Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P02720_001 | Banana | nucleus | 23.45 | 44.11 |
| Bra028857.1-P | Field mustard | nucleus | 9.86 | 33.91 |
| Os05t0463500-01 | Rice | nucleus | 9.73 | 33.55 |
| CDY04873 | Canola | nucleus | 9.73 | 33.48 |
| CDY55692 | Canola | nucleus | 9.54 | 33.33 |
| HORVU1Hr1G071710.17 | Barley | endoplasmic reticulum | 10.56 | 30.31 |
| GSMUA_Achr9P04320_001 | Banana | nucleus | 14.48 | 29.97 |
| KRH32403 | Soybean | nucleus | 11.44 | 26.97 |
| AT5G02950.2 | Thale cress | nucleus | 10.56 | 26.42 |
| TraesCS1D01G287200.1 | Wheat | nucleus | 12.39 | 25.82 |
| TraesCS1B01G297600.1 | Wheat | nucleus | 12.07 | 25.78 |
| TraesCS1A01G288200.1 | Wheat | nucleus | 11.95 | 24.84 |
| Os05t0463400-01 | Rice | nucleus | 9.61 | 24.48 |
| KRH19811 | Soybean | nucleus | 11.82 | 24.04 |
| VIT_08s0040g02440.t01 | Wine grape | nucleus | 13.34 | 23.76 |
| KRH33337 | Soybean | nucleus | 15.11 | 23.45 |
| GSMUA_Achr10P... | Banana | nucleus | 10.3 | 22.99 |
| CDX73990 | Canola | nucleus | 8.41 | 22.97 |
| KRH70385 | Soybean | nucleus | 14.66 | 22.86 |
| PGSC0003DMT400087303 | Potato | nucleus | 11.13 | 22.83 |
| CDY07935 | Canola | nucleus | 7.96 | 22.3 |
| KRH34572 | Soybean | nucleus | 11.38 | 22.11 |
| TraesCS1D01G287400.1 | Wheat | nucleus | 16.62 | 21.86 |
| TraesCS1A01G288400.1 | Wheat | nucleus | 16.37 | 21.6 |
| GSMUA_Achr11P... | Banana | nucleus | 9.86 | 21.37 |
| TraesCS1B01G297800.1 | Wheat | nucleus | 16.12 | 21.32 |
| OQU78150 | Sorghum | nucleus | 17.64 | 20.14 |
| AT3G09670.1 | Thale cress | nucleus | 9.17 | 19.97 |
| Solyc04g049950.1.1 | Tomato | nucleus | 5.69 | 19.87 |
| HORVU1Hr1G071590.1 | Barley | nucleus | 15.99 | 19.83 |
| Zm00001d038396_P003 | Maize | nucleus | 16.75 | 19.63 |
| Bra001301.1-P | Field mustard | nucleus | 3.86 | 18.05 |
| Zm00001d010556_P002 | Maize | nucleus | 17.19 | 14.66 |
| PGSC0003DMT400027409 | Potato | nucleus | 14.41 | 13.77 |
| GSMUA_Achr8P06730_001 | Banana | nucleus | 8.53 | 13.27 |
| VIT_13s0019g03620.t01 | Wine grape | nucleus | 15.61 | 13.16 |
| GSMUA_Achr3P23960_001 | Banana | nucleus | 8.09 | 12.49 |
| KRG92228 | Soybean | nucleus | 13.27 | 12.03 |
| Solyc09g007340.2.1 | Tomato | cytosol | 13.53 | 10.1 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P29300_001 | EnsemblPlants:GSMUA_Achr5T29300_001 | EnsemblPlantsGene:GSMUA_Achr5G29300_001 | Gene3D:2.30.30.140 | InterPro:IPR000313 | InterPro:PWWP_dom |
| ncoils:Coil | PANTHER:PTHR42851 | PANTHER:PTHR42851:SF4 | PFAM:PF00855 | PFscan:PS50812 | SEG:seg |
| SMART:SM00293 | SUPFAM:SSF63748 | UniParc:UPI00029660DD | UniProt:M0T2Q4 | MapMan:35.2 | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G29300_001]
Coordinates
chr5:-:29096182..29101869
Molecular Weight (calculated)
172299.0 Da
IEP (calculated)
4.313
GRAVY (calculated)
-0.582
Length
1582 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSVDTSDPGA IQDGVSAITN QTEVKEKQLS FQNGNKIVDG RLQPEVSALG SIVSELEKNS LDEEKLKAGF ANPAYLSGCD SSMNVVGLEA GKPDGVADQG
0101: DIEIGVAESD RKELAGEGIS SIEIASQVIS HDLVDIHLEP TEVDLGANAL DARCAMGAAE SDSLVTLASV EAESSGGTRG QRRTQVDALE IGIGNELPGH
0201: GLSIVKENQN LINEAVDHPE VDKHLHESEG VLRPGDTDQN EELIVESSFV VDETEDILTV AINQYNESKE LDRKPEASRL SLLDADGGRA SFSEMSFASL
0301: SQNIQDKEND IHEKELRKVD PLLVDRSKTD KISDDKRDSD LTDPKEVNIL GKNPLGEYLL DVGDLVSTGP DTAANVQVVK TDSGDIHLLY DNQETESQTF
0401: MEDVNLSVEI SMSRTSESFQ IENVPSGIEF AHVVVNESQE TESQNVSSLA TSNHFTNDIG ENCYPGSLQN MVTEYNVCKE DESPTTEFCQ NVETGRNLEA
0501: DQEFVLGGSI LNVSPDAGTH DNERMVVDEQ ETSKGTDKQA VEHVATRPNI SVENSDEHPC YYLPSKDEDS FCTSDLVWGK VKSHPWWPGQ IFDPSDASDL
0601: ALRHQKKDNF LVAYFGDKTF AWCDESQLKH FETYFSQMEK QSNSDVFVDA IDGALDEVAR RMGLGMTCSC FPEAANANSS DQKVENAGIR EDSNGCNVDR
0701: SAILSYFQPG RLLEYVKALA KFPDYGTDSL ELVIVNAQLK AFFRSKGYPE LPSFKFISGL SENDAEISDS KSEGIMEVTI EQSGPINVLE DGKKQKNLSE
0801: LMEVECSQLA NGANTEFGIK VDESDSLYSN KKRKATDSDS SDSEKGKKKR LDSLGDLQNK LPSLAISSSF KIGECIRRVA SQLTGAPPIL KGHSEASLKN
0901: VSKDDIRDYC VSTSYSEKKH PEKTGGRRGR KRKVDNQFSV LEMTELDHMQ DSYWSDLISH SGPAKSKGEA QTRSQRKKRK SSGQTSSTLV LVPVLQGAEH
1001: IHVGKIVPNI RQTAPIDRPI ISVEEKMVDE FMPTALVLNF NGSSSLPSET DLIRIFSRYG PLKEAATEVQ QKNNRVVVVF KRRADAEIAF SNAGKYSIFG
1101: PSLLSYRLRY FPSTPDAFPD SKQLDKTDAL PVEKSNLNTP ANVHPSMSIA SPDTGLRDKS DTVLMGSSST NIPVDLHPSM SSTCPDTNLQ DKSDLVPTEN
1201: SSANDPSDLH PSISDAYADT NLLDKNGAAV LELSDLHPLM SDGSPDTNLQ EKSDAVPTEN SSANNPSNLH PSVSDAYLDT NLLDKNDTAV FEHSSISLPS
1301: NLDGSPGTNL QEKSDAVCTE NSSANNPSNF HPSMSDAYLD TNLLDKNDAA VLEHSNISLP SDLHPLMSDG SPDANLQDTS DAMPTENSST NNPSYLHPPM
1401: PYLDTNIRDK NDAAVLEHSN TSLPRDLHPP MSDGSLDVNL EDNSDVILTE NSDIPSHPYP SMCNASPDIS LQDKSDITNV AGNFHLSTLD ASPDTNFQDK
1501: NDGILRESCS TTIPGNLDPS TVDGSLNKPE NKGNAAPVED HGINISVSVL LMRNIGLQEY TCSCKCLFCF STSRERKCPG CY
0101: DIEIGVAESD RKELAGEGIS SIEIASQVIS HDLVDIHLEP TEVDLGANAL DARCAMGAAE SDSLVTLASV EAESSGGTRG QRRTQVDALE IGIGNELPGH
0201: GLSIVKENQN LINEAVDHPE VDKHLHESEG VLRPGDTDQN EELIVESSFV VDETEDILTV AINQYNESKE LDRKPEASRL SLLDADGGRA SFSEMSFASL
0301: SQNIQDKEND IHEKELRKVD PLLVDRSKTD KISDDKRDSD LTDPKEVNIL GKNPLGEYLL DVGDLVSTGP DTAANVQVVK TDSGDIHLLY DNQETESQTF
0401: MEDVNLSVEI SMSRTSESFQ IENVPSGIEF AHVVVNESQE TESQNVSSLA TSNHFTNDIG ENCYPGSLQN MVTEYNVCKE DESPTTEFCQ NVETGRNLEA
0501: DQEFVLGGSI LNVSPDAGTH DNERMVVDEQ ETSKGTDKQA VEHVATRPNI SVENSDEHPC YYLPSKDEDS FCTSDLVWGK VKSHPWWPGQ IFDPSDASDL
0601: ALRHQKKDNF LVAYFGDKTF AWCDESQLKH FETYFSQMEK QSNSDVFVDA IDGALDEVAR RMGLGMTCSC FPEAANANSS DQKVENAGIR EDSNGCNVDR
0701: SAILSYFQPG RLLEYVKALA KFPDYGTDSL ELVIVNAQLK AFFRSKGYPE LPSFKFISGL SENDAEISDS KSEGIMEVTI EQSGPINVLE DGKKQKNLSE
0801: LMEVECSQLA NGANTEFGIK VDESDSLYSN KKRKATDSDS SDSEKGKKKR LDSLGDLQNK LPSLAISSSF KIGECIRRVA SQLTGAPPIL KGHSEASLKN
0901: VSKDDIRDYC VSTSYSEKKH PEKTGGRRGR KRKVDNQFSV LEMTELDHMQ DSYWSDLISH SGPAKSKGEA QTRSQRKKRK SSGQTSSTLV LVPVLQGAEH
1001: IHVGKIVPNI RQTAPIDRPI ISVEEKMVDE FMPTALVLNF NGSSSLPSET DLIRIFSRYG PLKEAATEVQ QKNNRVVVVF KRRADAEIAF SNAGKYSIFG
1101: PSLLSYRLRY FPSTPDAFPD SKQLDKTDAL PVEKSNLNTP ANVHPSMSIA SPDTGLRDKS DTVLMGSSST NIPVDLHPSM SSTCPDTNLQ DKSDLVPTEN
1201: SSANDPSDLH PSISDAYADT NLLDKNGAAV LELSDLHPLM SDGSPDTNLQ EKSDAVPTEN SSANNPSNLH PSVSDAYLDT NLLDKNDTAV FEHSSISLPS
1301: NLDGSPGTNL QEKSDAVCTE NSSANNPSNF HPSMSDAYLD TNLLDKNDAA VLEHSNISLP SDLHPLMSDG SPDANLQDTS DAMPTENSST NNPSYLHPPM
1401: PYLDTNIRDK NDAAVLEHSN TSLPRDLHPP MSDGSLDVNL EDNSDVILTE NSDIPSHPYP SMCNASPDIS LQDKSDITNV AGNFHLSTLD ASPDTNFQDK
1501: NDGILRESCS TTIPGNLDPS TVDGSLNKPE NKGNAAPVED HGINISVSVL LMRNIGLQEY TCSCKCLFCF STSRERKCPG CY
001: MSTESERIES VSEANASSLE VGNDQMSEAL AGQAQELKTI GDDKEGCGNF ASAGDNGMEK VNGFTNLVKE TESVNGELDL GTRTENVGGE SNQSDKKVLV
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF36]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.