Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19729 | Canola | nucleus | 90.39 | 90.74 |
| AT5G27650.1 | Thale cress | nucleus | 46.5 | 44.68 |
| AT3G05430.1 | Thale cress | nucleus | 34.66 | 36.99 |
| PGSC0003DMT400063505 | Potato | nucleus | 13.2 | 36.17 |
| KRG96822 | Soybean | nucleus | 32.14 | 30.79 |
| KRH33902 | Soybean | nucleus | 31.16 | 30.72 |
| KRG92886 | Soybean | nucleus | 31.46 | 30.68 |
| Solyc01g099360.2.1 | Tomato | nucleus | 28.93 | 29.59 |
| GSMUA_Achr8P06730_001 | Banana | nucleus | 27.86 | 28.22 |
| GSMUA_Achr3P23960_001 | Banana | nucleus | 26.5 | 26.63 |
| Zm00001d024841_P001 | Maize | nucleus | 21.46 | 26.0 |
| VIT_14s0060g02400.t01 | Wine grape | nucleus | 31.26 | 25.74 |
| Os05t0149200-01 | Rice | plastid | 9.22 | 25.4 |
| Zm00001d010869_P001 | Maize | nucleus | 21.36 | 22.34 |
| Bra028857.1-P | Field mustard | nucleus | 9.81 | 21.96 |
| OQU77406 | Sorghum | nucleus | 21.16 | 21.21 |
| HORVU1Hr1G020500.2 | Barley | nucleus, plastid | 20.49 | 19.38 |
| TraesCS1B01G116700.1 | Wheat | plastid | 20.1 | 19.18 |
| TraesCS1A01G089100.1 | Wheat | plastid | 20.19 | 19.17 |
| TraesCS1D01G097400.1 | Wheat | plastid | 18.84 | 18.62 |
| Bra025306.1-P | Field mustard | nucleus | 8.54 | 16.64 |
| Bra001301.1-P | Field mustard | nucleus | 4.47 | 13.61 |
| Bra028455.1-P | Field mustard | nucleus | 11.36 | 13.16 |
| Bra018079.1-P | Field mustard | nucleus | 6.5 | 7.5 |
Protein Annotations
Description
AT5G27650 (E=0.0) | PWWP domain-containing protein
Coordinates
chrA09:-:2042853..2046191
Molecular Weight (calculated)
112205.0 Da
IEP (calculated)
6.131
GRAVY (calculated)
-0.726
Length
1030 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDEDDAEIPQ QTNPIESPEA NPPPSADADD DVDSTLDAAA SSSSPTELDS SLTNDNGGAR VSEGERSENT DLIAPNEEEE EDDVSETENV IEKSSDDDQS
0101: EADDVAFDEE KRGALEKPAV TDYKSLLSEF DDYVASEKMG SGVSRALSYG FQVGDLVWGK VKSHPWWPGH IFNEAFASPS VRRMRRVDHV LVAFFGDSSY
0201: GWFDPAELIP FEPHLSDKAH QTAAKHFVRA VEEAVDEASR RSALGLTCKC RNPYNFRATS VQDYFTVDVP DYEVQGVYSG EQIMKARDEF SPVEALSFVK
0301: ELALAPQECD DVEESLSFLK KKAVVCAFRN AVFEEFDETY SQAFGTKSMR TSVTSNESSN RTPSRAPLSG PLVIAETLGV PKSSKTPTKV KDSKKQDKYL
0401: LKRRDEAGHK TVPFGQAEAS SSTGVGGSSD GDSVLLRRAS TLQSPMKDEQ TGIVSTDSNS SSAAIPGKES SVPKISFDEE KDVAEESAEK KEERSVVNPE
0501: HEPLKQETGP DSGSAGSSLQ PMIESPRGSH TSASDGKSST GSLIKKLKVA KRSSSEMGTS ENPPSEPVKK KKKMKEPNPN LPRKRKHPLS SGEPGAKKLS
0601: QLGSAHLHTY MDADVPKLLG HLQDLSLDPF SGSTVVSFGA ARKFFLRFRS LNYQKSLSVP SSDANARDTN LSKPGKSVNR TEDPSKAGKK RLSSDRQDEI
0701: PLVKKLKKTN QLKPMASEKK IKLEAKDSVK PAREQSGAVQ ARPSKLQTAK KPAPSAKVVE PTMLVMKFPP GTSLPSPALL KARFGRFGLL DQSAIRVFWK
0801: SSTCRVVFLY KADAQTAFRY ATGNNSLFGN VNVRYFLRDV DAPKAEPQEP ENAKEDDEQP QSQMPDQASP RHQPKLPPPL KSNLKSCLKK LGDDTSSNRP
0901: RVKFMLDGEE NSSKATNEPP NRNDGPSSSS SSSFGMEFVS KKFQNVQLPP STLPPILPLP PQYSKPIKTV DHVEPPMPPP PPPPSRSFPG PSAAVGAGDI
1001: SHQMLNLLSK CNDVVANVTG LLGYVPYHPL
0101: EADDVAFDEE KRGALEKPAV TDYKSLLSEF DDYVASEKMG SGVSRALSYG FQVGDLVWGK VKSHPWWPGH IFNEAFASPS VRRMRRVDHV LVAFFGDSSY
0201: GWFDPAELIP FEPHLSDKAH QTAAKHFVRA VEEAVDEASR RSALGLTCKC RNPYNFRATS VQDYFTVDVP DYEVQGVYSG EQIMKARDEF SPVEALSFVK
0301: ELALAPQECD DVEESLSFLK KKAVVCAFRN AVFEEFDETY SQAFGTKSMR TSVTSNESSN RTPSRAPLSG PLVIAETLGV PKSSKTPTKV KDSKKQDKYL
0401: LKRRDEAGHK TVPFGQAEAS SSTGVGGSSD GDSVLLRRAS TLQSPMKDEQ TGIVSTDSNS SSAAIPGKES SVPKISFDEE KDVAEESAEK KEERSVVNPE
0501: HEPLKQETGP DSGSAGSSLQ PMIESPRGSH TSASDGKSST GSLIKKLKVA KRSSSEMGTS ENPPSEPVKK KKKMKEPNPN LPRKRKHPLS SGEPGAKKLS
0601: QLGSAHLHTY MDADVPKLLG HLQDLSLDPF SGSTVVSFGA ARKFFLRFRS LNYQKSLSVP SSDANARDTN LSKPGKSVNR TEDPSKAGKK RLSSDRQDEI
0701: PLVKKLKKTN QLKPMASEKK IKLEAKDSVK PAREQSGAVQ ARPSKLQTAK KPAPSAKVVE PTMLVMKFPP GTSLPSPALL KARFGRFGLL DQSAIRVFWK
0801: SSTCRVVFLY KADAQTAFRY ATGNNSLFGN VNVRYFLRDV DAPKAEPQEP ENAKEDDEQP QSQMPDQASP RHQPKLPPPL KSNLKSCLKK LGDDTSSNRP
0901: RVKFMLDGEE NSSKATNEPP NRNDGPSSSS SSSFGMEFVS KKFQNVQLPP STLPPILPLP PQYSKPIKTV DHVEPPMPPP PPPPSRSFPG PSAAVGAGDI
1001: SHQMLNLLSK CNDVVANVTG LLGYVPYHPL
0001: MYKTKLIPVM NEDAVIVQQT DSIQDPKVTP DDTVVDSSGD VHEAIDDDVE ASSPMELDSA VTNDARVLES ERSEKDGVVG SEEEDEIKSE DVLIDKDDES
0101: SEVKEEEEEE DGSDDQSSEL GSEADEKELD LGLKEEKKGV SDYKSLLSEF DDYVASEKMG SGVSRALSYG FEVGDLVWGK VKSHPWWPGH IFNEAFASPS
0201: VRRMRRIDHV LVAFFGDSSY GWFDPAELIP FEPNLEEKSQ QTVSKHFVRA VEEAKDEASR RSALGLTCKC RNPYNFRPSN VEDYFAVDVP DYELQAVYSV
0301: DQIKNSRDKF LPAETISFVK QLALAPQECD PDSLKFMKKK AVVFAFRKSV FEEFDETYAQ AFGTKSPRSS VSTLEPHNRA PPRAPLSGPL VIAETLGDLK
0401: SSKKPTKVKV SKKKDKYLLK RRDEAGDKSV QFGEIEASSE ASHIQGIDGS LDGDFGLQRR APTLQTPMKD EKSGIVSMDF ASSNTAIPGK EFSASKPSLD
0501: EEKGLAEKSK ERMEERAAVL PEHGKSEAMA SLKPKEEAGT DLGSAGSSLQ PLLESHTSAS EGKSSTGSVI KKVKVAKRSS SEMSSENPPS EPKKKKKKKK
0601: EPDSDHPVKR KNLYSGEAGA KKLSQLGSAH LQTYMEADVP QLLSHLQDLS LDPFHGLSVA SFGTARKFFL RFRSLNYQKS LSVSSSDATV ENARDTKPSK
0701: PVKTVKRTED PSKAGKKRLS SDRQDEIPSA KKLKKTNQLK SMASEKKIIR EAKDSIKPIR EPSRVVQAKP ARGQTGKKTA PSVKVVEPTM LVMKFPPGTS
0801: LPSAALLKAR FGRFGLLDQS AIRVFWKSST CRVVFLYKAD AQTAFRYATG NNTLFGNVNV KYFLRDVDAP KAEPREPENT KEDDEPQSQW LDQAPPLHQP
0901: TLPPPNVNLK SCLKKPVDDP SSSSNNGNGN RAAVRVKFML GGEENSSKAN TEPPQVTMTL NRNSGPSSSS SSVPMEFVSK KFQNVVHHQQ LPPSTLPPIL
1001: PLPPQYTKPQ QLPIKPVDHV EPPMPPSRNF RGPIPAVSAG DISHQMLNLL SKCNEVVANV TGLLGYVPYH PL
0101: SEVKEEEEEE DGSDDQSSEL GSEADEKELD LGLKEEKKGV SDYKSLLSEF DDYVASEKMG SGVSRALSYG FEVGDLVWGK VKSHPWWPGH IFNEAFASPS
0201: VRRMRRIDHV LVAFFGDSSY GWFDPAELIP FEPNLEEKSQ QTVSKHFVRA VEEAKDEASR RSALGLTCKC RNPYNFRPSN VEDYFAVDVP DYELQAVYSV
0301: DQIKNSRDKF LPAETISFVK QLALAPQECD PDSLKFMKKK AVVFAFRKSV FEEFDETYAQ AFGTKSPRSS VSTLEPHNRA PPRAPLSGPL VIAETLGDLK
0401: SSKKPTKVKV SKKKDKYLLK RRDEAGDKSV QFGEIEASSE ASHIQGIDGS LDGDFGLQRR APTLQTPMKD EKSGIVSMDF ASSNTAIPGK EFSASKPSLD
0501: EEKGLAEKSK ERMEERAAVL PEHGKSEAMA SLKPKEEAGT DLGSAGSSLQ PLLESHTSAS EGKSSTGSVI KKVKVAKRSS SEMSSENPPS EPKKKKKKKK
0601: EPDSDHPVKR KNLYSGEAGA KKLSQLGSAH LQTYMEADVP QLLSHLQDLS LDPFHGLSVA SFGTARKFFL RFRSLNYQKS LSVSSSDATV ENARDTKPSK
0701: PVKTVKRTED PSKAGKKRLS SDRQDEIPSA KKLKKTNQLK SMASEKKIIR EAKDSIKPIR EPSRVVQAKP ARGQTGKKTA PSVKVVEPTM LVMKFPPGTS
0801: LPSAALLKAR FGRFGLLDQS AIRVFWKSST CRVVFLYKAD AQTAFRYATG NNTLFGNVNV KYFLRDVDAP KAEPREPENT KEDDEPQSQW LDQAPPLHQP
0901: TLPPPNVNLK SCLKKPVDDP SSSSNNGNGN RAAVRVKFML GGEENSSKAN TEPPQVTMTL NRNSGPSSSS SSVPMEFVSK KFQNVVHHQQ LPPSTLPPIL
1001: PLPPQYTKPQ QLPIKPVDHV EPPMPPSRNF RGPIPAVSAG DISHQMLNLL SKCNEVVANV TGLLGYVPYH PL
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K4D6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.