Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34572 | Soybean | nucleus | 22.75 | 48.77 |
| KRH33337 | Soybean | nucleus | 20.97 | 35.92 |
| KRH70385 | Soybean | nucleus | 19.77 | 33.99 |
| Solyc04g049950.1.1 | Tomato | nucleus | 7.45 | 28.7 |
| KRH32403 | Soybean | nucleus | 10.37 | 26.97 |
| HORVU3Hr1G117740.2 | Barley | nucleus | 2.81 | 25.52 |
| HORVU1Hr1G071710.17 | Barley | endoplasmic reticulum | 7.11 | 22.5 |
| KRH19811 | Soybean | nucleus | 9.97 | 22.36 |
| TraesCS1A01G059700.1 | Wheat | cytosol | 4.53 | 21.24 |
| HORVU1Hr1G012310.1 | Barley | cytosol, nucleus | 4.58 | 21.11 |
| Os05t0122500-00 | Rice | nucleus | 6.36 | 21.06 |
| GSMUA_Achr8P02720_001 | Banana | nucleus | 10.14 | 21.05 |
| Os05t0463500-01 | Rice | nucleus | 5.44 | 20.7 |
| Zm00001d010984_P001 | Maize | plastid | 6.02 | 20.55 |
| TraesCS1B01G077800.1 | Wheat | cytosol | 6.48 | 20.51 |
| TraesCS1A01G059600.1 | Wheat | cytosol | 6.42 | 20.48 |
| GSMUA_Achr9P04320_001 | Banana | nucleus | 8.88 | 20.29 |
| EES18937 | Sorghum | nucleus, plastid | 5.85 | 20.16 |
| TraesCS1D01G060800.1 | Wheat | cytosol | 6.3 | 20.15 |
| TraesCS1B01G077900.1 | Wheat | nucleus | 6.42 | 20.11 |
| TraesCS1D01G060900.1 | Wheat | nucleus | 6.02 | 19.3 |
| HORVU1Hr1G012320.1 | Barley | cytosol, nucleus | 4.13 | 19.15 |
| TraesCS1B01G297600.1 | Wheat | nucleus | 7.91 | 18.62 |
| GSMUA_Achr10P... | Banana | nucleus | 7.56 | 18.62 |
| KRH56588 | Soybean | nucleus | 7.45 | 18.21 |
| TraesCS1D01G287200.1 | Wheat | nucleus | 7.79 | 17.92 |
| KXG34235 | Sorghum | nucleus | 9.17 | 17.92 |
| TraesCS1A01G288200.1 | Wheat | nucleus | 7.79 | 17.87 |
| Zm00001d041940_P001 | Maize | nucleus | 8.08 | 16.65 |
| Zm00001d011770_P001 | Maize | nucleus | 8.42 | 16.54 |
| TraesCS1B01G297800.1 | Wheat | nucleus | 11.0 | 16.05 |
| Os05t0463400-01 | Rice | nucleus | 5.62 | 15.78 |
| HORVU1Hr1G071590.1 | Barley | nucleus | 11.4 | 15.6 |
| TraesCS1D01G287400.1 | Wheat | nucleus | 10.72 | 15.54 |
| TraesCS1A01G288400.1 | Wheat | nucleus | 10.49 | 15.26 |
| GSMUA_Achr11P... | Banana | nucleus | 6.36 | 15.21 |
| KRH07190 | Soybean | nucleus | 8.14 | 15.15 |
| OQU78150 | Sorghum | nucleus | 11.92 | 15.02 |
| KRG94143 | Soybean | nucleus | 7.91 | 14.89 |
| Zm00001d038396_P003 | Maize | nucleus | 11.35 | 14.67 |
| VIT_13s0019g03620.t01 | Wine grape | nucleus | 15.47 | 14.38 |
| PGSC0003DMT400027409 | Potato | nucleus | 13.47 | 14.19 |
| GSMUA_Achr5P29300_001 | Banana | nucleus | 12.03 | 13.27 |
| Os11t0303500-01 | Rice | nucleus | 5.39 | 12.98 |
| KRH33902 | Soybean | nucleus | 7.39 | 12.34 |
| KRG96822 | Soybean | nucleus | 7.34 | 11.91 |
| Zm00001d010556_P002 | Maize | nucleus | 12.61 | 11.85 |
| KRG92886 | Soybean | nucleus | 6.99 | 11.55 |
| TraesCS3B01G603700.1 | Wheat | nucleus | 1.26 | 11.4 |
| KRG93266 | Soybean | nucleus | 7.05 | 11.21 |
| TraesCS3B01G603600.1 | Wheat | nucleus | 7.62 | 8.77 |
| HORVU3Hr1G117730.2 | Barley | nucleus, plastid | 7.68 | 7.63 |
| KRH17636 | Soybean | nucleus | 3.04 | 7.1 |
| TraesCS3D01G543800.1 | Wheat | nucleus | 6.13 | 6.99 |
| KRG90051 | Soybean | nucleus | 2.87 | 6.49 |
Protein Annotations
| Gene3D:1.10.10.160 | Gene3D:1.10.486.10 | Gene3D:2.30.30.140 | Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A0R0EQM1 |
| EMBL:ACUP02012736 | ncoils:Coil | InterPro:DExx_box_DNA_helicase_dom_sf | InterPro:DNA_helicase_UvrD-like_C | EnsemblPlantsGene:GLYMA_20G198400 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0004003 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0032508 |
| InterPro:IPR000313 | InterPro:IPR013986 | InterPro:IPR014016 | InterPro:IPR014017 | EnsemblPlants:KRG92228 | ProteinID:KRG92228 |
| ProteinID:KRG92228.1 | InterPro:P-loop_NTPase | PFAM:PF00580 | PFAM:PF00855 | PFAM:PF13361 | PFscan:PS50812 |
| PFscan:PS51198 | PFscan:PS51217 | PANTHER:PTHR42851 | PANTHER:PTHR42851:SF4 | InterPro:PWWP_dom | SMART:SM00293 |
| SUPFAM:SSF52540 | SUPFAM:SSF63748 | UniParc:UPI0006ED4E2E | InterPro:UvrD-like_ATP-bd | InterPro:UvrD/AddA_N | SEG:seg |
Description
hypothetical protein
Coordinates
chr20:+:43598098..43629640
Molecular Weight (calculated)
195899.0 Da
IEP (calculated)
8.412
GRAVY (calculated)
-0.450
Length
1745 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVWGKVKSHP WWPGQIFDPS DSSVEAKKHL KKDRHLVAYF GDRTFAWNES SQLKLFRTHF SNVVKQSNSD AFQNAVDCAL DEVGRCAEFG LACSCIPKDT
0101: YDEIKLQTVQ NTGIREELSF TRRVDESLNA SSFSPENILE YLKTLSEFPT GGFDRLELLI AKAQLLAFYR LKGYSCLPEL QYCGVVDNDT DAFLIKDLIK
0201: GSDKSLSEVN KHATHASKKG QTGAGNLKTA NGSCLKRKHN LKDDLYPEKK KIILSEAAGG TPDSSLGNYQ PGDATDNLIS PASSKKRKTI DHCAGVSGMK
0301: DRRKTISLAK VSNTINQSFK IGERILRVAN QLTGPPSSML KCSGDRTQME DGSADGFPGN GSDVFSPNPE KTQKSSFTVP TEYSSLDDLL HLLQWVAHEP
0401: LGDYSSLNVI VSFFSDFRNS IIVANDSGKE NFPTKKVGAK RNKRPVGGSP ETFEFDDLSH THWTDMGIQS GSEKQQSQRS SRRDYQHAPA EPEKPFIVYT
0501: RRSYSRKQCS DSNHVAVPEK HSGCADENSP VELVLNFAEL DSVPSEMRLN KIFRRFGPLN ESETEVDRGS SRARVVFKKC VDAEVAFSSA KKFNIFGSVL
0601: VNYKLNHTPT LRILMHFSTR LLHSIQQSSR ISVFFSASKP LLPRKRPSDS SPLHPHRIKS AGDVASVSVA KRVPLAEVPL NRLNAIGSVH GPSPDAIHSS
0701: FSARTVSVPA VGSADENLCR SLFETPRREP EGSKPKQLDC FSTTGLLDDD FDDSFLEQID ILCEQKSAEQ QADRSSDEKL SSKSNVVGDV NLSSESGTVS
0801: EGIGNGHLLS SGIELDSREE EVDSSWRDLL NSTMPEEYLK YLKSLNDRQR EAACTDISTP LMIVAGPGSG KTSTMVGRVL MLLNEGISPS NILAMTFTTA
0901: AASEMRERIG AIAGKATAKE LTISTFHSFS LQLCRSHGEK LGRTSEFLIY GQGQQRNAII EAIRLLEIGK SENKDGALLI GELSNSLNNP KQFKDKAKKW
1001: QKFVAQAKAS GRTSAEYRKM GNEIGAAILK NYNNILKSCN ALDYHDLISC SVKLLSDFPE VFKECQDSWK AIVIDEFQDT SAMQYKFLKM LASHHKITIV
1101: GDDDQSIYSF NGADISGFIS FRNDFPNYKE IRLNKNYRST RCIVEAASSL IQNNSKRCQL KNVLTDNSSG SKIVMKECHN EDAQCAFVVD KIIEISSNYS
1201: AANCCYGNIA ILYRRQISGK AFQMAFRDRK IPFNIHGVAF YRKKVVRTIM AMLRTALPGC DDGSYSRVFK ALMPLEKDKK KRIIDHINKI STIRRCSFLS
1301: AASDIFSAKI SGTFKRSELT HGRKILMTLE MISKLIQREK SISAIISSVA NMIPEKYLLE QRAVVDVDGG TLLNEDYDIR SVLQYLLDDV SEFLSTKLVE
1401: VKEEREISED KGCIFVLKAF IDYLLEREKE NFGARRKDNE NSVTLTTIHQ AKGLEWDVVF IVKANDSEIP LLHDFKGTVK DTAALLEEER RLLYVAMTRA
1501: REKLFILHVM MDSNWQMLQP SRFLKEIPRH LTEVQGEISF QELLIKQEAL QKETAHCTTD LLIKEKQSEA DVIPMPHEIL DNHSSETSNE LAQFAEANNR
1601: NDFLRRFSVE NRSIVSHLFH QWAKKKAFQD PKRLLDKVSF VIDERLRQKR NKNKDLLNTL KSCLSCDEAF QYAQYVLRWE QIPADKRAHL MREKQEHFLK
1701: LKIENAMGSA TPTDKQISYL KKLGCTAIPT SRLHASHLIE QFKSL
0101: YDEIKLQTVQ NTGIREELSF TRRVDESLNA SSFSPENILE YLKTLSEFPT GGFDRLELLI AKAQLLAFYR LKGYSCLPEL QYCGVVDNDT DAFLIKDLIK
0201: GSDKSLSEVN KHATHASKKG QTGAGNLKTA NGSCLKRKHN LKDDLYPEKK KIILSEAAGG TPDSSLGNYQ PGDATDNLIS PASSKKRKTI DHCAGVSGMK
0301: DRRKTISLAK VSNTINQSFK IGERILRVAN QLTGPPSSML KCSGDRTQME DGSADGFPGN GSDVFSPNPE KTQKSSFTVP TEYSSLDDLL HLLQWVAHEP
0401: LGDYSSLNVI VSFFSDFRNS IIVANDSGKE NFPTKKVGAK RNKRPVGGSP ETFEFDDLSH THWTDMGIQS GSEKQQSQRS SRRDYQHAPA EPEKPFIVYT
0501: RRSYSRKQCS DSNHVAVPEK HSGCADENSP VELVLNFAEL DSVPSEMRLN KIFRRFGPLN ESETEVDRGS SRARVVFKKC VDAEVAFSSA KKFNIFGSVL
0601: VNYKLNHTPT LRILMHFSTR LLHSIQQSSR ISVFFSASKP LLPRKRPSDS SPLHPHRIKS AGDVASVSVA KRVPLAEVPL NRLNAIGSVH GPSPDAIHSS
0701: FSARTVSVPA VGSADENLCR SLFETPRREP EGSKPKQLDC FSTTGLLDDD FDDSFLEQID ILCEQKSAEQ QADRSSDEKL SSKSNVVGDV NLSSESGTVS
0801: EGIGNGHLLS SGIELDSREE EVDSSWRDLL NSTMPEEYLK YLKSLNDRQR EAACTDISTP LMIVAGPGSG KTSTMVGRVL MLLNEGISPS NILAMTFTTA
0901: AASEMRERIG AIAGKATAKE LTISTFHSFS LQLCRSHGEK LGRTSEFLIY GQGQQRNAII EAIRLLEIGK SENKDGALLI GELSNSLNNP KQFKDKAKKW
1001: QKFVAQAKAS GRTSAEYRKM GNEIGAAILK NYNNILKSCN ALDYHDLISC SVKLLSDFPE VFKECQDSWK AIVIDEFQDT SAMQYKFLKM LASHHKITIV
1101: GDDDQSIYSF NGADISGFIS FRNDFPNYKE IRLNKNYRST RCIVEAASSL IQNNSKRCQL KNVLTDNSSG SKIVMKECHN EDAQCAFVVD KIIEISSNYS
1201: AANCCYGNIA ILYRRQISGK AFQMAFRDRK IPFNIHGVAF YRKKVVRTIM AMLRTALPGC DDGSYSRVFK ALMPLEKDKK KRIIDHINKI STIRRCSFLS
1301: AASDIFSAKI SGTFKRSELT HGRKILMTLE MISKLIQREK SISAIISSVA NMIPEKYLLE QRAVVDVDGG TLLNEDYDIR SVLQYLLDDV SEFLSTKLVE
1401: VKEEREISED KGCIFVLKAF IDYLLEREKE NFGARRKDNE NSVTLTTIHQ AKGLEWDVVF IVKANDSEIP LLHDFKGTVK DTAALLEEER RLLYVAMTRA
1501: REKLFILHVM MDSNWQMLQP SRFLKEIPRH LTEVQGEISF QELLIKQEAL QKETAHCTTD LLIKEKQSEA DVIPMPHEIL DNHSSETSNE LAQFAEANNR
1601: NDFLRRFSVE NRSIVSHLFH QWAKKKAFQD PKRLLDKVSF VIDERLRQKR NKNKDLLNTL KSCLSCDEAF QYAQYVLRWE QIPADKRAHL MREKQEHFLK
1701: LKIENAMGSA TPTDKQISYL KKLGCTAIPT SRLHASHLIE QFKSL
0001: MENLPPNRGM WNQEYSHGRI SQSFRSAKPL LDRKRPIENA PNSSNPLPQR MKESMDTESV SHNINFNSTP LMELSANTPY KRLKPEIESY ADGHPCGLRT
0101: PPPRFDLDKE IINGFQTDIY ADVGSLSEAF VTPLKEPERV TLSNGCSTSS ILDDDFDDSI LEEIDLICEQ SARKAACQTP TTSIYQTPSK DNKSSDPKAS
0201: LDFRDVEKFE PDSNVKLKLD EETPTIAADP ALLNSMPDEC SKYMLSLNDR QRDAACSNIS TPLMVIAGPG SGKTSTMVGR VLVLLNEGLL PSNILAMTFT
0301: KAATSEMRER IGKSAGKKAA KDITISTFHS FSLQLCRMHA DKLQRTSEFS VYGHGQQRRA IIEAVRLYEE EKKNGSKTSV PCESGEGLNG AGAGAVCPEY
0401: AKDLSKKWQK FVTQGKASGK SPEQCRKMGN EIGAKILGNY NDILKACDAL DYHDLISCSV TLLSDFPEVF KECQDTWKAI IVDEFQDTST MQYKLLRMLG
0501: SHNHITIVGD DDQSIFGFNG ADSSGFDSFR RDFPNYKEVR LIKNYRSSRH IVEAASSIIK NNTKRCQSKS ISSENSQGSK ITVKECHNEE AQCAYVIDKI
0601: IEITNDGSTP CCSHGDIAIL YRRQVSGKVF QNAFRQRKIP FNVHGVAFYR KKVVQVILAM LKTTFSECDD ASYRRVFKAL LPFEKEEKKR IIEHIEKIST
0701: SRKCSFISAA SDIFNAKISG TFKRSQLTQG RKVLQTLDMV AKLVDREQSL SAVVTCVANM IPQKYLLEQR AVVDNDGGKL LNEDNDLRSV LQYLMDDVAE
0801: FISTHCTTTE EEDAIKEKKG CNQLHSFINY ISERETENFR SRRRDNENSV TLTTIHQSKG LEWDIVFIVK ANENEIPLLH ESNGNASESG TSLEEERRLL
0901: YVAMTRARKK LFFLYVTVDS NWQVLQPSRF LKEIPGHLLQ GDMSVNDCRK VHENLPNKTE QSVSSFGTDI KHEESKLTDN DVMNIPEDYA SEESIAAYAL
1001: NGNNFLKRFD VEVRSVVSHL FHNWAKKQAF QEPKRLIDKV RFVIGERLAI KKNKHKDVLR ALKSSLTSEE AFQYAEHVLR WEQLPADTRA HIVREKQEHF
1101: QKLRIENSMG TSEATSKQIA FLHSLGCTVV PTSRLHASRL IEQYKSL
0101: PPPRFDLDKE IINGFQTDIY ADVGSLSEAF VTPLKEPERV TLSNGCSTSS ILDDDFDDSI LEEIDLICEQ SARKAACQTP TTSIYQTPSK DNKSSDPKAS
0201: LDFRDVEKFE PDSNVKLKLD EETPTIAADP ALLNSMPDEC SKYMLSLNDR QRDAACSNIS TPLMVIAGPG SGKTSTMVGR VLVLLNEGLL PSNILAMTFT
0301: KAATSEMRER IGKSAGKKAA KDITISTFHS FSLQLCRMHA DKLQRTSEFS VYGHGQQRRA IIEAVRLYEE EKKNGSKTSV PCESGEGLNG AGAGAVCPEY
0401: AKDLSKKWQK FVTQGKASGK SPEQCRKMGN EIGAKILGNY NDILKACDAL DYHDLISCSV TLLSDFPEVF KECQDTWKAI IVDEFQDTST MQYKLLRMLG
0501: SHNHITIVGD DDQSIFGFNG ADSSGFDSFR RDFPNYKEVR LIKNYRSSRH IVEAASSIIK NNTKRCQSKS ISSENSQGSK ITVKECHNEE AQCAYVIDKI
0601: IEITNDGSTP CCSHGDIAIL YRRQVSGKVF QNAFRQRKIP FNVHGVAFYR KKVVQVILAM LKTTFSECDD ASYRRVFKAL LPFEKEEKKR IIEHIEKIST
0701: SRKCSFISAA SDIFNAKISG TFKRSQLTQG RKVLQTLDMV AKLVDREQSL SAVVTCVANM IPQKYLLEQR AVVDNDGGKL LNEDNDLRSV LQYLMDDVAE
0801: FISTHCTTTE EEDAIKEKKG CNQLHSFINY ISERETENFR SRRRDNENSV TLTTIHQSKG LEWDIVFIVK ANENEIPLLH ESNGNASESG TSLEEERRLL
0901: YVAMTRARKK LFFLYVTVDS NWQVLQPSRF LKEIPGHLLQ GDMSVNDCRK VHENLPNKTE QSVSSFGTDI KHEESKLTDN DVMNIPEDYA SEESIAAYAL
1001: NGNNFLKRFD VEVRSVVSHL FHNWAKKQAF QEPKRLIDKV RFVIGERLAI KKNKHKDVLR ALKSSLTSEE AFQYAEHVLR WEQLPADTRA HIVREKQEHF
1101: QKLRIENSMG TSEATSKQIA FLHSLGCTVV PTSRLHASRL IEQYKSL
Arabidopsis Description
SRS2ATP-dependent DNA helicase SRS2-like protein At4g25120 [Source:UniProtKB/Swiss-Prot;Acc:D1KF50]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.