Factsheet for GSMUA_Achr11P24640_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P04320_001	Banana	nucleus	27.53	26.31
CDY55692	Canola	nucleus	14.25	22.96
Bra028857.1-P	Field mustard	nucleus	14.11	22.39
CDY04873	Canola	nucleus	14.11	22.39
CDX73990	Canola	nucleus	16.99	21.42
Os05t0122500-00	Rice	nucleus	15.07	20.87
GSMUA_Achr10P...	Banana	nucleus	19.86	20.45
CDY07935	Canola	nucleus	15.34	19.82
KRH32403	Soybean	nucleus	17.4	18.93
AT5G02950.2	Thale cress	nucleus	15.75	18.2
EES18937	Sorghum	nucleus, plastid	12.33	17.79
GSMUA_Achr8P02720_001	Banana	nucleus	19.86	17.24
Zm00001d010984_P001	Maize	plastid	11.78	16.83
TraesCS1A01G059600.1	Wheat	cytosol	12.6	16.82
KRH19811	Soybean	nucleus	17.67	16.58
PGSC0003DMT400087303	Potato	nucleus	17.26	16.34
TraesCS1D01G060800.1	Wheat	cytosol	12.19	16.3
TraesCS1D01G060900.1	Wheat	nucleus	12.05	16.18
TraesCS1B01G077800.1	Wheat	cytosol	12.05	15.97
TraesCS1B01G077900.1	Wheat	nucleus	12.05	15.8
AT3G09670.1	Thale cress	nucleus	15.62	15.7
VIT_08s0040g02440.t01	Wine grape	nucleus	18.63	15.32
Bra001301.1-P	Field mustard	nucleus	6.99	15.09
KRH70385	Soybean	nucleus	19.86	14.29
TraesCS1A01G059700.1	Wheat	cytosol	7.26	14.25
KRH34572	Soybean	nucleus	15.48	13.88
Zm00001d041940_P001	Maize	nucleus	15.89	13.7
Zm00001d011770_P001	Maize	nucleus	16.44	13.5
KRH33337	Soybean	nucleus	18.77	13.44
KXG34235	Sorghum	nucleus	16.3	13.33
HORVU1Hr1G012310.1	Barley	cytosol, nucleus	6.85	13.19
HORVU3Hr1G117740.2	Barley	nucleus	3.29	12.5
HORVU1Hr1G012320.1	Barley	cytosol, nucleus	6.3	12.23
Solyc04g049950.1.1	Tomato	nucleus	6.3	10.15
GSMUA_Achr5P29300_001	Banana	nucleus	21.37	9.86
GSMUA_Achr8P06730_001	Banana	nucleus	12.33	8.85
Os11t0303500-01	Rice	nucleus	8.36	8.43
GSMUA_Achr3P23960_001	Banana	nucleus	11.37	8.1
PGSC0003DMT400027409	Potato	nucleus	18.36	8.09
VIT_13s0019g03620.t01	Wine grape	nucleus	19.18	7.46
TraesCS3B01G603700.1	Wheat	nucleus	1.78	6.74
HORVU3Hr1G117730.2	Barley	nucleus, plastid	16.03	6.66
TraesCS3B01G603600.1	Wheat	nucleus	13.7	6.59
KRG92228	Soybean	nucleus	15.21	6.36
Solyc09g007340.2.1	Tomato	cytosol	17.81	6.13
TraesCS3D01G543800.1	Wheat	nucleus	10.82	5.16

Protein Annotations

EnsemblPlants:GSMUA_Achr11P24640_001	EnsemblPlants:GSMUA_Achr11T24640_001	EnsemblPlantsGene:GSMUA_Achr11G24640_001	Gene3D:2.30.30.140	InterPro:IPR000313	InterPro:PWWP_dom
PANTHER:PTHR42851	PANTHER:PTHR42851:SF4	PFAM:PF00855	PFscan:PS50812	SEG:seg	SMART:SM00293
SUPFAM:SSF63748	UniParc:UPI0002956D5F	UniProt:M0RV44	MapMan:35.2	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G24640_001]

Coordinates

chr11:-:24082316..24085457

Molecular Weight (calculated)

78600.8 Da

IEP (calculated)

5.306

GRAVY (calculated)

-0.559

Length

730 amino acids

Sequence
(BLAST)

001: MDSNPSEGEA GRGSLDLNCV AIASEQTETL TDAVDLGSDA LRVECVSDGG AMEDAAVVGD ADVIGQQLNA VDADRGESIE VVGGGLIDAG SVKVVTEAGT
101: PGGETNIVDK KGAEGKGDGA MADVDEVKVD VEAGIRHADA VVADVKLVDN IVVTDVGMEM SSPGDEDVKV GEEEMAASKK RGRPQKSIDK GDAISPVVDL
201: NVSAVTGSCG DQDVPLSDQK SKARRKRGRP RPSIVELIEH AGCLFPFQDE KKAAFAGSDL VWGKVRSHPW CPGQIFYPCD ASKMASNIQK KDHHLVAFFG
301: DKTFAWCDES RLKHFGTYFS QLENQSSSNA FVTAVSAALQ EVSRRVEMGM TCHCFMDEIY ASLEDQKIEN AGIQEGTCGS TVDRCCIATS FEPLRLVDYI
401: QTLAQFPHGG VDKLEFVVVK SQLKAFYHSM GYAELPVFVL VEELENDIEG SPSMERISGE DIGDPSTPTS SDAVSGKRKS RVRGSSHGKE KHIFEHGRKK
501: KSLSELLEKN NDHHDVDKNT RYGGNASSHK NDKGANFDPA DSGKGKKKKL DALVGLGTKS QTSRHGKQLK VGECMHQVAG QMTGSPPMLK SNGNALTKSS
601: TKASGRKDDF GDASKQKKTR RGIKSRGTRK STDIKSASLE TVSDHVQESH WSDVVVTEGE EPVDELAPHL ALNSISEEGQ HLQDDSANPN YMHIADSEKP
701: NGQILDGTNP NNQLRAHFHL DRYMNIAVFP

Best Arabidopsis Sequence Match ( AT3G09670.1 )
(BLAST)

001: MSTESERIES VSEANASSLE VGNDQMSEAL AGQAQELKTI GDDKEGCGNF ASAGDNGMEK VNGFTNLVKE TESVNGELDL GTRTENVGGE SNQSDKKVLV
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE

Arabidopsis Description

Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF36]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.