKEGVLVRD VRREMISSLL IGKHGEILKD VKSFAETVSF SGLLELEILK RKVSAFYRSN
0301: RGYGLTEYHE PQSVPGLEDK NNDDDDDDEE KNVNDGLQWR AKRSRVEEVA ALDHEESSSL QRSLEKCSGF PDHRLPHRRK EKSITEIIEK ESAAKVRFET
0401: EPADGDVKSN VKSGRKKTKR HDEVNGDLEN VTTTALWRRR KSEVATIEDG GNKQVVESSK GKTSRKKKKM DVDDGDDDGS GDKEESEEKE ISDLEINIDS
0501: TSLASLRKKV RFDDSVVERS TENGETATQT SKRERKKSKY LSPDFLSDFS RKGRKKSTIE SESSKVSSQS QVDERVTDAS DSLMEVEEDT LDKPCEPSSD
0601: NGLGQEELSR ELSNAVDFLR LGATPKEMQD LIRVAALGTQ YPKDSSSRDM VREFMTIYRS FTYHDGANHK FLGSYDSSDK EKEELSEMGK PVTKGKEKKD
0701: KKGKAKQKAE EIEVTGKEEN ETDKHGKMKK ERKRKKSESK KEGGEGEETQ KEANESTKKE RKRKKSESKK QSDGEEETQK EPSESTKKER KRKNPESKKK
0801: AEAVEEEETR KESVESTKKE RKRKKPKHDE EEVPNETEKP EKKKKKKREG KSKKKETETE FSGAELYVTF GPGSSLPKKE DLIEIYEKFG ALDKERTDTV
0901: DNNFSAHVAF LDVADGEKAF ESSLEKCPFT SNSTVKFRLK YPNERTEEKK TEAEVAETTM EVEYLKKKLD EMKLLLDGCE GGMTEEVKVK LEGEMVNLLE
1001: KVIEMRSS
0101: EEEDGEDEEE EEEEEEEEEE EEHGYCVGDF VWGKIKNHPW WPGQIYDPSD ASDLALKIKQ KGKLLVACFG DGTFAWCGAS QLKPFAESFK ECSKVSNSRS
0201: FLGAVEEAVE EIGRHIERVL VCDCAEEKKH EFDSPLVNNA GIKEGVLVRD VRREMISSLL IGKHGEILKD VKSFAETVSF SGLLELEILK RKVSAFYRSN
0301: RGYGLTEYHE PQSVPGLEDK NNDDDDDDEE KNVNDGLQWR AKRSRVEEVA ALDHEESSSL QRSLEKCSGF PDHRLPHRRK EKSITEIIEK ESAAKVRFET
0401: EPADGDVKSN VKSGRKKTKR HDEVNGDLEN VTTTALWRRR KSEVATIEDG GNKQVVESSK GKTSRKKKKM DVDDGDDDGS GDKEESEEKE ISDLEINIDS
0501: TSLASLRKKV RFDDSVVERS TENGETATQT SKRERKKSKY LSPDFLSDFS RKGRKKSTIE SESSKVSSQS QVDERVTDAS DSLMEVEEDT LDKPCEPSSD
0601: NGLGQEELSR ELSNAVDFLR LGATPKEMQD LIRVAALGTQ YPKDSSSRDM VREFMTIYRS FTYHDGANHK FLGSYDSSDK EKEELSEMGK PVTKGKEKKD
0701: KKGKAKQKAE EIEVTGKEEN ETDKHGKMKK ERKRKKSESK KEGGEGEETQ KEANESTKKE RKRKKSESKK QSDGEEETQK EPSESTKKER KRKNPESKKK
0801: AEAVEEEETR KESVESTKKE RKRKKPKHDE EEVPNETEKP EKKKKKKREG KSKKKETETE FSGAELYVTF GPGSSLPKKE DLIEIYEKFG ALDKERTDTV
0901: DNNFSAHVAF LDVADGEKAF ESSLEKCPFT SNSTVKFRLK YPNERTEEKK TEAEVAETTM EVEYLKKKLD EMKLLLDGCE GGMTEEVKVK LEGEMVNLLE
1001: KVIEMRSS
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FNE4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.