Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010869_P001 | Maize | nucleus | 68.82 | 59.39 |
| OQU77406 | Sorghum | nucleus | 65.88 | 54.47 |
| TraesCS1B01G116700.1 | Wheat | plastid | 53.53 | 42.17 |
| TraesCS1A01G089100.1 | Wheat | plastid | 53.06 | 41.57 |
| TraesCS1D01G097400.1 | Wheat | plastid | 48.94 | 39.92 |
| HORVU1Hr1G020500.2 | Barley | nucleus, plastid | 50.71 | 39.58 |
| Os05t0149200-01 | Rice | plastid | 16.82 | 38.24 |
| GSMUA_Achr8P06730_001 | Banana | nucleus | 31.88 | 26.65 |
| GSMUA_Achr3P23960_001 | Banana | nucleus | 30.82 | 25.56 |
| PGSC0003DMT400063505 | Potato | nucleus | 11.18 | 25.27 |
| KRH33902 | Soybean | nucleus | 28.82 | 23.45 |
| Solyc01g099360.2.1 | Tomato | nucleus | 26.82 | 22.64 |
| CDX99976 | Canola | nucleus | 24.82 | 22.54 |
| KRG92886 | Soybean | nucleus | 28.0 | 22.54 |
| AT5G27650.1 | Thale cress | nucleus | 28.0 | 22.2 |
| KRG96822 | Soybean | nucleus | 27.88 | 22.05 |
| CDY19729 | Canola | nucleus | 26.24 | 21.73 |
| Bra036620.1-P | Field mustard | nucleus | 26.0 | 21.46 |
| AT3G05430.1 | Thale cress | nucleus | 24.0 | 21.14 |
| VIT_14s0060g02400.t01 | Wine grape | nucleus | 28.71 | 19.5 |
| Zm00001d010984_P001 | Maize | plastid | 10.35 | 17.22 |
| Zm00001d011770_P001 | Maize | nucleus | 12.35 | 11.81 |
| Zm00001d041940_P001 | Maize | nucleus | 11.18 | 11.22 |
| Zm00001d038396_P003 | Maize | nucleus | 13.41 | 8.44 |
| Zm00001d010556_P002 | Maize | nucleus | 13.76 | 6.3 |
Protein Annotations
| EnsemblPlants:Zm00001d024841_P001 | EnsemblPlants:Zm00001d024841_T001 | EnsemblPlantsGene:Zm00001d024841 | Gene3D:2.30.30.140 | InterPro:IPR000313 | InterPro:PWWP_dom |
| ncoils:Coil | PANTHER:PTHR10688 | PANTHER:PTHR10688:SF1 | PFAM:PF00855 | PFscan:PS50812 | ProteinID:AQK42168.1 |
| SEG:seg | SMART:SM00293 | SUPFAM:SSF63748 | UniParc:UPI000842E07D | UniProt:A0A1D6J298 | MapMan:35.2 |
Description
Tudor/PWWP/MBT superfamily protein
Coordinates
chr10:+:90403804..90415670
Molecular Weight (calculated)
91848.5 Da
IEP (calculated)
10.413
GRAVY (calculated)
-0.566
Length
850 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDPAAGGAM VPAAGRGIAW ANGGPRFGDM VWAKVKSHPW WPGHIYSVSL TDDEEVHRGH RDGLVLVAFF GDSSYGWFDP SELVPFEDHF TEKAAQGGSS
101: RSSFAAAVAE AVDEVARRSA LALLCPCDIP DAFRPHPSDG NFFLVDVPAF DTDADYQLDQ IRAARQRFVP RKALNYLLDA AVTQRDAAEK AARTVPGMEM
201: AALFLAYRRA VFSPIDNTYA QAFGVDPELA LAAEQKAAAE RAQRARPLKG GLRKTPEHAT PPAGRRRGAR LMEKIVPGAS AMKAKSSKKD QYLLKRRDAP
301: AHRQRQLPDD GPPGFPSSGD PPTPPLPGSS VADEDFMLQR RAPLVEVPPA ALAQPTEMPA APKPRKRQPE EGADASPDAA GGDPKRNKKK KKLSDVDGAG
401: AGKASVVQDP IWLDLTQVLS DLRNLPLVPF HGADRRISDT TRSFVLAFRS KYYKKSYEND PPEESKKGLG KPSAAAADGH WPKKKKPAPR PGAGKGNDPT
501: IAGVKRGPSD RQGDLAVRKK AKLDKIKTLP SEKKAAGLEQ KDTAVAAVAK DKAEVAAAKR KEPAPAPAPA PSVRTLSPTA LQMKFPLKST LPSVALLKAR
601: FARFGPLDVD GIRVYWKSHM CRVVYRFKSD AEAAFRYAQA NAMFGQVDTQ YHLREVEAPE APPQQRSELR LMETAPFRPG SSGNGAPLPM SRAGAVPAAA
701: ARPPVGQLPK SILKKSTDEG NSGTAREVSR VTFMLDGGAP MVVKAAKSVG FASSQPPPRP LLQQPMRPNQ PRPSGFPGGQ QQVGYPPRSG DSPPQQFPPR
801: PSGGAEIPAW KMGEREFKEE VWRLMTGIAK LVEPLTDKNG FFPYHLFRAQ
101: RSSFAAAVAE AVDEVARRSA LALLCPCDIP DAFRPHPSDG NFFLVDVPAF DTDADYQLDQ IRAARQRFVP RKALNYLLDA AVTQRDAAEK AARTVPGMEM
201: AALFLAYRRA VFSPIDNTYA QAFGVDPELA LAAEQKAAAE RAQRARPLKG GLRKTPEHAT PPAGRRRGAR LMEKIVPGAS AMKAKSSKKD QYLLKRRDAP
301: AHRQRQLPDD GPPGFPSSGD PPTPPLPGSS VADEDFMLQR RAPLVEVPPA ALAQPTEMPA APKPRKRQPE EGADASPDAA GGDPKRNKKK KKLSDVDGAG
401: AGKASVVQDP IWLDLTQVLS DLRNLPLVPF HGADRRISDT TRSFVLAFRS KYYKKSYEND PPEESKKGLG KPSAAAADGH WPKKKKPAPR PGAGKGNDPT
501: IAGVKRGPSD RQGDLAVRKK AKLDKIKTLP SEKKAAGLEQ KDTAVAAVAK DKAEVAAAKR KEPAPAPAPA PSVRTLSPTA LQMKFPLKST LPSVALLKAR
601: FARFGPLDVD GIRVYWKSHM CRVVYRFKSD AEAAFRYAQA NAMFGQVDTQ YHLREVEAPE APPQQRSELR LMETAPFRPG SSGNGAPLPM SRAGAVPAAA
701: ARPPVGQLPK SILKKSTDEG NSGTAREVSR VTFMLDGGAP MVVKAAKSVG FASSQPPPRP LLQQPMRPNQ PRPSGFPGGQ QQVGYPPRSG DSPPQQFPPR
801: PSGGAEIPAW KMGEREFKEE VWRLMTGIAK LVEPLTDKNG FFPYHLFRAQ
0001: MYKTKLIPVM NEDAVIVQQT DSIQDPKVTP DDTVVDSSGD VHEAIDDDVE ASSPMELDSA VTNDARVLES ERSEKDGVVG SEEEDEIKSE DVLIDKDDES
0101: SEVKEEEEEE DGSDDQSSEL GSEADEKELD LGLKEEKKGV SDYKSLLSEF DDYVASEKMG SGVSRALSYG FEVGDLVWGK VKSHPWWPGH IFNEAFASPS
0201: VRRMRRIDHV LVAFFGDSSY GWFDPAELIP FEPNLEEKSQ QTVSKHFVRA VEEAKDEASR RSALGLTCKC RNPYNFRPSN VEDYFAVDVP DYELQAVYSV
0301: DQIKNSRDKF LPAETISFVK QLALAPQECD PDSLKFMKKK AVVFAFRKSV FEEFDETYAQ AFGTKSPRSS VSTLEPHNRA PPRAPLSGPL VIAETLGDLK
0401: SSKKPTKVKV SKKKDKYLLK RRDEAGDKSV QFGEIEASSE ASHIQGIDGS LDGDFGLQRR APTLQTPMKD EKSGIVSMDF ASSNTAIPGK EFSASKPSLD
0501: EEKGLAEKSK ERMEERAAVL PEHGKSEAMA SLKPKEEAGT DLGSAGSSLQ PLLESHTSAS EGKSSTGSVI KKVKVAKRSS SEMSSENPPS EPKKKKKKKK
0601: EPDSDHPVKR KNLYSGEAGA KKLSQLGSAH LQTYMEADVP QLLSHLQDLS LDPFHGLSVA SFGTARKFFL RFRSLNYQKS LSVSSSDATV ENARDTKPSK
0701: PVKTVKRTED PSKAGKKRLS SDRQDEIPSA KKLKKTNQLK SMASEKKIIR EAKDSIKPIR EPSRVVQAKP ARGQTGKKTA PSVKVVEPTM LVMKFPPGTS
0801: LPSAALLKAR FGRFGLLDQS AIRVFWKSST CRVVFLYKAD AQTAFRYATG NNTLFGNVNV KYFLRDVDAP KAEPREPENT KEDDEPQSQW LDQAPPLHQP
0901: TLPPPNVNLK SCLKKPVDDP SSSSNNGNGN RAAVRVKFML GGEENSSKAN TEPPQVTMTL NRNSGPSSSS SSVPMEFVSK KFQNVVHHQQ LPPSTLPPIL
1001: PLPPQYTKPQ QLPIKPVDHV EPPMPPSRNF RGPIPAVSAG DISHQMLNLL SKCNEVVANV TGLLGYVPYH PL
0101: SEVKEEEEEE DGSDDQSSEL GSEADEKELD LGLKEEKKGV SDYKSLLSEF DDYVASEKMG SGVSRALSYG FEVGDLVWGK VKSHPWWPGH IFNEAFASPS
0201: VRRMRRIDHV LVAFFGDSSY GWFDPAELIP FEPNLEEKSQ QTVSKHFVRA VEEAKDEASR RSALGLTCKC RNPYNFRPSN VEDYFAVDVP DYELQAVYSV
0301: DQIKNSRDKF LPAETISFVK QLALAPQECD PDSLKFMKKK AVVFAFRKSV FEEFDETYAQ AFGTKSPRSS VSTLEPHNRA PPRAPLSGPL VIAETLGDLK
0401: SSKKPTKVKV SKKKDKYLLK RRDEAGDKSV QFGEIEASSE ASHIQGIDGS LDGDFGLQRR APTLQTPMKD EKSGIVSMDF ASSNTAIPGK EFSASKPSLD
0501: EEKGLAEKSK ERMEERAAVL PEHGKSEAMA SLKPKEEAGT DLGSAGSSLQ PLLESHTSAS EGKSSTGSVI KKVKVAKRSS SEMSSENPPS EPKKKKKKKK
0601: EPDSDHPVKR KNLYSGEAGA KKLSQLGSAH LQTYMEADVP QLLSHLQDLS LDPFHGLSVA SFGTARKFFL RFRSLNYQKS LSVSSSDATV ENARDTKPSK
0701: PVKTVKRTED PSKAGKKRLS SDRQDEIPSA KKLKKTNQLK SMASEKKIIR EAKDSIKPIR EPSRVVQAKP ARGQTGKKTA PSVKVVEPTM LVMKFPPGTS
0801: LPSAALLKAR FGRFGLLDQS AIRVFWKSST CRVVFLYKAD AQTAFRYATG NNTLFGNVNV KYFLRDVDAP KAEPREPENT KEDDEPQSQW LDQAPPLHQP
0901: TLPPPNVNLK SCLKKPVDDP SSSSNNGNGN RAAVRVKFML GGEENSSKAN TEPPQVTMTL NRNSGPSSSS SSVPMEFVSK KFQNVVHHQQ LPPSTLPPIL
1001: PLPPQYTKPQ QLPIKPVDHV EPPMPPSRNF RGPIPAVSAG DISHQMLNLL SKCNEVVANV TGLLGYVPYH PL
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K4D6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.