Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73990 | Canola | nucleus | 94.97 | 55.44 |
| AT3G09670.1 | Thale cress | nucleus | 38.76 | 18.04 |
| Bra028857.1-P | Field mustard | nucleus | 21.3 | 15.65 |
| HORVU1Hr1G012310.1 | Barley | cytosol, nucleus | 13.91 | 12.4 |
| HORVU1Hr1G012320.1 | Barley | cytosol, nucleus | 13.02 | 11.7 |
| TraesCS1A01G059700.1 | Wheat | cytosol | 11.83 | 10.75 |
| HORVU3Hr1G117740.2 | Barley | nucleus | 4.73 | 8.33 |
| VIT_08s0040g02440.t01 | Wine grape | nucleus | 21.3 | 8.11 |
| TraesCS1D01G060800.1 | Wheat | cytosol | 13.02 | 8.06 |
| KRH32403 | Soybean | nucleus | 15.98 | 8.05 |
| GSMUA_Achr10P... | Banana | nucleus | 16.86 | 8.04 |
| Bra025306.1-P | Field mustard | nucleus | 12.13 | 7.75 |
| HORVU1Hr1G071710.17 | Barley | endoplasmic reticulum | 12.43 | 7.62 |
| TraesCS1B01G077900.1 | Wheat | nucleus | 12.43 | 7.54 |
| TraesCS1D01G060900.1 | Wheat | nucleus | 12.13 | 7.54 |
| KRH19811 | Soybean | nucleus | 17.16 | 7.46 |
| Zm00001d010984_P001 | Maize | plastid | 11.24 | 7.44 |
| TraesCS1A01G059600.1 | Wheat | cytosol | 11.54 | 7.13 |
| TraesCS1B01G077800.1 | Wheat | cytosol | 11.54 | 7.08 |
| Os05t0122500-00 | Rice | nucleus | 10.95 | 7.02 |
| PGSC0003DMT400087303 | Potato | nucleus | 15.98 | 7.0 |
| GSMUA_Achr11P... | Banana | nucleus | 15.09 | 6.99 |
| Os05t0463500-01 | Rice | nucleus | 9.47 | 6.97 |
| EES18937 | Sorghum | nucleus, plastid | 10.36 | 6.92 |
| GSMUA_Achr9P04320_001 | Banana | nucleus | 14.79 | 6.54 |
| GSMUA_Achr8P02720_001 | Banana | nucleus | 16.27 | 6.54 |
| TraesCS1D01G287200.1 | Wheat | nucleus | 13.61 | 6.06 |
| Bra028455.1-P | Field mustard | nucleus | 15.09 | 5.74 |
| Zm00001d041940_P001 | Maize | nucleus | 14.2 | 5.67 |
| TraesCS1B01G297600.1 | Wheat | nucleus | 12.13 | 5.53 |
| TraesCS1A01G288200.1 | Wheat | nucleus | 12.43 | 5.52 |
| Os11t0303500-01 | Rice | nucleus | 11.54 | 5.39 |
| Os05t0463400-01 | Rice | nucleus | 9.76 | 5.31 |
| Zm00001d011770_P001 | Maize | nucleus | 13.91 | 5.29 |
| KXG34235 | Sorghum | nucleus | 12.72 | 4.82 |
| Bra036620.1-P | Field mustard | nucleus | 13.61 | 4.47 |
| TraesCS1B01G297800.1 | Wheat | nucleus | 15.09 | 4.26 |
| OQU78150 | Sorghum | nucleus | 17.46 | 4.26 |
| TraesCS1D01G287400.1 | Wheat | nucleus | 15.09 | 4.24 |
| TraesCS1A01G288400.1 | Wheat | nucleus | 14.79 | 4.17 |
| HORVU1Hr1G071590.1 | Barley | nucleus | 15.09 | 4.0 |
| GSMUA_Achr5P29300_001 | Banana | nucleus | 18.05 | 3.86 |
| Zm00001d038396_P003 | Maize | nucleus | 14.79 | 3.7 |
| HORVU3Hr1G117730.2 | Barley | nucleus, plastid | 17.75 | 3.41 |
| TraesCS3B01G603600.1 | Wheat | nucleus | 15.09 | 3.36 |
| Zm00001d010556_P002 | Maize | nucleus | 15.68 | 2.86 |
| Solyc09g007340.2.1 | Tomato | cytosol | 17.46 | 2.78 |
| Bra018079.1-P | Field mustard | nucleus | 6.51 | 2.46 |
| TraesCS3D01G543800.1 | Wheat | nucleus | 8.28 | 1.83 |
| TraesCS3B01G603700.1 | Wheat | nucleus | 0.89 | 1.55 |
Protein Annotations
Description
AT3G09670 (E=3e-059) | PWWP domain-containing protein
Coordinates
chrA03:-:15753440..15754456
Molecular Weight (calculated)
37075.9 Da
IEP (calculated)
9.877
GRAVY (calculated)
-0.838
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPGVREESS RVQGGDKVSS VVVFEPAKLV EYVKGLACAP RYDASDELMF VSQRARLLAF SRWKGFIELP EFETLQGSLE SAPKMKESAP EPKKSTKRRK
101: TEDKDDGVFE YEDTAVLKKK EKKTLAEFIA EIRLSKSNGK RSHGEKKRKV VDTKLTKSAK KMKVNVQKED SGSPVSLKND QKVTPKKAKT SFGIGASILR
201: VANQMHCSTT PTGLVPCSKS NGSGKSLQGR SKPEALSKRK TSPNETLSSI HSASATKASN EKANLISIDK LQSGEFEHVE DSKLEESGDL KGSSEEQMAN
301: KDKEEAANVV GEMTTEESNL TEEKTTGSVL KEQLVNKN
101: TEDKDDGVFE YEDTAVLKKK EKKTLAEFIA EIRLSKSNGK RSHGEKKRKV VDTKLTKSAK KMKVNVQKED SGSPVSLKND QKVTPKKAKT SFGIGASILR
201: VANQMHCSTT PTGLVPCSKS NGSGKSLQGR SKPEALSKRK TSPNETLSSI HSASATKASN EKANLISIDK LQSGEFEHVE DSKLEESGDL KGSSEEQMAN
301: KDKEEAANVV GEMTTEESNL TEEKTTGSVL KEQLVNKN
001: MSTESERIES VSEANASSLE VGNDQMSEAL AGQAQELKTI GDDKEGCGNF ASAGDNGMEK VNGFTNLVKE TESVNGELDL GTRTENVGGE SNQSDKKVLV
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF36]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.