Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024841_P001 | Maize | nucleus | 59.39 | 68.82 |
| OQU77406 | Sorghum | nucleus | 56.75 | 54.38 |
| TraesCS1B01G116700.1 | Wheat | plastid | 47.01 | 42.91 |
| TraesCS1A01G089100.1 | Wheat | plastid | 46.8 | 42.49 |
| TraesCS1D01G097400.1 | Wheat | plastid | 43.45 | 41.07 |
| HORVU1Hr1G020500.2 | Barley | nucleus, plastid | 44.26 | 40.04 |
| Os05t0149200-01 | Rice | plastid | 14.92 | 39.3 |
| GSMUA_Achr8P06730_001 | Banana | nucleus | 26.19 | 25.37 |
| GSMUA_Achr3P23960_001 | Banana | nucleus | 25.89 | 24.88 |
| PGSC0003DMT400063505 | Potato | nucleus | 9.44 | 24.73 |
| KRH33902 | Soybean | nucleus | 24.37 | 22.97 |
| CDX99976 | Canola | nucleus | 21.62 | 22.76 |
| Solyc01g099360.2.1 | Tomato | nucleus | 22.94 | 22.44 |
| KRG92886 | Soybean | nucleus | 23.86 | 22.25 |
| KRG96822 | Soybean | nucleus | 24.26 | 22.23 |
| AT5G27650.1 | Thale cress | nucleus | 23.45 | 21.55 |
| Bra036620.1-P | Field mustard | nucleus | 22.34 | 21.36 |
| CDY19729 | Canola | nucleus | 21.83 | 20.96 |
| AT3G05430.1 | Thale cress | nucleus | 20.0 | 20.41 |
| VIT_14s0060g02400.t01 | Wine grape | nucleus | 25.89 | 20.38 |
| Zm00001d010984_P001 | Maize | plastid | 8.63 | 16.63 |
| Zm00001d011770_P001 | Maize | nucleus | 10.96 | 12.15 |
| Zm00001d041940_P001 | Maize | nucleus | 10.05 | 11.69 |
| Zm00001d038396_P003 | Maize | nucleus | 11.07 | 8.07 |
| Zm00001d010556_P002 | Maize | nucleus | 11.78 | 6.25 |
Protein Annotations
| EnsemblPlants:Zm00001d010869_P001 | EnsemblPlants:Zm00001d010869_T001 | EnsemblPlantsGene:Zm00001d010869 | Gene3D:2.30.30.140 | InterPro:IPR000313 | InterPro:PWWP_dom |
| PANTHER:PTHR10688 | PANTHER:PTHR10688:SF1 | PFAM:PF00855 | PFscan:PS50812 | ProteinID:AQK95148.1 | SEG:seg |
| SMART:SM00293 | SUPFAM:SSF63748 | UniParc:UPI0004DE98AD | UniProt:A0A1D6FUK3 | MapMan:35.2 | : |
Description
Tudor/PWWP/MBT superfamily protein
Coordinates
chr8:-:131438563..131445218
Molecular Weight (calculated)
104709.0 Da
IEP (calculated)
10.293
GRAVY (calculated)
-0.583
Length
985 amino acids
Sequence
(BLAST)
(BLAST)
001: MADPAAGGAM VPAAGGGSVW ANGAPRFGDM VWAKVKSHPW WPGHIYSVSL TDDEEVHRGY RYGLVLVAFF GDKSYGWFEP SELVPFEEHF TEKAAQGGST
101: RSSFAGAVAE AVDEVARRSA LALLCPCKSP DAFRPHPSDG NFLLVDVPAF DTDADYHPDQ IQAARQRFVP RKALDYLLDA AVTQRDAAEK AARTVPGMEM
201: AALFSAYRRA VFSPIDNTYA QAFGVDPELA LAAEQKAAAE RAQRARPLKG GPRKTADQAT PAAGRRRGGA GGAAARLMEK IVPGAPAMKT KSSKKDQYLL
301: KRRDAPEASA HSQPQLPDAP PPAPTLAAED GPPGFPASGD PPTPPLPGSS VADEDFMLQR RVPLVDVPPA VQAQPSEGPA APKNATKLKK PRKREREEGP
401: DATPDSADAA GDPKKKKKKK KLSDVDGAGG KVAFVVEGRD VLDLTQVLSD IRNLPLAPFH GAERLISDAA RSFVLAFRSK YYKKSYENDP PEELKSLDKP
501: SAAATDGQSP KKKKPAPRPG AGNDPTKAGV KRGPSDRQGE LAIKKKAKLD KIKVLSSEKK AAGLEQKDTA AAAAQQQARA AGAKDKAEMG AAKKKEPASA
601: RTVRTPSPTA LMMKFPLNST LPSVASLKAR FARFGPLDVD GIRVYWKSHM CRVVYRFKFD AEAALRYAKA NAMFGQVDTQ YHLREVEAGA GREPLAAPEA
701: APQQRSELRL METAAFRPGT SGNGAPLPMS RAGAAPARPA VGVGQPPKSI LKKSTDEGSS GTTREVSRVK FVLDGADGGT LAPPPSVGGN GNGADGGSSM
801: VAKAAKSVGF APSQALQPPP RTLQPPMRPA HQQPPRAAVT QQLPPPPLPQ HLPYHQHPRG ADGTPLAPPP GQLLAYPPRG HGEGPSALPG LPPPLPYQPR
901: PTGFPGGQQL GYPPRSGDNL PLLAGQPQFP PRPSNAKAGS EGPAWRRGEK EFKEEVWRLM TGIAKMVEPL TDKNGFFPYH LFRAQ
101: RSSFAGAVAE AVDEVARRSA LALLCPCKSP DAFRPHPSDG NFLLVDVPAF DTDADYHPDQ IQAARQRFVP RKALDYLLDA AVTQRDAAEK AARTVPGMEM
201: AALFSAYRRA VFSPIDNTYA QAFGVDPELA LAAEQKAAAE RAQRARPLKG GPRKTADQAT PAAGRRRGGA GGAAARLMEK IVPGAPAMKT KSSKKDQYLL
301: KRRDAPEASA HSQPQLPDAP PPAPTLAAED GPPGFPASGD PPTPPLPGSS VADEDFMLQR RVPLVDVPPA VQAQPSEGPA APKNATKLKK PRKREREEGP
401: DATPDSADAA GDPKKKKKKK KLSDVDGAGG KVAFVVEGRD VLDLTQVLSD IRNLPLAPFH GAERLISDAA RSFVLAFRSK YYKKSYENDP PEELKSLDKP
501: SAAATDGQSP KKKKPAPRPG AGNDPTKAGV KRGPSDRQGE LAIKKKAKLD KIKVLSSEKK AAGLEQKDTA AAAAQQQARA AGAKDKAEMG AAKKKEPASA
601: RTVRTPSPTA LMMKFPLNST LPSVASLKAR FARFGPLDVD GIRVYWKSHM CRVVYRFKFD AEAALRYAKA NAMFGQVDTQ YHLREVEAGA GREPLAAPEA
701: APQQRSELRL METAAFRPGT SGNGAPLPMS RAGAAPARPA VGVGQPPKSI LKKSTDEGSS GTTREVSRVK FVLDGADGGT LAPPPSVGGN GNGADGGSSM
801: VAKAAKSVGF APSQALQPPP RTLQPPMRPA HQQPPRAAVT QQLPPPPLPQ HLPYHQHPRG ADGTPLAPPP GQLLAYPPRG HGEGPSALPG LPPPLPYQPR
901: PTGFPGGQQL GYPPRSGDNL PLLAGQPQFP PRPSNAKAGS EGPAWRRGEK EFKEEVWRLM TGIAKMVEPL TDKNGFFPYH LFRAQ
0001: MYKTKLIPVM NEDAVIVQQT DSIQDPKVTP DDTVVDSSGD VHEAIDDDVE ASSPMELDSA VTNDARVLES ERSEKDGVVG SEEEDEIKSE DVLIDKDDES
0101: SEVKEEEEEE DGSDDQSSEL GSEADEKELD LGLKEEKKGV SDYKSLLSEF DDYVASEKMG SGVSRALSYG FEVGDLVWGK VKSHPWWPGH IFNEAFASPS
0201: VRRMRRIDHV LVAFFGDSSY GWFDPAELIP FEPNLEEKSQ QTVSKHFVRA VEEAKDEASR RSALGLTCKC RNPYNFRPSN VEDYFAVDVP DYELQAVYSV
0301: DQIKNSRDKF LPAETISFVK QLALAPQECD PDSLKFMKKK AVVFAFRKSV FEEFDETYAQ AFGTKSPRSS VSTLEPHNRA PPRAPLSGPL VIAETLGDLK
0401: SSKKPTKVKV SKKKDKYLLK RRDEAGDKSV QFGEIEASSE ASHIQGIDGS LDGDFGLQRR APTLQTPMKD EKSGIVSMDF ASSNTAIPGK EFSASKPSLD
0501: EEKGLAEKSK ERMEERAAVL PEHGKSEAMA SLKPKEEAGT DLGSAGSSLQ PLLESHTSAS EGKSSTGSVI KKVKVAKRSS SEMSSENPPS EPKKKKKKKK
0601: EPDSDHPVKR KNLYSGEAGA KKLSQLGSAH LQTYMEADVP QLLSHLQDLS LDPFHGLSVA SFGTARKFFL RFRSLNYQKS LSVSSSDATV ENARDTKPSK
0701: PVKTVKRTED PSKAGKKRLS SDRQDEIPSA KKLKKTNQLK SMASEKKIIR EAKDSIKPIR EPSRVVQAKP ARGQTGKKTA PSVKVVEPTM LVMKFPPGTS
0801: LPSAALLKAR FGRFGLLDQS AIRVFWKSST CRVVFLYKAD AQTAFRYATG NNTLFGNVNV KYFLRDVDAP KAEPREPENT KEDDEPQSQW LDQAPPLHQP
0901: TLPPPNVNLK SCLKKPVDDP SSSSNNGNGN RAAVRVKFML GGEENSSKAN TEPPQVTMTL NRNSGPSSSS SSVPMEFVSK KFQNVVHHQQ LPPSTLPPIL
1001: PLPPQYTKPQ QLPIKPVDHV EPPMPPSRNF RGPIPAVSAG DISHQMLNLL SKCNEVVANV TGLLGYVPYH PL
0101: SEVKEEEEEE DGSDDQSSEL GSEADEKELD LGLKEEKKGV SDYKSLLSEF DDYVASEKMG SGVSRALSYG FEVGDLVWGK VKSHPWWPGH IFNEAFASPS
0201: VRRMRRIDHV LVAFFGDSSY GWFDPAELIP FEPNLEEKSQ QTVSKHFVRA VEEAKDEASR RSALGLTCKC RNPYNFRPSN VEDYFAVDVP DYELQAVYSV
0301: DQIKNSRDKF LPAETISFVK QLALAPQECD PDSLKFMKKK AVVFAFRKSV FEEFDETYAQ AFGTKSPRSS VSTLEPHNRA PPRAPLSGPL VIAETLGDLK
0401: SSKKPTKVKV SKKKDKYLLK RRDEAGDKSV QFGEIEASSE ASHIQGIDGS LDGDFGLQRR APTLQTPMKD EKSGIVSMDF ASSNTAIPGK EFSASKPSLD
0501: EEKGLAEKSK ERMEERAAVL PEHGKSEAMA SLKPKEEAGT DLGSAGSSLQ PLLESHTSAS EGKSSTGSVI KKVKVAKRSS SEMSSENPPS EPKKKKKKKK
0601: EPDSDHPVKR KNLYSGEAGA KKLSQLGSAH LQTYMEADVP QLLSHLQDLS LDPFHGLSVA SFGTARKFFL RFRSLNYQKS LSVSSSDATV ENARDTKPSK
0701: PVKTVKRTED PSKAGKKRLS SDRQDEIPSA KKLKKTNQLK SMASEKKIIR EAKDSIKPIR EPSRVVQAKP ARGQTGKKTA PSVKVVEPTM LVMKFPPGTS
0801: LPSAALLKAR FGRFGLLDQS AIRVFWKSST CRVVFLYKAD AQTAFRYATG NNTLFGNVNV KYFLRDVDAP KAEPREPENT KEDDEPQSQW LDQAPPLHQP
0901: TLPPPNVNLK SCLKKPVDDP SSSSNNGNGN RAAVRVKFML GGEENSSKAN TEPPQVTMTL NRNSGPSSSS SSVPMEFVSK KFQNVVHHQQ LPPSTLPPIL
1001: PLPPQYTKPQ QLPIKPVDHV EPPMPPSRNF RGPIPAVSAG DISHQMLNLL SKCNEVVANV TGLLGYVPYH PL
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K4D6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.