Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P23960_001 | Banana | nucleus | 58.01 | 57.56 |
| PGSC0003DMT400063505 | Potato | nucleus | 13.57 | 36.7 |
| Zm00001d024841_P001 | Maize | nucleus | 26.65 | 31.88 |
| KRH33902 | Soybean | nucleus | 32.45 | 31.58 |
| CDX99976 | Canola | nucleus | 28.42 | 30.88 |
| KRG92886 | Soybean | nucleus | 31.86 | 30.68 |
| KRG96822 | Soybean | nucleus | 30.88 | 29.21 |
| Os05t0149200-01 | Rice | plastid | 10.72 | 29.14 |
| AT5G27650.1 | Thale cress | nucleus | 30.09 | 28.54 |
| Solyc01g099360.2.1 | Tomato | nucleus | 27.83 | 28.1 |
| CDY19729 | Canola | nucleus | 28.32 | 28.07 |
| Bra036620.1-P | Field mustard | nucleus | 28.22 | 27.86 |
| OQU77406 | Sorghum | nucleus | 27.04 | 26.75 |
| AT3G05430.1 | Thale cress | nucleus | 24.98 | 26.32 |
| Zm00001d010869_P001 | Maize | nucleus | 25.37 | 26.19 |
| TraesCS1A01G089100.1 | Wheat | plastid | 27.53 | 25.81 |
| VIT_14s0060g02400.t01 | Wine grape | nucleus | 31.66 | 25.74 |
| TraesCS1B01G116700.1 | Wheat | plastid | 26.84 | 25.3 |
| HORVU1Hr1G020500.2 | Barley | nucleus, plastid | 27.04 | 25.25 |
| TraesCS1D01G097400.1 | Wheat | plastid | 24.78 | 24.18 |
| GSMUA_Achr10P... | Banana | nucleus | 10.32 | 14.81 |
| GSMUA_Achr9P04320_001 | Banana | nucleus | 10.91 | 14.53 |
| GSMUA_Achr8P02720_001 | Banana | nucleus | 10.62 | 12.84 |
| GSMUA_Achr11P... | Banana | nucleus | 8.85 | 12.33 |
| GSMUA_Achr5P29300_001 | Banana | nucleus | 13.27 | 8.53 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P06730_001 | EnsemblPlants:GSMUA_Achr8T06730_001 | EnsemblPlantsGene:GSMUA_Achr8G06730_001 | Gene3D:2.30.30.140 | InterPro:IPR000313 | InterPro:PWWP_dom |
| PANTHER:PTHR10688 | PANTHER:PTHR10688:SF1 | PFAM:PF00855 | PFscan:PS50812 | SEG:seg | SMART:SM00293 |
| SUPFAM:SSF63748 | UniParc:UPI000295DD4B | UniProt:M0TN76 | MapMan:35.2 | : | : |
Description
Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G06730_001]
Coordinates
chr8:-:4374531..4380680
Molecular Weight (calculated)
108810.0 Da
IEP (calculated)
6.636
GRAVY (calculated)
-0.475
Length
1017 amino acids
Sequence
(BLAST)
(BLAST)
0001: MISVMNERDI GRSSADPSFG MGSPQEGTMA GDKAAADVGG HGSDESRVSM ELDPVELKSE VGGTVLELGV ADLSGPRKDA PVDAEAAMTE ARVLESDVGE
0101: GVSAAADAGA EILVADQEEG RDFDEDGLSD EAEVSDGVRI PHGAVGNWMN GFELGDMVWG KVKSHPWWPG HIFSEAFASP SVRRTKGEGH VLVAFFGDSS
0201: YGWFDPAELI PFDPHYAEKS KQTTLRPFVK AVEEAADETS RREALAVTCY CRNTVNIRPA RVPGYFYVDV PGFEPGGVYS SKQINSTRDK FSPEKALAFV
0301: LQTALDPLAG DQASIDQIKN IAMMFAYRRA VFEEFDETYA QAFGVEPVRP SSHTGSLSDQ PERFAPRATP LSGPLVVAEP LRHKKISSNA NKQLAPKAAK
0401: LPSSAKKNKY VLKRRDEQET PSTRDASYAP ASAAGGSNLG DYVLQKRTPT VVASADDKLP PQVSQDTGGD RPVPEQKTLP VAVDVPIVVS PRQAASQLGE
0501: IEFGKVDPAV AAAHVLAEVK DGYRAGLLAR PAEGWKSKDA KVTGGIMKKV KKRPREDGGS SVGPDGTAAD VEDPHGRSAG KPVSVEGESL RRGDGVARAM
0601: EPYASAILLP QIDLSSRSLQ LPELVSDLQE LALDPFYGMD RDAPWVALHV FLRFRSLVYQ KSLALPPASE AEAPDRAPPS ITKPPRASFR PDDPTVAGRK
0701: RTPSDRQEEM SAKKQKKMEK LKALAGEKKV TIIPKVPDAQ LQQQQQQLSA AASVSVGPAK PNNKAAEPIK KQEPLPPPPR APSPTTLVMK FPPRTTLPSV
0801: ASLKAKFARF GPLELSGFRV YWKSNTCKVV YKFKPDAEAA LNHARSNEMF GQVKVHYYLR DADAPLVPEP ASDAAGQRSE GPQFVRPGSG ASSGSVSFAL
0901: PPAGQLKSIL KKSSDEAGAG GGATGSRESP RVKFMLDNVD GKAEPPVVVA GNGPRGPAAA QSSDPPPHNY RQHGGEVEER GNPNGDFANQ MLSLLIRCSD
1001: IVSSVKSSLG YVPYHPL
0101: GVSAAADAGA EILVADQEEG RDFDEDGLSD EAEVSDGVRI PHGAVGNWMN GFELGDMVWG KVKSHPWWPG HIFSEAFASP SVRRTKGEGH VLVAFFGDSS
0201: YGWFDPAELI PFDPHYAEKS KQTTLRPFVK AVEEAADETS RREALAVTCY CRNTVNIRPA RVPGYFYVDV PGFEPGGVYS SKQINSTRDK FSPEKALAFV
0301: LQTALDPLAG DQASIDQIKN IAMMFAYRRA VFEEFDETYA QAFGVEPVRP SSHTGSLSDQ PERFAPRATP LSGPLVVAEP LRHKKISSNA NKQLAPKAAK
0401: LPSSAKKNKY VLKRRDEQET PSTRDASYAP ASAAGGSNLG DYVLQKRTPT VVASADDKLP PQVSQDTGGD RPVPEQKTLP VAVDVPIVVS PRQAASQLGE
0501: IEFGKVDPAV AAAHVLAEVK DGYRAGLLAR PAEGWKSKDA KVTGGIMKKV KKRPREDGGS SVGPDGTAAD VEDPHGRSAG KPVSVEGESL RRGDGVARAM
0601: EPYASAILLP QIDLSSRSLQ LPELVSDLQE LALDPFYGMD RDAPWVALHV FLRFRSLVYQ KSLALPPASE AEAPDRAPPS ITKPPRASFR PDDPTVAGRK
0701: RTPSDRQEEM SAKKQKKMEK LKALAGEKKV TIIPKVPDAQ LQQQQQQLSA AASVSVGPAK PNNKAAEPIK KQEPLPPPPR APSPTTLVMK FPPRTTLPSV
0801: ASLKAKFARF GPLELSGFRV YWKSNTCKVV YKFKPDAEAA LNHARSNEMF GQVKVHYYLR DADAPLVPEP ASDAAGQRSE GPQFVRPGSG ASSGSVSFAL
0901: PPAGQLKSIL KKSSDEAGAG GGATGSRESP RVKFMLDNVD GKAEPPVVVA GNGPRGPAAA QSSDPPPHNY RQHGGEVEER GNPNGDFANQ MLSLLIRCSD
1001: IVSSVKSSLG YVPYHPL
0001: MYKTKLIPVM NEDAVIVQQT DSIQDPKVTP DDTVVDSSGD VHEAIDDDVE ASSPMELDSA VTNDARVLES ERSEKDGVVG SEEEDEIKSE DVLIDKDDES
0101: SEVKEEEEEE DGSDDQSSEL GSEADEKELD LGLKEEKKGV SDYKSLLSEF DDYVASEKMG SGVSRALSYG FEVGDLVWGK VKSHPWWPGH IFNEAFASPS
0201: VRRMRRIDHV LVAFFGDSSY GWFDPAELIP FEPNLEEKSQ QTVSKHFVRA VEEAKDEASR RSALGLTCKC RNPYNFRPSN VEDYFAVDVP DYELQAVYSV
0301: DQIKNSRDKF LPAETISFVK QLALAPQECD PDSLKFMKKK AVVFAFRKSV FEEFDETYAQ AFGTKSPRSS VSTLEPHNRA PPRAPLSGPL VIAETLGDLK
0401: SSKKPTKVKV SKKKDKYLLK RRDEAGDKSV QFGEIEASSE ASHIQGIDGS LDGDFGLQRR APTLQTPMKD EKSGIVSMDF ASSNTAIPGK EFSASKPSLD
0501: EEKGLAEKSK ERMEERAAVL PEHGKSEAMA SLKPKEEAGT DLGSAGSSLQ PLLESHTSAS EGKSSTGSVI KKVKVAKRSS SEMSSENPPS EPKKKKKKKK
0601: EPDSDHPVKR KNLYSGEAGA KKLSQLGSAH LQTYMEADVP QLLSHLQDLS LDPFHGLSVA SFGTARKFFL RFRSLNYQKS LSVSSSDATV ENARDTKPSK
0701: PVKTVKRTED PSKAGKKRLS SDRQDEIPSA KKLKKTNQLK SMASEKKIIR EAKDSIKPIR EPSRVVQAKP ARGQTGKKTA PSVKVVEPTM LVMKFPPGTS
0801: LPSAALLKAR FGRFGLLDQS AIRVFWKSST CRVVFLYKAD AQTAFRYATG NNTLFGNVNV KYFLRDVDAP KAEPREPENT KEDDEPQSQW LDQAPPLHQP
0901: TLPPPNVNLK SCLKKPVDDP SSSSNNGNGN RAAVRVKFML GGEENSSKAN TEPPQVTMTL NRNSGPSSSS SSVPMEFVSK KFQNVVHHQQ LPPSTLPPIL
1001: PLPPQYTKPQ QLPIKPVDHV EPPMPPSRNF RGPIPAVSAG DISHQMLNLL SKCNEVVANV TGLLGYVPYH PL
0101: SEVKEEEEEE DGSDDQSSEL GSEADEKELD LGLKEEKKGV SDYKSLLSEF DDYVASEKMG SGVSRALSYG FEVGDLVWGK VKSHPWWPGH IFNEAFASPS
0201: VRRMRRIDHV LVAFFGDSSY GWFDPAELIP FEPNLEEKSQ QTVSKHFVRA VEEAKDEASR RSALGLTCKC RNPYNFRPSN VEDYFAVDVP DYELQAVYSV
0301: DQIKNSRDKF LPAETISFVK QLALAPQECD PDSLKFMKKK AVVFAFRKSV FEEFDETYAQ AFGTKSPRSS VSTLEPHNRA PPRAPLSGPL VIAETLGDLK
0401: SSKKPTKVKV SKKKDKYLLK RRDEAGDKSV QFGEIEASSE ASHIQGIDGS LDGDFGLQRR APTLQTPMKD EKSGIVSMDF ASSNTAIPGK EFSASKPSLD
0501: EEKGLAEKSK ERMEERAAVL PEHGKSEAMA SLKPKEEAGT DLGSAGSSLQ PLLESHTSAS EGKSSTGSVI KKVKVAKRSS SEMSSENPPS EPKKKKKKKK
0601: EPDSDHPVKR KNLYSGEAGA KKLSQLGSAH LQTYMEADVP QLLSHLQDLS LDPFHGLSVA SFGTARKFFL RFRSLNYQKS LSVSSSDATV ENARDTKPSK
0701: PVKTVKRTED PSKAGKKRLS SDRQDEIPSA KKLKKTNQLK SMASEKKIIR EAKDSIKPIR EPSRVVQAKP ARGQTGKKTA PSVKVVEPTM LVMKFPPGTS
0801: LPSAALLKAR FGRFGLLDQS AIRVFWKSST CRVVFLYKAD AQTAFRYATG NNTLFGNVNV KYFLRDVDAP KAEPREPENT KEDDEPQSQW LDQAPPLHQP
0901: TLPPPNVNLK SCLKKPVDDP SSSSNNGNGN RAAVRVKFML GGEENSSKAN TEPPQVTMTL NRNSGPSSSS SSVPMEFVSK KFQNVVHHQQ LPPSTLPPIL
1001: PLPPQYTKPQ QLPIKPVDHV EPPMPPSRNF RGPIPAVSAG DISHQMLNLL SKCNEVVANV TGLLGYVPYH PL
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K4D6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.