Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G089100.1 | Wheat | plastid | 84.99 | 84.52 |
| TraesCS1D01G097400.1 | Wheat | plastid | 79.98 | 82.82 |
| HORVU1Hr1G020500.2 | Barley | nucleus, plastid | 83.32 | 82.55 |
| Zm00001d024841_P001 | Maize | nucleus | 42.17 | 53.53 |
| Zm00001d010869_P001 | Maize | nucleus | 42.91 | 47.01 |
| OQU77406 | Sorghum | nucleus | 43.93 | 46.11 |
| Os05t0149200-01 | Rice | plastid | 12.7 | 36.63 |
| GSMUA_Achr8P06730_001 | Banana | nucleus | 25.3 | 26.84 |
| GSMUA_Achr3P23960_001 | Banana | nucleus | 24.75 | 26.05 |
| PGSC0003DMT400063505 | Potato | nucleus | 8.62 | 24.73 |
| KRH33902 | Soybean | nucleus | 22.61 | 23.35 |
| KRG92886 | Soybean | nucleus | 22.52 | 23.01 |
| KRG96822 | Soybean | nucleus | 22.15 | 22.23 |
| Solyc01g099360.2.1 | Tomato | nucleus | 20.48 | 21.95 |
| CDX99976 | Canola | nucleus | 18.91 | 21.79 |
| AT5G27650.1 | Thale cress | nucleus | 21.32 | 21.46 |
| AT3G05430.1 | Thale cress | nucleus | 18.16 | 20.31 |
| Bra036620.1-P | Field mustard | nucleus | 19.18 | 20.1 |
| CDY19729 | Canola | nucleus | 18.91 | 19.88 |
| VIT_14s0060g02400.t01 | Wine grape | nucleus | 22.8 | 19.66 |
| TraesCS1B01G077900.1 | Wheat | nucleus | 7.97 | 15.44 |
| TraesCS1B01G077800.1 | Wheat | cytosol | 7.32 | 14.34 |
| TraesCS1B01G297600.1 | Wheat | nucleus | 9.73 | 14.17 |
| TraesCS1B01G297800.1 | Wheat | nucleus | 10.47 | 9.45 |
| TraesCS3B01G603700.1 | Wheat | nucleus | 1.48 | 8.29 |
| TraesCS3B01G603600.1 | Wheat | nucleus | 9.82 | 6.99 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G116700.1 | EnsemblPlantsGene:TraesCS1B01G116700 | Gene3D:2.30.30.140 | InterPro:IPR000313 | InterPro:PWWP_dom | PANTHER:PTHR10688 |
| PANTHER:PTHR10688:SF1 | PFAM:PF00855 | PFscan:PS50812 | SEG:seg | SMART:SM00293 | SUPFAM:SSF63748 |
| TIGR:cd05162 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:137123191..137130943
Molecular Weight (calculated)
116898.0 Da
IEP (calculated)
10.395
GRAVY (calculated)
-0.706
Length
1079 amino acids
Sequence
(BLAST)
(BLAST)
0001: MMPLGRCPSP TRPEIPQFPQ PPKPKQRNPK PKPKPRPRDP APKSRVSLPR RRMAAPAAAG SGAVVPAGDG EGWTPSFGDM VWGKVKSHPW WPGHVYSLTL
0101: SDDPEVHRGH RHGLVLVAFF GDGSYGWFEP HELVRFEDHF VEKTSQGGSR TFPAAVAESL DEISRRSALA LLCPCRGPDT FRPHNEDRRF LLVNVPGFDS
0201: NAEYLHEQVT AARERFVPQK MFDFLQNAAV QQRDAAETAA RTLPGIEMAA MLMAYRRSRY ERYDLTYAES FGVDSKKALE GEVKAENERS QRARPLKGRQ
0301: KVPEKENAPA RGRRGAAGAA ARLMEKIMPG APAMKPKASK KDQYLLKRRE DARAPALPPA ALPDAAPAPD DGGPPGFPPA EPQTPPLPSS TGGGDEEEFM
0401: LQRRALPPAD QASDGGATAD DAAAATAPKK VAKPKKARKR EREEPAEDVA AADGEPKKKK KKKKLAELNG GLPSAAPSVD GGGATKPAAF SPPKVDLDGL
0501: DLTQVISDLQ NLPLLPFYGA GRRISDASHS FILAFRSKHY KKSYENDPPE ESKKGMDNKP TVVAAAAAAV SDGQPPKPLK KKPVMRPSDP TSAGVKRPPS
0601: DRQEEIASKK KIKLDKIKTL AADKKAGLEQ KVPAATAAAG GGTTAAAQLP RAGMKEKALA AAKKKVPAAA PVKRTPSPTA LMMKFPLKST LPSVASLKAR
0701: FARFGPLDIN GIRVYWKSNM CRVIYKFQSD AEAALKYAKA NAMFGQLAPN YYLRGVEGGS AGADPGPEPA PPQRSELRLM ETTPFRPGSS GNGAPLTLSK
0801: AVPARMSVGL PKSILKKSND EGGLAAASAL RDSPRVKFVL DGGDSMLEPP PLPASFDGNN GPDTAAPVSK VARSLGFAQP PLQPPARPAQ PNLQPLMRPQ
0901: HQQLQPPRAP DSQPLPPPPP LPYQPRINEP SSYQPRISEP SPYQSRVNEP QLYQPRRTDA PPMFNMQPPY QPRQSDALPS FNMQPPYQPR HSDGPLALPG
1001: QPPLPPYPPR AGFPGQQYSS RSDDMPPAHF DNNAMPVWKR GEKEFNEELM RVMLGIAKLV EPLMDKNGNF PYHLFSRSA
0101: SDDPEVHRGH RHGLVLVAFF GDGSYGWFEP HELVRFEDHF VEKTSQGGSR TFPAAVAESL DEISRRSALA LLCPCRGPDT FRPHNEDRRF LLVNVPGFDS
0201: NAEYLHEQVT AARERFVPQK MFDFLQNAAV QQRDAAETAA RTLPGIEMAA MLMAYRRSRY ERYDLTYAES FGVDSKKALE GEVKAENERS QRARPLKGRQ
0301: KVPEKENAPA RGRRGAAGAA ARLMEKIMPG APAMKPKASK KDQYLLKRRE DARAPALPPA ALPDAAPAPD DGGPPGFPPA EPQTPPLPSS TGGGDEEEFM
0401: LQRRALPPAD QASDGGATAD DAAAATAPKK VAKPKKARKR EREEPAEDVA AADGEPKKKK KKKKLAELNG GLPSAAPSVD GGGATKPAAF SPPKVDLDGL
0501: DLTQVISDLQ NLPLLPFYGA GRRISDASHS FILAFRSKHY KKSYENDPPE ESKKGMDNKP TVVAAAAAAV SDGQPPKPLK KKPVMRPSDP TSAGVKRPPS
0601: DRQEEIASKK KIKLDKIKTL AADKKAGLEQ KVPAATAAAG GGTTAAAQLP RAGMKEKALA AAKKKVPAAA PVKRTPSPTA LMMKFPLKST LPSVASLKAR
0701: FARFGPLDIN GIRVYWKSNM CRVIYKFQSD AEAALKYAKA NAMFGQLAPN YYLRGVEGGS AGADPGPEPA PPQRSELRLM ETTPFRPGSS GNGAPLTLSK
0801: AVPARMSVGL PKSILKKSND EGGLAAASAL RDSPRVKFVL DGGDSMLEPP PLPASFDGNN GPDTAAPVSK VARSLGFAQP PLQPPARPAQ PNLQPLMRPQ
0901: HQQLQPPRAP DSQPLPPPPP LPYQPRINEP SSYQPRISEP SPYQSRVNEP QLYQPRRTDA PPMFNMQPPY QPRQSDALPS FNMQPPYQPR HSDGPLALPG
1001: QPPLPPYPPR AGFPGQQYSS RSDDMPPAHF DNNAMPVWKR GEKEFNEELM RVMLGIAKLV EPLMDKNGNF PYHLFSRSA
0001: MYKTKLIPVM NEDAVIVQQT DSIQDPKVTP DDTVVDSSGD VHEAIDDDVE ASSPMELDSA VTNDARVLES ERSEKDGVVG SEEEDEIKSE DVLIDKDDES
0101: SEVKEEEEEE DGSDDQSSEL GSEADEKELD LGLKEEKKGV SDYKSLLSEF DDYVASEKMG SGVSRALSYG FEVGDLVWGK VKSHPWWPGH IFNEAFASPS
0201: VRRMRRIDHV LVAFFGDSSY GWFDPAELIP FEPNLEEKSQ QTVSKHFVRA VEEAKDEASR RSALGLTCKC RNPYNFRPSN VEDYFAVDVP DYELQAVYSV
0301: DQIKNSRDKF LPAETISFVK QLALAPQECD PDSLKFMKKK AVVFAFRKSV FEEFDETYAQ AFGTKSPRSS VSTLEPHNRA PPRAPLSGPL VIAETLGDLK
0401: SSKKPTKVKV SKKKDKYLLK RRDEAGDKSV QFGEIEASSE ASHIQGIDGS LDGDFGLQRR APTLQTPMKD EKSGIVSMDF ASSNTAIPGK EFSASKPSLD
0501: EEKGLAEKSK ERMEERAAVL PEHGKSEAMA SLKPKEEAGT DLGSAGSSLQ PLLESHTSAS EGKSSTGSVI KKVKVAKRSS SEMSSENPPS EPKKKKKKKK
0601: EPDSDHPVKR KNLYSGEAGA KKLSQLGSAH LQTYMEADVP QLLSHLQDLS LDPFHGLSVA SFGTARKFFL RFRSLNYQKS LSVSSSDATV ENARDTKPSK
0701: PVKTVKRTED PSKAGKKRLS SDRQDEIPSA KKLKKTNQLK SMASEKKIIR EAKDSIKPIR EPSRVVQAKP ARGQTGKKTA PSVKVVEPTM LVMKFPPGTS
0801: LPSAALLKAR FGRFGLLDQS AIRVFWKSST CRVVFLYKAD AQTAFRYATG NNTLFGNVNV KYFLRDVDAP KAEPREPENT KEDDEPQSQW LDQAPPLHQP
0901: TLPPPNVNLK SCLKKPVDDP SSSSNNGNGN RAAVRVKFML GGEENSSKAN TEPPQVTMTL NRNSGPSSSS SSVPMEFVSK KFQNVVHHQQ LPPSTLPPIL
1001: PLPPQYTKPQ QLPIKPVDHV EPPMPPSRNF RGPIPAVSAG DISHQMLNLL SKCNEVVANV TGLLGYVPYH PL
0101: SEVKEEEEEE DGSDDQSSEL GSEADEKELD LGLKEEKKGV SDYKSLLSEF DDYVASEKMG SGVSRALSYG FEVGDLVWGK VKSHPWWPGH IFNEAFASPS
0201: VRRMRRIDHV LVAFFGDSSY GWFDPAELIP FEPNLEEKSQ QTVSKHFVRA VEEAKDEASR RSALGLTCKC RNPYNFRPSN VEDYFAVDVP DYELQAVYSV
0301: DQIKNSRDKF LPAETISFVK QLALAPQECD PDSLKFMKKK AVVFAFRKSV FEEFDETYAQ AFGTKSPRSS VSTLEPHNRA PPRAPLSGPL VIAETLGDLK
0401: SSKKPTKVKV SKKKDKYLLK RRDEAGDKSV QFGEIEASSE ASHIQGIDGS LDGDFGLQRR APTLQTPMKD EKSGIVSMDF ASSNTAIPGK EFSASKPSLD
0501: EEKGLAEKSK ERMEERAAVL PEHGKSEAMA SLKPKEEAGT DLGSAGSSLQ PLLESHTSAS EGKSSTGSVI KKVKVAKRSS SEMSSENPPS EPKKKKKKKK
0601: EPDSDHPVKR KNLYSGEAGA KKLSQLGSAH LQTYMEADVP QLLSHLQDLS LDPFHGLSVA SFGTARKFFL RFRSLNYQKS LSVSSSDATV ENARDTKPSK
0701: PVKTVKRTED PSKAGKKRLS SDRQDEIPSA KKLKKTNQLK SMASEKKIIR EAKDSIKPIR EPSRVVQAKP ARGQTGKKTA PSVKVVEPTM LVMKFPPGTS
0801: LPSAALLKAR FGRFGLLDQS AIRVFWKSST CRVVFLYKAD AQTAFRYATG NNTLFGNVNV KYFLRDVDAP KAEPREPENT KEDDEPQSQW LDQAPPLHQP
0901: TLPPPNVNLK SCLKKPVDDP SSSSNNGNGN RAAVRVKFML GGEENSSKAN TEPPQVTMTL NRNSGPSSSS SSVPMEFVSK KFQNVVHHQQ LPPSTLPPIL
1001: PLPPQYTKPQ QLPIKPVDHV EPPMPPSRNF RGPIPAVSAG DISHQMLNLL SKCNEVVANV TGLLGYVPYH PL
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K4D6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.