Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH33902 | Soybean | nucleus | 66.76 | 67.46 |
| KRG96822 | Soybean | nucleus | 44.98 | 44.19 |
| PGSC0003DMT400063505 | Potato | nucleus | 11.93 | 33.51 |
| CDX99976 | Canola | nucleus | 28.31 | 31.94 |
| AT5G27650.1 | Thale cress | nucleus | 32.39 | 31.9 |
| GSMUA_Achr8P06730_001 | Banana | nucleus | 30.68 | 31.86 |
| Bra036620.1-P | Field mustard | nucleus | 30.68 | 31.46 |
| CDY19729 | Canola | nucleus | 30.3 | 31.19 |
| GSMUA_Achr3P23960_001 | Banana | nucleus | 29.45 | 30.34 |
| VIT_14s0060g02400.t01 | Wine grape | nucleus | 35.61 | 30.06 |
| Solyc01g099360.2.1 | Tomato | nucleus | 28.41 | 29.79 |
| AT3G05430.1 | Thale cress | nucleus | 26.7 | 29.22 |
| Zm00001d024841_P001 | Maize | nucleus | 22.54 | 28.0 |
| Os05t0149200-01 | Rice | plastid | 9.75 | 27.54 |
| Zm00001d010869_P001 | Maize | nucleus | 22.25 | 23.86 |
| OQU77406 | Sorghum | nucleus | 22.82 | 23.44 |
| TraesCS1B01G116700.1 | Wheat | plastid | 23.01 | 22.52 |
| HORVU1Hr1G020500.2 | Barley | nucleus, plastid | 22.92 | 22.22 |
| TraesCS1A01G089100.1 | Wheat | plastid | 22.63 | 22.03 |
| TraesCS1D01G097400.1 | Wheat | plastid | 21.69 | 21.98 |
| KRH32403 | Soybean | nucleus | 10.8 | 16.99 |
| KRH56588 | Soybean | nucleus | 11.17 | 16.53 |
| KRH19811 | Soybean | nucleus | 9.94 | 13.5 |
| KRG94143 | Soybean | nucleus | 11.46 | 13.05 |
| KRH34572 | Soybean | nucleus | 10.04 | 13.02 |
| KRH33337 | Soybean | nucleus | 12.5 | 12.95 |
| KRH70385 | Soybean | nucleus | 12.31 | 12.81 |
| KRH07190 | Soybean | nucleus | 11.17 | 12.59 |
| KRG93266 | Soybean | nucleus | 10.8 | 10.39 |
| KRG90051 | Soybean | nucleus | 5.11 | 7.01 |
| KRG92228 | Soybean | nucleus | 11.55 | 6.99 |
| KRH17636 | Soybean | nucleus | 4.92 | 6.97 |
Protein Annotations
| EMBL:ACUP02012770 | EnsemblPlants:KRG92886 | EnsemblPlantsGene:GLYMA_20G235700 | EntrezGene:100792700 | Gene3D:2.30.30.140 | InterPro:IPR000313 |
| InterPro:PWWP_dom | PANTHER:PTHR10688 | PANTHER:PTHR10688:SF1 | PFAM:PF00855 | PFscan:PS50812 | ProteinID:KRG92886 |
| ProteinID:KRG92886.1 | SEG:seg | SMART:SM00293 | SUPFAM:SSF63748 | UniParc:UPI000233DE00 | UniProt:K7N598 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:46815713..46820211
Molecular Weight (calculated)
115008.0 Da
IEP (calculated)
9.443
GRAVY (calculated)
-0.561
Length
1056 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSHHRNNHAA LTVSTGDANP DDCHQPVDAP LSAAEQIRVR VSSEDNAAPA SSTADRFDRI NNHAASSRTS ELARFSNSEV KSLLSEFDDY VAAGGASRNV
0101: GHGFEIGDMV WGKVKSHPWW PGHIYNEAFA SSAVRRTKRE GHVLVAFFGD SSYGWFEPSE LIPFDANFAE KSRQISSRNF LKAVEEAVDE ASRRCGLGLV
0201: CRCRGPGNFC PTDVEGYYSV QVPDYEPGVY SDAQIRKARS EFGAAEMLSF LKQLALNPHG GDQRSIGFTK NRSTAFAFRR AVFEQYDETY AQAFGVQPRR
0301: PSDSAGNHLD RPVRLPAKAP LSGPMVIAET LGGEKSATKS VKAKGNFKTD KYLFMRRDEP SNTSQLPSRE TSDAAGSYVL QKRPLAVSAA PEALEKHEDT
0401: GFMSQGIAAS TVKGEIAVAD QVQSDGIGHA SQEMTRSVEP VEVASKSMGR PGEMALPNIV NETSQSTNME SKTSIDVKND GDLTPSVPHE DFQQIEQGFL
0501: ATSGEVKHHK LNVDGVPKKI KVHKRPANDL KSKTSGIEGK RKKKMKNDLN LQPISGHLEK ISTSEKAVQL SGQSEKPVSI GLASREDLRS EPMQVDASTS
0601: NLMPMDSIAE VNIELPHLLG DLQALALDPF HGVKRGIPAV TRQFFLRFRS LVYQKSLPVS PPMVTENEAV EDRRPPSSIG TSDSPDDRAR ASPLIKPVKH
0701: IVRPDDPTKA GRKRALSDRQ EEISEKRLKK IKNIKALAAE KKAGSQKTSE ARQGDGKESM AQAPPKVVKP ELTRKVERPA KAVEPTILVI KFPPETSLPS
0801: VAELKARFAR FGPIDQSGLR VFWKTSTCRV VFLHKVDAQS AYKYALANQS LFGNVGMKCF LREFGDASSE VSEAAKARGD NGANESPRVK DPAVVQRQSS
0901: VSAQQPLPQP MIQLKSILKK STGDELGQGT GNGGSSKGTP RVKFMLGGEE SSRGEQLMVG NRNSFNSVSF ADGGAPSSVA MDFNTPPPTQ FKKIPQQNLH
1001: NSEMAPRNTP NFINATASAT APTVDISQQM ISLLTRCNDI VNNLTSLLGY VPYHPL
0101: GHGFEIGDMV WGKVKSHPWW PGHIYNEAFA SSAVRRTKRE GHVLVAFFGD SSYGWFEPSE LIPFDANFAE KSRQISSRNF LKAVEEAVDE ASRRCGLGLV
0201: CRCRGPGNFC PTDVEGYYSV QVPDYEPGVY SDAQIRKARS EFGAAEMLSF LKQLALNPHG GDQRSIGFTK NRSTAFAFRR AVFEQYDETY AQAFGVQPRR
0301: PSDSAGNHLD RPVRLPAKAP LSGPMVIAET LGGEKSATKS VKAKGNFKTD KYLFMRRDEP SNTSQLPSRE TSDAAGSYVL QKRPLAVSAA PEALEKHEDT
0401: GFMSQGIAAS TVKGEIAVAD QVQSDGIGHA SQEMTRSVEP VEVASKSMGR PGEMALPNIV NETSQSTNME SKTSIDVKND GDLTPSVPHE DFQQIEQGFL
0501: ATSGEVKHHK LNVDGVPKKI KVHKRPANDL KSKTSGIEGK RKKKMKNDLN LQPISGHLEK ISTSEKAVQL SGQSEKPVSI GLASREDLRS EPMQVDASTS
0601: NLMPMDSIAE VNIELPHLLG DLQALALDPF HGVKRGIPAV TRQFFLRFRS LVYQKSLPVS PPMVTENEAV EDRRPPSSIG TSDSPDDRAR ASPLIKPVKH
0701: IVRPDDPTKA GRKRALSDRQ EEISEKRLKK IKNIKALAAE KKAGSQKTSE ARQGDGKESM AQAPPKVVKP ELTRKVERPA KAVEPTILVI KFPPETSLPS
0801: VAELKARFAR FGPIDQSGLR VFWKTSTCRV VFLHKVDAQS AYKYALANQS LFGNVGMKCF LREFGDASSE VSEAAKARGD NGANESPRVK DPAVVQRQSS
0901: VSAQQPLPQP MIQLKSILKK STGDELGQGT GNGGSSKGTP RVKFMLGGEE SSRGEQLMVG NRNSFNSVSF ADGGAPSSVA MDFNTPPPTQ FKKIPQQNLH
1001: NSEMAPRNTP NFINATASAT APTVDISQQM ISLLTRCNDI VNNLTSLLGY VPYHPL
0001: MYKTKLIPVM NEDAVIVQQT DSIQDPKVTP DDTVVDSSGD VHEAIDDDVE ASSPMELDSA VTNDARVLES ERSEKDGVVG SEEEDEIKSE DVLIDKDDES
0101: SEVKEEEEEE DGSDDQSSEL GSEADEKELD LGLKEEKKGV SDYKSLLSEF DDYVASEKMG SGVSRALSYG FEVGDLVWGK VKSHPWWPGH IFNEAFASPS
0201: VRRMRRIDHV LVAFFGDSSY GWFDPAELIP FEPNLEEKSQ QTVSKHFVRA VEEAKDEASR RSALGLTCKC RNPYNFRPSN VEDYFAVDVP DYELQAVYSV
0301: DQIKNSRDKF LPAETISFVK QLALAPQECD PDSLKFMKKK AVVFAFRKSV FEEFDETYAQ AFGTKSPRSS VSTLEPHNRA PPRAPLSGPL VIAETLGDLK
0401: SSKKPTKVKV SKKKDKYLLK RRDEAGDKSV QFGEIEASSE ASHIQGIDGS LDGDFGLQRR APTLQTPMKD EKSGIVSMDF ASSNTAIPGK EFSASKPSLD
0501: EEKGLAEKSK ERMEERAAVL PEHGKSEAMA SLKPKEEAGT DLGSAGSSLQ PLLESHTSAS EGKSSTGSVI KKVKVAKRSS SEMSSENPPS EPKKKKKKKK
0601: EPDSDHPVKR KNLYSGEAGA KKLSQLGSAH LQTYMEADVP QLLSHLQDLS LDPFHGLSVA SFGTARKFFL RFRSLNYQKS LSVSSSDATV ENARDTKPSK
0701: PVKTVKRTED PSKAGKKRLS SDRQDEIPSA KKLKKTNQLK SMASEKKIIR EAKDSIKPIR EPSRVVQAKP ARGQTGKKTA PSVKVVEPTM LVMKFPPGTS
0801: LPSAALLKAR FGRFGLLDQS AIRVFWKSST CRVVFLYKAD AQTAFRYATG NNTLFGNVNV KYFLRDVDAP KAEPREPENT KEDDEPQSQW LDQAPPLHQP
0901: TLPPPNVNLK SCLKKPVDDP SSSSNNGNGN RAAVRVKFML GGEENSSKAN TEPPQVTMTL NRNSGPSSSS SSVPMEFVSK KFQNVVHHQQ LPPSTLPPIL
1001: PLPPQYTKPQ QLPIKPVDHV EPPMPPSRNF RGPIPAVSAG DISHQMLNLL SKCNEVVANV TGLLGYVPYH PL
0101: SEVKEEEEEE DGSDDQSSEL GSEADEKELD LGLKEEKKGV SDYKSLLSEF DDYVASEKMG SGVSRALSYG FEVGDLVWGK VKSHPWWPGH IFNEAFASPS
0201: VRRMRRIDHV LVAFFGDSSY GWFDPAELIP FEPNLEEKSQ QTVSKHFVRA VEEAKDEASR RSALGLTCKC RNPYNFRPSN VEDYFAVDVP DYELQAVYSV
0301: DQIKNSRDKF LPAETISFVK QLALAPQECD PDSLKFMKKK AVVFAFRKSV FEEFDETYAQ AFGTKSPRSS VSTLEPHNRA PPRAPLSGPL VIAETLGDLK
0401: SSKKPTKVKV SKKKDKYLLK RRDEAGDKSV QFGEIEASSE ASHIQGIDGS LDGDFGLQRR APTLQTPMKD EKSGIVSMDF ASSNTAIPGK EFSASKPSLD
0501: EEKGLAEKSK ERMEERAAVL PEHGKSEAMA SLKPKEEAGT DLGSAGSSLQ PLLESHTSAS EGKSSTGSVI KKVKVAKRSS SEMSSENPPS EPKKKKKKKK
0601: EPDSDHPVKR KNLYSGEAGA KKLSQLGSAH LQTYMEADVP QLLSHLQDLS LDPFHGLSVA SFGTARKFFL RFRSLNYQKS LSVSSSDATV ENARDTKPSK
0701: PVKTVKRTED PSKAGKKRLS SDRQDEIPSA KKLKKTNQLK SMASEKKIIR EAKDSIKPIR EPSRVVQAKP ARGQTGKKTA PSVKVVEPTM LVMKFPPGTS
0801: LPSAALLKAR FGRFGLLDQS AIRVFWKSST CRVVFLYKAD AQTAFRYATG NNTLFGNVNV KYFLRDVDAP KAEPREPENT KEDDEPQSQW LDQAPPLHQP
0901: TLPPPNVNLK SCLKKPVDDP SSSSNNGNGN RAAVRVKFML GGEENSSKAN TEPPQVTMTL NRNSGPSSSS SSVPMEFVSK KFQNVVHHQQ LPPSTLPPIL
1001: PLPPQYTKPQ QLPIKPVDHV EPPMPPSRNF RGPIPAVSAG DISHQMLNLL SKCNEVVANV TGLLGYVPYH PL
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K4D6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.