Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024841_P001 | Maize | nucleus | 54.47 | 65.88 |
| Zm00001d010869_P001 | Maize | nucleus | 54.38 | 56.75 |
| TraesCS1B01G116700.1 | Wheat | plastid | 46.11 | 43.93 |
| TraesCS1A01G089100.1 | Wheat | plastid | 46.01 | 43.59 |
| HORVU1Hr1G020500.2 | Barley | nucleus, plastid | 44.55 | 42.06 |
| TraesCS1D01G097400.1 | Wheat | plastid | 42.22 | 41.65 |
| Os05t0149200-01 | Rice | plastid | 13.62 | 37.43 |
| GSMUA_Achr3P23960_001 | Banana | nucleus | 27.04 | 27.12 |
| GSMUA_Achr8P06730_001 | Banana | nucleus | 26.75 | 27.04 |
| PGSC0003DMT400063505 | Potato | nucleus | 9.53 | 26.06 |
| KRH33902 | Soybean | nucleus | 23.83 | 23.45 |
| KRG96822 | Soybean | nucleus | 24.12 | 23.07 |
| AT5G27650.1 | Thale cress | nucleus | 23.83 | 22.85 |
| KRG92886 | Soybean | nucleus | 23.44 | 22.82 |
| Solyc01g099360.2.1 | Tomato | nucleus | 22.18 | 22.64 |
| CDX99976 | Canola | nucleus | 19.94 | 21.9 |
| Bra036620.1-P | Field mustard | nucleus | 21.21 | 21.16 |
| AT3G05430.1 | Thale cress | nucleus | 19.65 | 20.93 |
| VIT_14s0060g02400.t01 | Wine grape | nucleus | 25.39 | 20.86 |
| CDY19729 | Canola | nucleus | 20.72 | 20.76 |
| EES18937 | Sorghum | nucleus, plastid | 8.17 | 16.6 |
| KXG34235 | Sorghum | nucleus | 8.56 | 9.85 |
| OQU78150 | Sorghum | nucleus | 10.7 | 7.94 |
Protein Annotations
| EnsemblPlants:OQU77406 | EnsemblPlantsGene:SORBI_3009G044300 | Gene3D:2.30.30.140 | InterPro:IPR000313 | InterPro:PWWP_dom | ncoils:Coil |
| PANTHER:PTHR10688 | PANTHER:PTHR10688:SF1 | PFAM:PF00855 | PFscan:PS50812 | ProteinID:OQU77406 | ProteinID:OQU77406.1 |
| SEG:seg | SMART:SM00293 | SUPFAM:SSF63748 | UniParc:UPI000B425E05 | UniProt:A0A1Z5R220 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr9:+:4235541..4243329
Molecular Weight (calculated)
109852.0 Da
IEP (calculated)
10.339
GRAVY (calculated)
-0.696
Length
1028 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSDPAAGGTM VHAAGGGGAW ANGGPRFGDM VWAKVKSHPW WPGHIYSVNL TDDEEVHRGY RDGLVLVAFF GDSSYGWFEP SELVPFEDHF TEKAAQGGSS
0101: RSSFAAAVAE AVDEVARRSA LALLCPCNNP DAFRPHPIDG NFFLVDVPAF DTDADYHRDQ IRAARQRFVP RKALDYLLDA AVTQHDAAEK AARTVPGMEM
0201: AGLFSAYRRA VFSPVDNTYA QAFGVDPELA RAAEQRAAAE RAQRARPLKG GLRKTAAEHA TPAAGRRGRG GAGGAAARLM EKIVPGASAM KAKSSKKDQY
0301: LLKRRDAPEA ASSAHHHRQP QLPDAPPPAP PAPALDDGPP GFPASDDPPT PPLPGSSIAD EDFMMLQRRA PLVEVPPPAA HQSHPPEGPA APKKATKPKK
0401: PRKREREEGA DADADASPDA VDADGEPKKR KKKKKLPNLD GAGARKAAAV VQDPNGLDLT QVLSDIRNLP LAPFHGADRR ISDTARSFVL AFRSKYYKKS
0501: YENDPPEEST KMGLDKPTAT AAAAADGQSP KKKKKPAAPR PPGVGNDPTK AGVKRGPSDR QGELAVKKKA KLDKIKTLSS EKKAAGLGLE QKDTTAVAAA
0601: AAQQQQQAAR AAAGGGKDNK GEMGGAAAKK KEPAPAPRVR TPSPTALMMK FPLKSTLPSV ASLKARFARF GPLDVDGIRV YWKSHMCRVI YRFKADAEAA
0701: LRYAKANAMF GQVDTQYHLR EVESGAAVAA PEAPPQQQQQ QRSELRLMET ASFRPGSSGN GAPLPMSRAG AVPARPAVGQ QPKSILKKST DEGNSGTTRE
0801: VSRVKFMLDG ADGGKLEPTA PPASGVGGNG ADKAAKSVGF GSSQPLQPPQ RALQPPMRPT LQQQPPRAAA VVTQQLPPPP HLQQQQHLPY HQPRVADGPP
0901: LVPPQGQMLA YPPPRGHGEG PSTLPGPPPP LPYQPRPTGF PGGQQRQRQQ VGYYPPRSGD STALLAGQQQ QFPPRPSNGN GGEEVPAWKR SEKEFKEEVW
1001: RLMTGIAKMV EPLTDKNGFF PYHLFRAQ
0101: RSSFAAAVAE AVDEVARRSA LALLCPCNNP DAFRPHPIDG NFFLVDVPAF DTDADYHRDQ IRAARQRFVP RKALDYLLDA AVTQHDAAEK AARTVPGMEM
0201: AGLFSAYRRA VFSPVDNTYA QAFGVDPELA RAAEQRAAAE RAQRARPLKG GLRKTAAEHA TPAAGRRGRG GAGGAAARLM EKIVPGASAM KAKSSKKDQY
0301: LLKRRDAPEA ASSAHHHRQP QLPDAPPPAP PAPALDDGPP GFPASDDPPT PPLPGSSIAD EDFMMLQRRA PLVEVPPPAA HQSHPPEGPA APKKATKPKK
0401: PRKREREEGA DADADASPDA VDADGEPKKR KKKKKLPNLD GAGARKAAAV VQDPNGLDLT QVLSDIRNLP LAPFHGADRR ISDTARSFVL AFRSKYYKKS
0501: YENDPPEEST KMGLDKPTAT AAAAADGQSP KKKKKPAAPR PPGVGNDPTK AGVKRGPSDR QGELAVKKKA KLDKIKTLSS EKKAAGLGLE QKDTTAVAAA
0601: AAQQQQQAAR AAAGGGKDNK GEMGGAAAKK KEPAPAPRVR TPSPTALMMK FPLKSTLPSV ASLKARFARF GPLDVDGIRV YWKSHMCRVI YRFKADAEAA
0701: LRYAKANAMF GQVDTQYHLR EVESGAAVAA PEAPPQQQQQ QRSELRLMET ASFRPGSSGN GAPLPMSRAG AVPARPAVGQ QPKSILKKST DEGNSGTTRE
0801: VSRVKFMLDG ADGGKLEPTA PPASGVGGNG ADKAAKSVGF GSSQPLQPPQ RALQPPMRPT LQQQPPRAAA VVTQQLPPPP HLQQQQHLPY HQPRVADGPP
0901: LVPPQGQMLA YPPPRGHGEG PSTLPGPPPP LPYQPRPTGF PGGQQRQRQQ VGYYPPRSGD STALLAGQQQ QFPPRPSNGN GGEEVPAWKR SEKEFKEEVW
1001: RLMTGIAKMV EPLTDKNGFF PYHLFRAQ
0001: MYKTKLIPVM NEDAVIVQQT DSIQDPKVTP DDTVVDSSGD VHEAIDDDVE ASSPMELDSA VTNDARVLES ERSEKDGVVG SEEEDEIKSE DVLIDKDDES
0101: SEVKEEEEEE DGSDDQSSEL GSEADEKELD LGLKEEKKGV SDYKSLLSEF DDYVASEKMG SGVSRALSYG FEVGDLVWGK VKSHPWWPGH IFNEAFASPS
0201: VRRMRRIDHV LVAFFGDSSY GWFDPAELIP FEPNLEEKSQ QTVSKHFVRA VEEAKDEASR RSALGLTCKC RNPYNFRPSN VEDYFAVDVP DYELQAVYSV
0301: DQIKNSRDKF LPAETISFVK QLALAPQECD PDSLKFMKKK AVVFAFRKSV FEEFDETYAQ AFGTKSPRSS VSTLEPHNRA PPRAPLSGPL VIAETLGDLK
0401: SSKKPTKVKV SKKKDKYLLK RRDEAGDKSV QFGEIEASSE ASHIQGIDGS LDGDFGLQRR APTLQTPMKD EKSGIVSMDF ASSNTAIPGK EFSASKPSLD
0501: EEKGLAEKSK ERMEERAAVL PEHGKSEAMA SLKPKEEAGT DLGSAGSSLQ PLLESHTSAS EGKSSTGSVI KKVKVAKRSS SEMSSENPPS EPKKKKKKKK
0601: EPDSDHPVKR KNLYSGEAGA KKLSQLGSAH LQTYMEADVP QLLSHLQDLS LDPFHGLSVA SFGTARKFFL RFRSLNYQKS LSVSSSDATV ENARDTKPSK
0701: PVKTVKRTED PSKAGKKRLS SDRQDEIPSA KKLKKTNQLK SMASEKKIIR EAKDSIKPIR EPSRVVQAKP ARGQTGKKTA PSVKVVEPTM LVMKFPPGTS
0801: LPSAALLKAR FGRFGLLDQS AIRVFWKSST CRVVFLYKAD AQTAFRYATG NNTLFGNVNV KYFLRDVDAP KAEPREPENT KEDDEPQSQW LDQAPPLHQP
0901: TLPPPNVNLK SCLKKPVDDP SSSSNNGNGN RAAVRVKFML GGEENSSKAN TEPPQVTMTL NRNSGPSSSS SSVPMEFVSK KFQNVVHHQQ LPPSTLPPIL
1001: PLPPQYTKPQ QLPIKPVDHV EPPMPPSRNF RGPIPAVSAG DISHQMLNLL SKCNEVVANV TGLLGYVPYH PL
0101: SEVKEEEEEE DGSDDQSSEL GSEADEKELD LGLKEEKKGV SDYKSLLSEF DDYVASEKMG SGVSRALSYG FEVGDLVWGK VKSHPWWPGH IFNEAFASPS
0201: VRRMRRIDHV LVAFFGDSSY GWFDPAELIP FEPNLEEKSQ QTVSKHFVRA VEEAKDEASR RSALGLTCKC RNPYNFRPSN VEDYFAVDVP DYELQAVYSV
0301: DQIKNSRDKF LPAETISFVK QLALAPQECD PDSLKFMKKK AVVFAFRKSV FEEFDETYAQ AFGTKSPRSS VSTLEPHNRA PPRAPLSGPL VIAETLGDLK
0401: SSKKPTKVKV SKKKDKYLLK RRDEAGDKSV QFGEIEASSE ASHIQGIDGS LDGDFGLQRR APTLQTPMKD EKSGIVSMDF ASSNTAIPGK EFSASKPSLD
0501: EEKGLAEKSK ERMEERAAVL PEHGKSEAMA SLKPKEEAGT DLGSAGSSLQ PLLESHTSAS EGKSSTGSVI KKVKVAKRSS SEMSSENPPS EPKKKKKKKK
0601: EPDSDHPVKR KNLYSGEAGA KKLSQLGSAH LQTYMEADVP QLLSHLQDLS LDPFHGLSVA SFGTARKFFL RFRSLNYQKS LSVSSSDATV ENARDTKPSK
0701: PVKTVKRTED PSKAGKKRLS SDRQDEIPSA KKLKKTNQLK SMASEKKIIR EAKDSIKPIR EPSRVVQAKP ARGQTGKKTA PSVKVVEPTM LVMKFPPGTS
0801: LPSAALLKAR FGRFGLLDQS AIRVFWKSST CRVVFLYKAD AQTAFRYATG NNTLFGNVNV KYFLRDVDAP KAEPREPENT KEDDEPQSQW LDQAPPLHQP
0901: TLPPPNVNLK SCLKKPVDDP SSSSNNGNGN RAAVRVKFML GGEENSSKAN TEPPQVTMTL NRNSGPSSSS SSVPMEFVSK KFQNVVHHQQ LPPSTLPPIL
1001: PLPPQYTKPQ QLPIKPVDHV EPPMPPSRNF RGPIPAVSAG DISHQMLNLL SKCNEVVANV TGLLGYVPYH PL
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K4D6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.