Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39560 | Canola | nucleus | 68.2 | 72.24 |
| AT3G48187.1 | Thale cress | nucleus | 31.47 | 33.22 |
| Solyc06g071490.1.1 | Tomato | nucleus | 17.69 | 13.92 |
| PGSC0003DMT400069444 | Potato | nucleus | 17.69 | 13.8 |
| KRH17636 | Soybean | nucleus | 9.97 | 11.93 |
| KRG90051 | Soybean | nucleus | 9.07 | 10.52 |
| Bra028857.1-P | Field mustard | nucleus | 5.04 | 9.78 |
| Bra028455.1-P | Field mustard | nucleus | 7.73 | 7.76 |
| Bra001301.1-P | Field mustard | nucleus | 2.46 | 6.51 |
| Bra036620.1-P | Field mustard | nucleus | 7.5 | 6.5 |
| Bra025306.1-P | Field mustard | nucleus | 3.58 | 6.05 |
| VIT_17s0000g08510.t01 | Wine grape | nucleus | 7.17 | 5.18 |
| TraesCS3A01G538200.1 | Wheat | nucleus | 1.57 | 0.9 |
Protein Annotations
Description
AT3G48190 (E=2e-250) ATM, ATATM | ATM (ATAXIA-TELANGIECTASIA MUTATED); 1-phosphatidylinositol-3-phosphate 5-kinase
Coordinates
chrA06:-:10043600..10054397
Molecular Weight (calculated)
98032.4 Da
IEP (calculated)
8.683
GRAVY (calculated)
-0.496
Length
893 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFLPNAVCP SKPQENLSHT HRGYDGQSAR VVGLSIPNAA VETVLQAIIP GLIQKPSQTI YGTRVEQLRR IRKESLSDDD DDDDEAEDST MKALMEEDDE
101: CFPLGGGDKV RKIEVSGGNI SLVVDFSGSL TGTSSHNAFE SNVSCLKENQ TQECLVGNLV WAMTKSKKWW PGEVVGYKAD AKESCFMVRY LGEGQLESWC
201: APSKLRPFKE SFERLVSQRN DVGFFVAVEE AMTLLRNSLR LEMTCSCMSE RNGKKPARKA KPLILREFSV DRLEPKEFVT QLKNLAGCVS SGGILEATVM
301: QSRLSAFYSF CGHKQIPMDL LNQNEARRSF NGSKMEESEF VGSPSVVAGS SRRKFRKEWF RKFVSEVDYV SAREDLVDTS PSDLVSKLKL LAVDSSTCSE
401: ETENVGLFEW FFSKFRISVF HDENSYRMQL ANMAGLNDLM VAKAAISKSK NVGKSKVEPF CGVSVAGAEQ KTLESQKISE KSKIEVTGVA NTEQKTFKLQ
501: KNSEKSKIEV VGGVSVADAD QKAFESNTRA EKYRTYQRAS KPKIPGLKTI KDTISRSDIS SSVANEPSLQ GKACMADTLS RPAATLVPDL NGGGNGLASA
601: ESDHLQKPET LVPPSALPQK ERPFSMMLNF QAAAASTAAP RSNYGISGTG YVSSLTDLER KFTSADLCAK VTGTEKKKRG RKRKNPEAAH ATNGIPDLNG
701: TTKEPASVPP QAEPTQRRKR RKKEEMPNRS TRGITVLVLK FSSKESMPSK DDLTSTFSAF GPLDASETHV YEELSGAEVA FVSSGDAVEA VKSLDKANPF
801: GENLVSFRLQ QKLINVYRNI APRMPEISHV SPLQKPKNAP ISVESMKQNL MMMTSMLDKS GDHLSRDTKA KLKSDISALL EKISSMPSSS SSS
101: CFPLGGGDKV RKIEVSGGNI SLVVDFSGSL TGTSSHNAFE SNVSCLKENQ TQECLVGNLV WAMTKSKKWW PGEVVGYKAD AKESCFMVRY LGEGQLESWC
201: APSKLRPFKE SFERLVSQRN DVGFFVAVEE AMTLLRNSLR LEMTCSCMSE RNGKKPARKA KPLILREFSV DRLEPKEFVT QLKNLAGCVS SGGILEATVM
301: QSRLSAFYSF CGHKQIPMDL LNQNEARRSF NGSKMEESEF VGSPSVVAGS SRRKFRKEWF RKFVSEVDYV SAREDLVDTS PSDLVSKLKL LAVDSSTCSE
401: ETENVGLFEW FFSKFRISVF HDENSYRMQL ANMAGLNDLM VAKAAISKSK NVGKSKVEPF CGVSVAGAEQ KTLESQKISE KSKIEVTGVA NTEQKTFKLQ
501: KNSEKSKIEV VGGVSVADAD QKAFESNTRA EKYRTYQRAS KPKIPGLKTI KDTISRSDIS SSVANEPSLQ GKACMADTLS RPAATLVPDL NGGGNGLASA
601: ESDHLQKPET LVPPSALPQK ERPFSMMLNF QAAAASTAAP RSNYGISGTG YVSSLTDLER KFTSADLCAK VTGTEKKKRG RKRKNPEAAH ATNGIPDLNG
701: TTKEPASVPP QAEPTQRRKR RKKEEMPNRS TRGITVLVLK FSSKESMPSK DDLTSTFSAF GPLDASETHV YEELSGAEVA FVSSGDAVEA VKSLDKANPF
801: GENLVSFRLQ QKLINVYRNI APRMPEISHV SPLQKPKNAP ISVESMKQNL MMMTSMLDKS GDHLSRDTKA KLKSDISALL EKISSMPSSS SSS
001: MKLQNPDKKT LREGFSQESS VVALDSGVLA MSGLKCDGKF PVKDVLMEEG GDKVRKIQVS GGNISLVVDF SGARTSSNNF FESNASCVNE NLVKGNGYRE
101: DETQEFLVGN LVWVMTKYKK WWPGEVVDFK ADAKESFMVR SIGQSHLVSW FASSKLKPFK ESFEQVLNQR NDNGFFDALQ KAMSLLSNSL KLDMTCSCIA
201: DGNGIVSAQN ITTRKNKPLI LREFSVDRLE PKEFVTQLKN IAKCVLNAGV LESTVMQSQL SAFYTLFGHK QIPMAQLHEN EGRKSFTAKM SDSKFIGSPS
301: ICAGNSRKRF RKEWFRKFVS EVDNVSARDD LVNVPPSDLI SKLKLLAVGY NCSEETENIG LFEWFFSKFR ISVYHDENAY KMQLANMAGF KDLMLATNAN
401: RGTVQKTLKS KKIGKSKMEP LNGVSVADTE QKTFELQISK KSNIESLNGV SVADTEQKTF ELQILEKSNI ESLNGVSTPN IDHEASKSNN SGKTKINHII
501: GHSNFPSSVA KVQLAKDFQD KLLVQAPDRK AMTADTLSRP AAILVPDLNS GGNALGTAEF DHMQRPETLI QHNVCPQEEK TPRSTILNFQ VTAHQGVSGT
601: QFVSSQPTSY KHFTSADLFT YSGKKKRGRK RKNAEELPIV AHASATTGIP DLNGTNTEPT LVLPQVEPTQ RRRRRKKEES PNGLTRGITI LFLKFSSQVS
701: MPSRDDLTST FSAFGPLDSS ETHVSEEFSG AQVAFVSSAD AIEAVKSLEK ANPFGETLVN FRLQQKLITV QRNIAPRMPV ISHVSPVPKP NNIPTSMDAM
801: RQNLLMMTAM LEKSGDSLSR ETKAKLKSEI TGLLEKVSSI PSSSSS
101: DETQEFLVGN LVWVMTKYKK WWPGEVVDFK ADAKESFMVR SIGQSHLVSW FASSKLKPFK ESFEQVLNQR NDNGFFDALQ KAMSLLSNSL KLDMTCSCIA
201: DGNGIVSAQN ITTRKNKPLI LREFSVDRLE PKEFVTQLKN IAKCVLNAGV LESTVMQSQL SAFYTLFGHK QIPMAQLHEN EGRKSFTAKM SDSKFIGSPS
301: ICAGNSRKRF RKEWFRKFVS EVDNVSARDD LVNVPPSDLI SKLKLLAVGY NCSEETENIG LFEWFFSKFR ISVYHDENAY KMQLANMAGF KDLMLATNAN
401: RGTVQKTLKS KKIGKSKMEP LNGVSVADTE QKTFELQISK KSNIESLNGV SVADTEQKTF ELQILEKSNI ESLNGVSTPN IDHEASKSNN SGKTKINHII
501: GHSNFPSSVA KVQLAKDFQD KLLVQAPDRK AMTADTLSRP AAILVPDLNS GGNALGTAEF DHMQRPETLI QHNVCPQEEK TPRSTILNFQ VTAHQGVSGT
601: QFVSSQPTSY KHFTSADLFT YSGKKKRGRK RKNAEELPIV AHASATTGIP DLNGTNTEPT LVLPQVEPTQ RRRRRKKEES PNGLTRGITI LFLKFSSQVS
701: MPSRDDLTST FSAFGPLDSS ETHVSEEFSG AQVAFVSSAD AIEAVKSLEK ANPFGETLVN FRLQQKLITV QRNIAPRMPV ISHVSPVPKP NNIPTSMDAM
801: RQNLLMMTAM LEKSGDSLSR ETKAKLKSEI TGLLEKVSSI PSSSSS
Arabidopsis Description
Serine/Threonine-kinase ATM [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.