Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d041940_P001 | Maize | nucleus | 60.36 | 63.64 |
| Zm00001d011770_P001 | Maize | nucleus | 62.6 | 62.88 |
| HORVU3Hr1G117740.2 | Barley | nucleus | 8.62 | 40.1 |
| EES18937 | Sorghum | nucleus, plastid | 18.48 | 32.61 |
| Os11t0303500-01 | Rice | nucleus | 23.96 | 29.56 |
| CDY55692 | Canola | nucleus | 13.44 | 26.49 |
| CDY04873 | Canola | nucleus | 13.33 | 25.87 |
| Bra028857.1-P | Field mustard | nucleus | 13.21 | 25.65 |
| AT5G02950.2 | Thale cress | nucleus | 16.8 | 23.73 |
| KRH32403 | Soybean | nucleus | 17.69 | 23.55 |
| GSMUA_Achr9P04320_001 | Banana | nucleus | 18.14 | 21.2 |
| GSMUA_Achr10P... | Banana | nucleus | 16.24 | 20.45 |
| PGSC0003DMT400087303 | Potato | nucleus | 16.69 | 19.33 |
| KRH19811 | Soybean | nucleus | 16.69 | 19.15 |
| CDY07935 | Canola | nucleus | 11.87 | 18.76 |
| VIT_08s0040g02440.t01 | Wine grape | nucleus | 17.81 | 17.91 |
| Solyc04g049950.1.1 | Tomato | nucleus | 8.96 | 17.66 |
| CDX73990 | Canola | nucleus | 11.31 | 17.44 |
| KRH34572 | Soybean | nucleus | 15.57 | 17.08 |
| KRH33337 | Soybean | nucleus | 18.81 | 16.49 |
| GSMUA_Achr11P... | Banana | nucleus | 13.33 | 16.3 |
| AT3G09670.1 | Thale cress | nucleus | 12.99 | 15.98 |
| KRH70385 | Soybean | nucleus | 17.69 | 15.57 |
| Bra001301.1-P | Field mustard | nucleus | 4.82 | 12.72 |
| OQU78150 | Sorghum | nucleus | 17.36 | 11.19 |
| PGSC0003DMT400027409 | Potato | nucleus | 18.14 | 9.78 |
| VIT_13s0019g03620.t01 | Wine grape | nucleus | 20.04 | 9.54 |
| KRG92228 | Soybean | nucleus | 17.92 | 9.17 |
| OQU77406 | Sorghum | nucleus | 9.85 | 8.56 |
| TraesCS3B01G603700.1 | Wheat | nucleus | 1.57 | 7.25 |
| Solyc09g007340.2.1 | Tomato | cytosol | 16.35 | 6.89 |
Protein Annotations
| EnsemblPlants:KXG34235 | EnsemblPlantsGene:SORBI_3003G446100 | Gene3D:2.30.30.140 | InterPro:IPR000313 | InterPro:PWWP_dom | ncoils:Coil |
| PANTHER:PTHR35491 | PANTHER:PTHR35491:SF3 | PFAM:PF00855 | PFscan:PS50812 | ProteinID:KXG34234.1 | ProteinID:KXG34235 |
| ProteinID:KXG34235.1 | ProteinID:OQU88280.1 | SEG:seg | SMART:SM00293 | SUPFAM:SSF63748 | UniParc:UPI0001C80A01 |
| UniProt:A0A1B6Q8I6 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:74380851..74384257
Molecular Weight (calculated)
98057.8 Da
IEP (calculated)
10.263
GRAVY (calculated)
-0.927
Length
893 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSRGTASR PARLRVMRPE VKEFLTSPRR SRPKKQPPPP PPPPPPPPPR REKVKERKQK EKEKAATGEE KFERAQYNCA FQDEDEGGRD FAPPELVWGK
101: VRSHPWWPGQ VFDAADASEI ALQHRKAGAP LVAYFWDRTF AWSDPSALLP FRTNFRRLSA QSNMSSFVSA IDSALQEVGR RVEAGLSCGC FSSSIATKQE
201: VQNSGVRQGA YGAVVDSVYT RDAFHGKTFL DYISALGKKP LAGADLLDLA TAKAQVRAFN RSRGSRDLPE FVMFEGIEEI TELTHTKGER MHKRSEDDVP
301: SKEKKSRRYG SSRRKGEALP EAGNEDAMDE DGNGGAADDT LSQGKKSKRM KSSLKKKTDI SKHLDGLKTS PVADSRTLDK KTVDDVLSER KSGRTLRSMS
401: KKEDALEGLK RLAKDGNEEL TGKSKDASVL KENNQRYGAG SAHKRGRITE DGYHRLGDSN AEDLTSDKRR SGHNENSISK RVSISEHGRK KKKLSELMAG
501: TGRPNSASGG KTRGKRLLHD SVEKAEDPDH HSKDTLVTRK RKKLNTLGDL SSQSEPLSRK KSTKVGELMS KAAGNSIQAA PAVGANSAVS QTKPRRAKHR
601: QVNSEDKSPR PVKVNQGNSE AISEESLSCG EMLWQLSVAA CGLKQREKIA PTSVNFFTDF RKNSNFSSSD VNEGMSEKVT NTEPTPSEQP IADHMQDDYW
701: ADILINVEEP LSSLKKKKDE SKKRANKKEP QVKKPPVHSS VTTENVDEPR SEGNQDTENG EKLRNETKPF SANGSKPNAG TKSGEEMENS FLSGLVLHFS
801: RPSAVPSRSD LIKIFSQYGP VNEAKADVAN SASSAQVIFK RRMDAEAAFA GAGKISALGP ALVSFRLTDF PASASGNKAS HVASKSDRVL HDQ
101: VRSHPWWPGQ VFDAADASEI ALQHRKAGAP LVAYFWDRTF AWSDPSALLP FRTNFRRLSA QSNMSSFVSA IDSALQEVGR RVEAGLSCGC FSSSIATKQE
201: VQNSGVRQGA YGAVVDSVYT RDAFHGKTFL DYISALGKKP LAGADLLDLA TAKAQVRAFN RSRGSRDLPE FVMFEGIEEI TELTHTKGER MHKRSEDDVP
301: SKEKKSRRYG SSRRKGEALP EAGNEDAMDE DGNGGAADDT LSQGKKSKRM KSSLKKKTDI SKHLDGLKTS PVADSRTLDK KTVDDVLSER KSGRTLRSMS
401: KKEDALEGLK RLAKDGNEEL TGKSKDASVL KENNQRYGAG SAHKRGRITE DGYHRLGDSN AEDLTSDKRR SGHNENSISK RVSISEHGRK KKKLSELMAG
501: TGRPNSASGG KTRGKRLLHD SVEKAEDPDH HSKDTLVTRK RKKLNTLGDL SSQSEPLSRK KSTKVGELMS KAAGNSIQAA PAVGANSAVS QTKPRRAKHR
601: QVNSEDKSPR PVKVNQGNSE AISEESLSCG EMLWQLSVAA CGLKQREKIA PTSVNFFTDF RKNSNFSSSD VNEGMSEKVT NTEPTPSEQP IADHMQDDYW
701: ADILINVEEP LSSLKKKKDE SKKRANKKEP QVKKPPVHSS VTTENVDEPR SEGNQDTENG EKLRNETKPF SANGSKPNAG TKSGEEMENS FLSGLVLHFS
801: RPSAVPSRSD LIKIFSQYGP VNEAKADVAN SASSAQVIFK RRMDAEAAFA GAGKISALGP ALVSFRLTDF PASASGNKAS HVASKSDRVL HDQ
001: MSTESERIES VSEANASSLE VGNDQMSEAL AGQAQELKTI GDDKEGCGNF ASAGDNGMEK VNGFTNLVKE TESVNGELDL GTRTENVGGE SNQSDKKVLV
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF36]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.