Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d011770_P001 | Maize | nucleus | 67.77 | 64.57 |
| KXG34235 | Sorghum | nucleus | 63.64 | 60.36 |
| HORVU3Hr1G117740.2 | Barley | nucleus | 8.97 | 39.58 |
| Zm00001d010984_P001 | Maize | plastid | 17.83 | 29.55 |
| CDY04873 | Canola | nucleus | 14.29 | 26.3 |
| Os11t0303500-01 | Rice | nucleus | 22.43 | 26.24 |
| Bra028857.1-P | Field mustard | nucleus | 14.17 | 26.09 |
| CDY55692 | Canola | nucleus | 13.81 | 25.83 |
| AT5G02950.2 | Thale cress | nucleus | 17.71 | 23.73 |
| KRH32403 | Soybean | nucleus | 17.59 | 22.21 |
| GSMUA_Achr9P04320_001 | Banana | nucleus | 18.89 | 20.94 |
| GSMUA_Achr10P... | Banana | nucleus | 17.12 | 20.45 |
| PGSC0003DMT400087303 | Potato | nucleus | 18.42 | 20.23 |
| KRH19811 | Soybean | nucleus | 17.83 | 19.41 |
| CDY07935 | Canola | nucleus | 12.4 | 18.58 |
| CDX73990 | Canola | nucleus | 12.4 | 18.13 |
| VIT_08s0040g02440.t01 | Wine grape | nucleus | 18.18 | 17.34 |
| KRH34572 | Soybean | nucleus | 15.58 | 16.22 |
| Solyc04g049950.1.1 | Tomato | nucleus | 8.5 | 15.89 |
| GSMUA_Achr11P... | Banana | nucleus | 13.7 | 15.89 |
| KRH70385 | Soybean | nucleus | 18.42 | 15.37 |
| AT3G09670.1 | Thale cress | nucleus | 12.99 | 15.15 |
| KRH33337 | Soybean | nucleus | 18.06 | 15.01 |
| Bra001301.1-P | Field mustard | nucleus | 5.67 | 14.2 |
| Zm00001d038396_P003 | Maize | nucleus | 18.89 | 11.85 |
| Zm00001d024841_P001 | Maize | nucleus | 11.22 | 11.18 |
| Zm00001d010869_P001 | Maize | nucleus | 11.69 | 10.05 |
| PGSC0003DMT400027409 | Potato | nucleus | 17.95 | 9.18 |
| VIT_13s0019g03620.t01 | Wine grape | nucleus | 19.72 | 8.9 |
| KRG92228 | Soybean | nucleus | 16.65 | 8.08 |
| Zm00001d010556_P002 | Maize | nucleus | 17.59 | 8.03 |
| Solyc09g007340.2.1 | Tomato | cytosol | 17.83 | 7.13 |
| TraesCS3B01G603700.1 | Wheat | nucleus | 1.42 | 6.22 |
Protein Annotations
| EnsemblPlants:Zm00001d041940_P001 | EnsemblPlants:Zm00001d041940_T001 | EnsemblPlantsGene:Zm00001d041940 | Gene3D:2.30.30.140 | InterPro:IPR000313 | InterPro:PWWP_dom |
| ncoils:Coil | PANTHER:PTHR35491 | PANTHER:PTHR35491:SF3 | PFAM:PF00855 | PFscan:PS50812 | ProteinID:ONM34124.1 |
| SEG:seg | SMART:SM00293 | SUPFAM:SSF63748 | UniParc:UPI0002211D23 | UniProt:A0A096RLJ2 | MapMan:35.2 |
Description
Tudor/PWWP/MBT superfamily protein
Coordinates
chr3:+:144566028..144568571
Molecular Weight (calculated)
92678.6 Da
IEP (calculated)
10.398
GRAVY (calculated)
-0.770
Length
847 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSRGTTPK SGDNDNTSTR PARLRVMRPE VKEFLTSPRR RRPKKQPPPP PPPPPRNVKL KERKNKEKGK AATEEDKFER AQYNCPFQDE GEGGRDFAPP
101: ELVWGKVRSH SWWPGQVFDA ADASEIALQH RKAGALLIVY FWDRTFAWSS PSALLPFRSN FTRLSAQSTM SSFVSAMDSA LQEVGRRVEA GLSCGCFTSS
201: IATKQEVQNS GIRQGAYGAA VDSVYTRDAF HSKTFLDYIS ALGKKPLAGA DLLVLATVKA QLRALNRSRG SRDLPEFEMF EGTDEITEMT HTDGDDTLSR
301: GKKSKRMKSS SKKKTDISKH LDGLKTGSVA DSRTLAKKAV GDALSERKSG RTLRSTSKKE DALEGLKRLA KDGIQELTGK SKDAPILKEK NQGHGAGSAH
401: KKGRITEDGY HRLGDSNAKD PIFPGKRRLG HNENSISKRV PISEHGRKKK KLSELMAETG KPNSASSGKS KTRGKRSLHD SAEKTEDPEH HSKDTLMTRK
501: RKKLNTLGDL SSLSEPLSRK KSTKVGELMS KVAGSSMLQA APAVKANSAV SQTKPRRAKY RQVNAADKSP CPVKVNQGNS EAVSKESLSC GEMLWQLSVA
601: ACGLQQREKI VPTSVNFFTG FRKNKFSSSD VNEGMPEKAA NTESTLSEQP IADHMQDDYW ADILINVEEP LSNLKKKIDE SKKRVNKKAP QVKKPPVNSL
701: STVENVDEPR SEGNQDTGNE EQLRNETKLF SANGSQLNAG TKFGQEMENC FLSGLVLHFS RPCAVPSQCD LIKIFSQYGP VNEVKADVAN SASSAQVIFK
801: RRMDAEAAFA GAGKISALGP ALVSFRLTDF PASASGNKAS HVASKSE
101: ELVWGKVRSH SWWPGQVFDA ADASEIALQH RKAGALLIVY FWDRTFAWSS PSALLPFRSN FTRLSAQSTM SSFVSAMDSA LQEVGRRVEA GLSCGCFTSS
201: IATKQEVQNS GIRQGAYGAA VDSVYTRDAF HSKTFLDYIS ALGKKPLAGA DLLVLATVKA QLRALNRSRG SRDLPEFEMF EGTDEITEMT HTDGDDTLSR
301: GKKSKRMKSS SKKKTDISKH LDGLKTGSVA DSRTLAKKAV GDALSERKSG RTLRSTSKKE DALEGLKRLA KDGIQELTGK SKDAPILKEK NQGHGAGSAH
401: KKGRITEDGY HRLGDSNAKD PIFPGKRRLG HNENSISKRV PISEHGRKKK KLSELMAETG KPNSASSGKS KTRGKRSLHD SAEKTEDPEH HSKDTLMTRK
501: RKKLNTLGDL SSLSEPLSRK KSTKVGELMS KVAGSSMLQA APAVKANSAV SQTKPRRAKY RQVNAADKSP CPVKVNQGNS EAVSKESLSC GEMLWQLSVA
601: ACGLQQREKI VPTSVNFFTG FRKNKFSSSD VNEGMPEKAA NTESTLSEQP IADHMQDDYW ADILINVEEP LSNLKKKIDE SKKRVNKKAP QVKKPPVNSL
701: STVENVDEPR SEGNQDTGNE EQLRNETKLF SANGSQLNAG TKFGQEMENC FLSGLVLHFS RPCAVPSQCD LIKIFSQYGP VNEVKADVAN SASSAQVIFK
801: RRMDAEAAFA GAGKISALGP ALVSFRLTDF PASASGNKAS HVASKSE
001: MSTESERIES VSEANASSLE VGNDQMSEAL AGQAQELKTI GDDKEGCGNF ASAGDNGMEK VNGFTNLVKE TESVNGELDL GTRTENVGGE SNQSDKKVLV
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF36]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.