Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038396_P003 | Maize | nucleus | 53.72 | 55.11 |
| Os05t0463500-01 | Rice | nucleus | 15.52 | 46.84 |
| Zm00001d010556_P002 | Maize | nucleus | 58.27 | 43.48 |
| TraesCS1A01G288400.1 | Wheat | nucleus | 34.44 | 39.78 |
| TraesCS1D01G287400.1 | Wheat | nucleus | 34.01 | 39.15 |
| TraesCS1B01G297800.1 | Wheat | nucleus | 33.57 | 38.88 |
| HORVU1Hr1G071590.1 | Barley | nucleus | 32.71 | 35.5 |
| Bra028857.1-P | Field mustard | nucleus | 9.96 | 30.0 |
| CDY04873 | Canola | nucleus | 9.89 | 29.78 |
| CDY55692 | Canola | nucleus | 9.39 | 28.7 |
| GSMUA_Achr8P02720_001 | Banana | nucleus | 16.53 | 27.23 |
| KRH32403 | Soybean | nucleus | 12.56 | 25.93 |
| Solyc04g049950.1.1 | Tomato | nucleus | 7.87 | 24.06 |
| AT5G02950.2 | Thale cress | nucleus | 10.76 | 23.58 |
| PGSC0003DMT400087303 | Potato | nucleus | 13.07 | 23.48 |
| KRH34572 | Soybean | nucleus | 13.57 | 23.1 |
| KRH19811 | Soybean | nucleus | 12.85 | 22.88 |
| KRH70385 | Soybean | nucleus | 16.75 | 22.86 |
| CDX73990 | Canola | nucleus | 9.39 | 22.45 |
| VIT_08s0040g02440.t01 | Wine grape | nucleus | 14.15 | 22.07 |
| CDY07935 | Canola | nucleus | 8.88 | 21.77 |
| KRH33337 | Soybean | nucleus | 15.96 | 21.69 |
| EES18937 | Sorghum | nucleus, plastid | 7.8 | 21.34 |
| AT3G09670.1 | Thale cress | nucleus | 9.89 | 18.87 |
| GSMUA_Achr5P29300_001 | Banana | nucleus | 20.14 | 17.64 |
| Bra001301.1-P | Field mustard | nucleus | 4.26 | 17.46 |
| KXG34235 | Sorghum | nucleus | 11.19 | 17.36 |
| PGSC0003DMT400027409 | Potato | nucleus | 14.44 | 12.08 |
| KRG92228 | Soybean | nucleus | 15.02 | 11.92 |
| VIT_13s0019g03620.t01 | Wine grape | nucleus | 15.74 | 11.61 |
| OQU77406 | Sorghum | nucleus | 7.94 | 10.7 |
| Solyc09g007340.2.1 | Tomato | cytosol | 15.23 | 9.96 |
Protein Annotations
| EnsemblPlants:OQU78150 | EnsemblPlantsGene:SORBI_3009G166100 | Gene3D:2.30.30.140 | InterPro:IPR000313 | InterPro:PWWP_dom | PANTHER:PTHR42851 |
| PANTHER:PTHR42851:SF4 | PFAM:PF00855 | PFscan:PS50812 | ProteinID:OQU78150 | ProteinID:OQU78150.1 | SEG:seg |
| SMART:SM00293 | SUPFAM:SSF63748 | UniParc:UPI000B8BAA9A | UniProt:A0A1Z5R344 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr9:+:52240032..52247526
Molecular Weight (calculated)
149387.0 Da
IEP (calculated)
4.160
GRAVY (calculated)
-0.664
Length
1385 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSGAVAASD PGGGEAKLVA GADVTMSEAE GEVPAFAADV KVEGKAPLAM DVAHEGGDVA VTDPLYATES AGMVGAEGPA EEHMEGVEAV NGEDNGEEGT
0101: LEAGAGGLLT ETERKPVLEV DVAAAAADSA TPEHNEAESS ELEENHVNAE PVRKNNESDN GLAHSDTEIQ NNVPGDIEGS SKEHEGDGAP AVDQPDNASE
0201: MLPQTTEQLP ESGNGPDSNL EAANLGNVHQ GARYCLPPLD KGGFQVTDLV WGKVKSHPWW PGEIFDPSDA SELALKHQKK GSHLVAYFGD NTFAWCDESQ
0301: LKPFVTNYSQ MEKQSTSDAF VGSVNNALEE LSRRILSGMS CSCLPEELAD NGMSYTVDNA GLKDGVTCSA VNRPEILNCF SPQNLLHYIK ELALFPGQGG
0401: DLLELVIACS QLTSFYRSKG CPELASFQTG DAWVEDGDGL DGTDTLSTQN VMVEEPVVNE VRPTQEKPKR GRGRPRKQKP GDGQVVMEKR STSNQVNVTS
0501: YVEKQVGLEF DDYDTLQNKK KRNFDSFEDS EKSSAPTGGS SFKIGECIRR AASQLTGSSS IMKAQNEPSA YKYAAEGENG EFDISSDDAG DELTVEKRAK
0601: RRRMHRNHTA DPKELLSQLC MVATEPMNGY SFSPMIISYF NDYRNYIVST TTEANIVDKG TSRRGRKRKE VLASPEVETT DHMQDSYWSG LSLHNHPIND
0701: LRKESPNTRP RRRRRSSRHA YEPLSELGDP VPKKQIQVME RSIIHVDEKM VDELKPTALV LSFGRSAALP SELDLVKMFS RYGPLKEGET EVHKETKTVK
0801: VVFKKRADAE RAFSVAGKYG TFGPSLRSYR LVNMPFSLET PSGNNPVKHP EDCGMEIPGS TKSEVRKDSM EVDLVQKTDK VEVAGELSSE EVETVRQTSQ
0901: VEAADSAFVS QVDSLEKAGN IDAELIDHAN QIGKGTEAAS VPEVSSQQVG NVEEAYTQKE VSISDLPTET ETLHSDAIIK ELPQNDAPDN MQTDAVEAPK
1001: QSHISGDNTV FEADTEAPST AQDHTEDDTG NEVLEEHMVS PELLQSQTSG EKLVGKTATE QKVGPEDPES QSENFAAEPE PFVQGAVEQV EVEVESKTTV
1101: EVSGEQGCSI EQTVQVEAVI EASGGQLEVE RQISEDESMA DATTEHSTVM VDETVEAEVV PVQEHTENAA AAAVGVVEET AEGETKEEAP EEKGKIENED
1201: YADKLAEATR AGEVTVETPD EKTENKADVD TLAGETKEVE ITVGAPDEKI ENEAIGETIE GQTTAGAPVE EAITAEEMVE DVKVLDDKPA AAEKPVEDVK
1301: VLDDKPAAAE KPVENATVVT HENSTVEKTL QDAIAPADTN TTLGEAPTVE KTIEDTSVEA PDAQAGASNG FDQQDRVQGS CAERQ
0101: LEAGAGGLLT ETERKPVLEV DVAAAAADSA TPEHNEAESS ELEENHVNAE PVRKNNESDN GLAHSDTEIQ NNVPGDIEGS SKEHEGDGAP AVDQPDNASE
0201: MLPQTTEQLP ESGNGPDSNL EAANLGNVHQ GARYCLPPLD KGGFQVTDLV WGKVKSHPWW PGEIFDPSDA SELALKHQKK GSHLVAYFGD NTFAWCDESQ
0301: LKPFVTNYSQ MEKQSTSDAF VGSVNNALEE LSRRILSGMS CSCLPEELAD NGMSYTVDNA GLKDGVTCSA VNRPEILNCF SPQNLLHYIK ELALFPGQGG
0401: DLLELVIACS QLTSFYRSKG CPELASFQTG DAWVEDGDGL DGTDTLSTQN VMVEEPVVNE VRPTQEKPKR GRGRPRKQKP GDGQVVMEKR STSNQVNVTS
0501: YVEKQVGLEF DDYDTLQNKK KRNFDSFEDS EKSSAPTGGS SFKIGECIRR AASQLTGSSS IMKAQNEPSA YKYAAEGENG EFDISSDDAG DELTVEKRAK
0601: RRRMHRNHTA DPKELLSQLC MVATEPMNGY SFSPMIISYF NDYRNYIVST TTEANIVDKG TSRRGRKRKE VLASPEVETT DHMQDSYWSG LSLHNHPIND
0701: LRKESPNTRP RRRRRSSRHA YEPLSELGDP VPKKQIQVME RSIIHVDEKM VDELKPTALV LSFGRSAALP SELDLVKMFS RYGPLKEGET EVHKETKTVK
0801: VVFKKRADAE RAFSVAGKYG TFGPSLRSYR LVNMPFSLET PSGNNPVKHP EDCGMEIPGS TKSEVRKDSM EVDLVQKTDK VEVAGELSSE EVETVRQTSQ
0901: VEAADSAFVS QVDSLEKAGN IDAELIDHAN QIGKGTEAAS VPEVSSQQVG NVEEAYTQKE VSISDLPTET ETLHSDAIIK ELPQNDAPDN MQTDAVEAPK
1001: QSHISGDNTV FEADTEAPST AQDHTEDDTG NEVLEEHMVS PELLQSQTSG EKLVGKTATE QKVGPEDPES QSENFAAEPE PFVQGAVEQV EVEVESKTTV
1101: EVSGEQGCSI EQTVQVEAVI EASGGQLEVE RQISEDESMA DATTEHSTVM VDETVEAEVV PVQEHTENAA AAAVGVVEET AEGETKEEAP EEKGKIENED
1201: YADKLAEATR AGEVTVETPD EKTENKADVD TLAGETKEVE ITVGAPDEKI ENEAIGETIE GQTTAGAPVE EAITAEEMVE DVKVLDDKPA AAEKPVEDVK
1301: VLDDKPAAAE KPVENATVVT HENSTVEKTL QDAIAPADTN TTLGEAPTVE KTIEDTSVEA PDAQAGASNG FDQQDRVQGS CAERQ
001: MSTESERIES VSEANASSLE VGNDQMSEAL AGQAQELKTI GDDKEGCGNF ASAGDNGMEK VNGFTNLVKE TESVNGELDL GTRTENVGGE SNQSDKKVLV
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF36]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.