Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH17636 | Soybean | nucleus | 62.34 | 64.34 |
| CDY48152 | Canola | nucleus | 10.52 | 9.1 |
| Bra018079.1-P | Field mustard | nucleus | 10.52 | 9.07 |
| CDY39560 | Canola | nucleus | 9.48 | 8.66 |
| AT3G48187.1 | Thale cress | nucleus | 9.22 | 8.39 |
| Solyc06g071490.1.1 | Tomato | nucleus | 10.78 | 7.31 |
| PGSC0003DMT400069444 | Potato | nucleus | 10.78 | 7.25 |
| KRH32403 | Soybean | nucleus | 5.84 | 6.71 |
| KRH19811 | Soybean | nucleus | 6.49 | 6.43 |
| KRH56588 | Soybean | nucleus | 5.58 | 6.02 |
| KRH34572 | Soybean | nucleus | 5.97 | 5.65 |
| KRG94143 | Soybean | nucleus | 6.36 | 5.29 |
| KRG92886 | Soybean | nucleus | 7.01 | 5.11 |
| KRH33902 | Soybean | nucleus | 6.88 | 5.07 |
| KRH07190 | Soybean | nucleus | 5.84 | 4.8 |
| KRG96822 | Soybean | nucleus | 6.49 | 4.65 |
| VIT_17s0000g08510.t01 | Wine grape | nucleus | 7.01 | 4.37 |
| KRH70385 | Soybean | nucleus | 5.71 | 4.33 |
| KRH33337 | Soybean | nucleus | 5.71 | 4.32 |
| KRG93266 | Soybean | nucleus | 5.58 | 3.92 |
| KRG92228 | Soybean | nucleus | 6.49 | 2.87 |
| TraesCS3A01G538200.1 | Wheat | nucleus | 1.56 | 0.77 |
Protein Annotations
| EMBL:ACUP02012536 | EnsemblPlants:KRG90051 | EnsemblPlantsGene:GLYMA_20G064400 | EntrezGene:100777798 | PANTHER:PTHR35491 | PANTHER:PTHR35491:SF2 |
| ProteinID:KRG90051 | ProteinID:KRG90051.1 | ProteinID:KRG90052.1 | SEG:seg | UniParc:UPI000233DC72 | UniProt:K7N1V9 |
| MapMan:35.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:-:21863528..21868093
Molecular Weight (calculated)
83558.7 Da
IEP (calculated)
8.708
GRAVY (calculated)
-0.460
Length
770 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVVLTLGRE DTNSVDETKM TEDTILTEEA PEKLEGCFDS RDRRKSKYLS YPYIGPNQKD LPAETEDLKT PCPSQKARAS SVTTNPLNGS SSYAKLGSKR
101: FRNSWYKKFI SCNTMPSHYN FMNASAEELL SGLCSTAVDC MFPVGNKSFD LVEWFFCRYR VSNYHDEAEL ATSQVNAKEE KLGKPEGNDL PDTKSKKRKT
201: NRMENAVRRK RKSLSGLSDV NVNTSNGDSQ RPGRKLKQKR KVEEVTLVHQ LQNVEINFIG VSSKYSSAPQ AAQNLCCLAS EGKSEHNQRE KIEAQEHQTA
301: QINSVYTDAK KLNCSSLVID LQFTPPAIPV DIPERNRSEN TEEIVLLASN PESRVSQEGP VGSITDHSLL VSTKAEVGTV MVNKTGLMNS MGKATGLHLN
401: TKLAVGVPLN SMGKAAAAGV HLNAKLAVGM PLNGMGKAAA GVHLNTKLAV EKKGLKNSME KPAEKPLYTN FSTGKTGLKN SMEKAAEKPL YTKVAVEIPD
501: LNGTGAECNS ISTEFDTLNF ISPELKSEQS KSLSACSRSA KTTTCNRLDD SGESLGTCVI LKFAPVAYIP SKEDLMTTFC RFGPLKASET QLLKDTGSAQ
601: VVFVRSEDAA AAFHSIEQNN KFAFGCSLVD CKLHHLSATC PPVEQLVTTA QPTGFMAIPG VMTPTRPTMS MEMPGVTPTQ PAGSIATPGV TPTQQPTGSK
701: AVPGVTPILP TGSMTMPGET PPSLHFIKQN LQMMTSILEN SGSSLSPKTR AKLDSEIKNL MRKVNSRTKV
101: FRNSWYKKFI SCNTMPSHYN FMNASAEELL SGLCSTAVDC MFPVGNKSFD LVEWFFCRYR VSNYHDEAEL ATSQVNAKEE KLGKPEGNDL PDTKSKKRKT
201: NRMENAVRRK RKSLSGLSDV NVNTSNGDSQ RPGRKLKQKR KVEEVTLVHQ LQNVEINFIG VSSKYSSAPQ AAQNLCCLAS EGKSEHNQRE KIEAQEHQTA
301: QINSVYTDAK KLNCSSLVID LQFTPPAIPV DIPERNRSEN TEEIVLLASN PESRVSQEGP VGSITDHSLL VSTKAEVGTV MVNKTGLMNS MGKATGLHLN
401: TKLAVGVPLN SMGKAAAAGV HLNAKLAVGM PLNGMGKAAA GVHLNTKLAV EKKGLKNSME KPAEKPLYTN FSTGKTGLKN SMEKAAEKPL YTKVAVEIPD
501: LNGTGAECNS ISTEFDTLNF ISPELKSEQS KSLSACSRSA KTTTCNRLDD SGESLGTCVI LKFAPVAYIP SKEDLMTTFC RFGPLKASET QLLKDTGSAQ
601: VVFVRSEDAA AAFHSIEQNN KFAFGCSLVD CKLHHLSATC PPVEQLVTTA QPTGFMAIPG VMTPTRPTMS MEMPGVTPTQ PAGSIATPGV TPTQQPTGSK
701: AVPGVTPILP TGSMTMPGET PPSLHFIKQN LQMMTSILEN SGSSLSPKTR AKLDSEIKNL MRKVNSRTKV
001: MKLQNPDKKT LREGFSQESS VVALDSGVLA MSGLKCDGKF PVKDVLMEEG GDKVRKIQVS GGNISLVVDF SGARTSSNNF FESNASCVNE NLVKGNGYRE
101: DETQEFLVGN LVWVMTKYKK WWPGEVVDFK ADAKESFMVR SIGQSHLVSW FASSKLKPFK ESFEQVLNQR NDNGFFDALQ KAMSLLSNSL KLDMTCSCIA
201: DGNGIVSAQN ITTRKNKPLI LREFSVDRLE PKEFVTQLKN IAKCVLNAGV LESTVMQSQL SAFYTLFGHK QIPMAQLHEN EGRKSFTAKM SDSKFIGSPS
301: ICAGNSRKRF RKEWFRKFVS EVDNVSARDD LVNVPPSDLI SKLKLLAVGY NCSEETENIG LFEWFFSKFR ISVYHDENAY KMQLANMAGF KDLMLATNAN
401: RGTVQKTLKS KKIGKSKMEP LNGVSVADTE QKTFELQISK KSNIESLNGV SVADTEQKTF ELQILEKSNI ESLNGVSTPN IDHEASKSNN SGKTKINHII
501: GHSNFPSSVA KVQLAKDFQD KLLVQAPDRK AMTADTLSRP AAILVPDLNS GGNALGTAEF DHMQRPETLI QHNVCPQEEK TPRSTILNFQ VTAHQGVSGT
601: QFVSSQPTSY KHFTSADLFT YSGKKKRGRK RKNAEELPIV AHASATTGIP DLNGTNTEPT LVLPQVEPTQ RRRRRKKEES PNGLTRGITI LFLKFSSQVS
701: MPSRDDLTST FSAFGPLDSS ETHVSEEFSG AQVAFVSSAD AIEAVKSLEK ANPFGETLVN FRLQQKLITV QRNIAPRMPV ISHVSPVPKP NNIPTSMDAM
801: RQNLLMMTAM LEKSGDSLSR ETKAKLKSEI TGLLEKVSSI PSSSSS
101: DETQEFLVGN LVWVMTKYKK WWPGEVVDFK ADAKESFMVR SIGQSHLVSW FASSKLKPFK ESFEQVLNQR NDNGFFDALQ KAMSLLSNSL KLDMTCSCIA
201: DGNGIVSAQN ITTRKNKPLI LREFSVDRLE PKEFVTQLKN IAKCVLNAGV LESTVMQSQL SAFYTLFGHK QIPMAQLHEN EGRKSFTAKM SDSKFIGSPS
301: ICAGNSRKRF RKEWFRKFVS EVDNVSARDD LVNVPPSDLI SKLKLLAVGY NCSEETENIG LFEWFFSKFR ISVYHDENAY KMQLANMAGF KDLMLATNAN
401: RGTVQKTLKS KKIGKSKMEP LNGVSVADTE QKTFELQISK KSNIESLNGV SVADTEQKTF ELQILEKSNI ESLNGVSTPN IDHEASKSNN SGKTKINHII
501: GHSNFPSSVA KVQLAKDFQD KLLVQAPDRK AMTADTLSRP AAILVPDLNS GGNALGTAEF DHMQRPETLI QHNVCPQEEK TPRSTILNFQ VTAHQGVSGT
601: QFVSSQPTSY KHFTSADLFT YSGKKKRGRK RKNAEELPIV AHASATTGIP DLNGTNTEPT LVLPQVEPTQ RRRRRKKEES PNGLTRGITI LFLKFSSQVS
701: MPSRDDLTST FSAFGPLDSS ETHVSEEFSG AQVAFVSSAD AIEAVKSLEK ANPFGETLVN FRLQQKLITV QRNIAPRMPV ISHVSPVPKP NNIPTSMDAM
801: RQNLLMMTAM LEKSGDSLSR ETKAKLKSEI TGLLEKVSSI PSSSSS
Arabidopsis Description
Serine/Threonine-kinase ATM [Source:UniProtKB/TrEMBL;Acc:A0A1I9LTU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.