Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400087303 | Potato | nucleus | 27.94 | 76.78 |
| CDY55692 | Canola | nucleus | 7.5 | 35.1 |
| Bra028857.1-P | Field mustard | nucleus | 7.46 | 34.35 |
| CDY04873 | Canola | nucleus | 7.46 | 34.35 |
| KRH32403 | Soybean | nucleus | 10.05 | 31.74 |
| AT5G02950.2 | Thale cress | nucleus | 8.68 | 29.11 |
| HORVU3Hr1G117740.2 | Barley | nucleus | 2.6 | 28.65 |
| KRH19811 | Soybean | nucleus | 10.1 | 27.51 |
| VIT_08s0040g02440.t01 | Wine grape | nucleus | 10.62 | 25.34 |
| Os05t0122500-00 | Rice | nucleus | 5.76 | 23.15 |
| CDX73990 | Canola | nucleus | 6.32 | 23.14 |
| TraesCS1A01G059700.1 | Wheat | cytosol | 4.01 | 22.85 |
| TraesCS1D01G060900.1 | Wheat | nucleus | 5.8 | 22.61 |
| TraesCS1D01G060800.1 | Wheat | cytosol | 5.76 | 22.34 |
| TraesCS1B01G077800.1 | Wheat | cytosol | 5.8 | 22.32 |
| TraesCS1A01G059600.1 | Wheat | cytosol | 5.66 | 21.94 |
| HORVU1Hr1G071710.17 | Barley | endoplasmic reticulum | 5.66 | 21.78 |
| CDY07935 | Canola | nucleus | 5.8 | 21.77 |
| HORVU1Hr1G012310.1 | Barley | cytosol, nucleus | 3.82 | 21.37 |
| EES18937 | Sorghum | nucleus, plastid | 5.05 | 21.15 |
| Zm00001d010984_P001 | Maize | plastid | 5.1 | 21.14 |
| Os05t0463500-01 | Rice | nucleus | 4.53 | 20.91 |
| TraesCS1B01G077900.1 | Wheat | nucleus | 5.43 | 20.65 |
| GSMUA_Achr10P... | Banana | nucleus | 6.8 | 20.31 |
| Solyc04g049950.1.1 | Tomato | nucleus | 4.34 | 20.31 |
| AT3G09670.1 | Thale cress | nucleus | 6.94 | 20.25 |
| GSMUA_Achr9P04320_001 | Banana | nucleus | 7.22 | 20.03 |
| GSMUA_Achr8P02720_001 | Banana | nucleus | 7.83 | 19.74 |
| TraesCS1B01G297600.1 | Wheat | nucleus | 6.65 | 19.03 |
| HORVU1Hr1G012320.1 | Barley | cytosol, nucleus | 3.3 | 18.62 |
| TraesCS1D01G287200.1 | Wheat | nucleus | 6.65 | 18.58 |
| TraesCS1A01G288200.1 | Wheat | nucleus | 6.47 | 18.0 |
| Zm00001d041940_P001 | Maize | nucleus | 7.13 | 17.83 |
| GSMUA_Achr11P... | Banana | nucleus | 6.13 | 17.81 |
| Bra001301.1-P | Field mustard | nucleus | 2.78 | 17.46 |
| HORVU1Hr1G071590.1 | Barley | nucleus | 10.24 | 17.01 |
| Zm00001d011770_P001 | Maize | nucleus | 7.08 | 16.87 |
| Zm00001d038396_P003 | Maize | nucleus | 10.62 | 16.67 |
| TraesCS1B01G297800.1 | Wheat | nucleus | 9.34 | 16.56 |
| KXG34235 | Sorghum | nucleus | 6.89 | 16.35 |
| TraesCS1A01G288400.1 | Wheat | nucleus | 9.25 | 16.35 |
| TraesCS1D01G287400.1 | Wheat | nucleus | 9.16 | 16.13 |
| Os05t0463400-01 | Rice | nucleus | 4.72 | 16.1 |
| Solyc02g086750.1.1 | Tomato | nucleus | 6.32 | 16.05 |
| Solyc01g067040.1.1 | Tomato | nucleus | 5.1 | 15.98 |
| OQU78150 | Sorghum | nucleus | 9.96 | 15.23 |
| Os11t0303500-01 | Rice | nucleus | 4.96 | 14.5 |
| Zm00001d010556_P002 | Maize | nucleus | 12.08 | 13.79 |
| GSMUA_Achr5P29300_001 | Banana | nucleus | 10.1 | 13.53 |
| Solyc01g099360.2.1 | Tomato | nucleus | 5.85 | 12.31 |
| TraesCS3B01G603700.1 | Wheat | nucleus | 1.09 | 11.92 |
| TraesCS3B01G603600.1 | Wheat | nucleus | 6.18 | 8.64 |
| HORVU3Hr1G117730.2 | Barley | nucleus, plastid | 6.65 | 8.03 |
| Solyc04g049930.2.1 | Tomato | nucleus | 2.97 | 7.8 |
| TraesCS3D01G543800.1 | Wheat | nucleus | 4.81 | 6.67 |
| Solyc06g071490.1.1 | Tomato | nucleus | 2.74 | 5.11 |
Protein Annotations
| EnsemblPlants:Solyc09g007340.2.1 | EnsemblPlantsGene:Solyc09g007340.2 | Gene3D:2.30.30.140 | InterPro:IPR000313 | InterPro:PWWP_dom | ncoils:Coil |
| PANTHER:PTHR42851 | PANTHER:PTHR42851:SF2 | PFAM:PF00855 | PFscan:PS50812 | SEG:seg | SMART:SM00293 |
| SUPFAM:SSF63748 | UniParc:UPI000276B719 | UniProt:K4CQC4 | MapMan:20.1.5.1.2 | : | : |
Description
No Description!
Coordinates
chr9:+:936911..949248
Molecular Weight (calculated)
230708.0 Da
IEP (calculated)
4.905
GRAVY (calculated)
-0.522
Length
2119 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEGLGVEIDL GPCDLEGGMG FAGYGRLDGE LVVDLTRFSQ LTRRGNIVEG ADNMQEVSGG TNGSVRDGRT VNFNDGIHVG LDAVIPERRE VKHRMEDEGK
0101: FNVSDLVWGK VRSHPWWPGQ ILDPSAASNS AMKYFKKNCY LIAYFGDQTF AWNEASSIKP FQMYFSRMEK QCNSENFSHA VNCALDEVSR RVELGLACPC
0201: LLEETRAKME CQIVAVAGIQ AESNMRIGSD NFSDQTPFNP AELVRTLKSV AAAPHSRLDR LSFVLAKAQL VAFNRWNGYN EHPVIEELCD LFENDNDVEP
0301: LPGKKDASDV VSEENSNVQG TSSTKRPRCS GIADHPGKKV KSMSMLVYGS SSRISNDQKK SRGIAGRERK SVSSEKRHLT SEYMPSNSKA KRRKKELSQS
0401: SRNKISLPSH KAARRNLKSI DRNSRRTSEH NENSRNIGFG DSVLGLVKSE GAQLIPKKLP SSTEMLSKLY SAARDPMNAS SILLSQASLF CDYRNLTCSE
0501: TTVSADHSKL TEKHIGQNPS NLATETLLIE GIEDSYWTDR IIQCNPEDQV LFESEVQNEE DFPNAKWEIS PGLSTILDHK QEVGPSVENS ERENLSDLVD
0601: GSSEYSPTML ILKFSDLESV PPVVDLNIIF SQYGPLCESE TKLIHKRKQV KVVFKRRADA ETAFSKSGKF SIFGPSLISY RLQYSPSPCK ASCTSKRKRK
0701: YAASLMIYYK SRFYLVYWGA EIGIIDVQDG PEPRVESRLI HLDDNRDLFS QGNVQYYLVE VNDALLLLVR FGRNRPDVED GVDTCKCEVY ELDAVEGAIN
0801: IQEGMDMAGK GNNDEQFPQL HESKEPEKAR RKGKVNLRKS LAWDSAFFTD AGVLDADELS CMIKGGDKQT LPMIEEDVRQ SLDSISTLES DNLTLEHIES
0901: ELFGDIRASI QKVAIPTSGD LSAKTDNVAN SSAKKVDLAS KDRMKPKIAP KRTSGAQAGI PKSQPKQITG TQRLGKGLNQ DKAQVTQSIS RTTSVASLKP
1001: PKVNTKLQPV YASKRASLDI TRVKSDNDSM KISTASVRGA QTPKASALNK TSRVLPKPAT SMKPSSVGSS PAMKMHAIRS SSDSSGSTSS DKTAKSSIPV
1101: VRRKIDSKPI AQPSASAKLK TPSKAAVKSK LPSGNSAVSA YLMSSKINAN ISPASSISEW SSVSSSSSAI QRSSKLRTSF DTSSCRSFDS DTSALDINNQ
1201: LIDQKSDKPE IRGTTLPRES SKQAGSVSRP ASMMKPTGLR MPSPKMGYFD GVKAVRTPNG THSNPSTALY KKEATICSPK VNSNNKAKSV KVPLRANREP
1301: ETLKHLSPLS SSDKSNNSDN HSGTQSSSAS PVPKTETIVC SPKGNSNTIA KSVRVPLRAN KKPETLKHRS PASSSDKSNV SDNHIGGPSD ITLIPELSLE
1401: VQHEISGANI DVLAEEPDPF EHIQSAGWVA TQGENQGIAS ALNSEEDKAE GRDTVEHVAD ASLVATKSEN QGTASILNNE EVVSLVSSMS EIQGIASKLN
1501: NEEVVAEGPD TVEHVADASL LAAILNNGEV VAKGSDTVEH VADASLVAEV VAEGSGTVDH VADASLVSTI LNNEEVVPEG PVTVEHVADY SLVAAILNNE
1601: EVVAEGSDTV EHAADASLVA AILNNEEVVA EGPDTVEHVA DDGLVAIKSE QQVIDNNDIH EIKSENQIIA NTLNNEVVAE VPEAVEHIAG DALFAIESEN
1701: EVIVKNDTNV IKSEYLRLEE VVADEPDTVE HVACDGLVAI KTENKVTVNN DTNVINSEHQ RIEEVVADEP DTVEHVAGNG LVAIKSENQV IVTNDTDVIM
1801: SEHQRIEEVV ADEPVTVEHV AGDGLVVMKS ENQVTLNNDT VVIKSESQRV ASTLNNKDFV AEGPDTVEDV PGDGFAAIES ENHSVLNNDI PAGLAAIKGQ
1901: KQGVMENEMN LDTIEKIDIK PVEVSITENI RRCQTEDEDG VGVQCNGNYN LDVPSQMNEM NLEDNENGYN LDMPSQMDEM NLEDDVNGDL KHTRTDHVER
2001: EYDSTFRGDE GRVDVKDDLN TPEKTNAKKY VCANQADQSN SQVEEVSMTP FSNKVESLMN KLAYLSLNTP QTAVRRIPFA VKNSSGDCLD FCEGAGHVVG
2101: KTDLDLPSLQ IDHKENNNL
0101: FNVSDLVWGK VRSHPWWPGQ ILDPSAASNS AMKYFKKNCY LIAYFGDQTF AWNEASSIKP FQMYFSRMEK QCNSENFSHA VNCALDEVSR RVELGLACPC
0201: LLEETRAKME CQIVAVAGIQ AESNMRIGSD NFSDQTPFNP AELVRTLKSV AAAPHSRLDR LSFVLAKAQL VAFNRWNGYN EHPVIEELCD LFENDNDVEP
0301: LPGKKDASDV VSEENSNVQG TSSTKRPRCS GIADHPGKKV KSMSMLVYGS SSRISNDQKK SRGIAGRERK SVSSEKRHLT SEYMPSNSKA KRRKKELSQS
0401: SRNKISLPSH KAARRNLKSI DRNSRRTSEH NENSRNIGFG DSVLGLVKSE GAQLIPKKLP SSTEMLSKLY SAARDPMNAS SILLSQASLF CDYRNLTCSE
0501: TTVSADHSKL TEKHIGQNPS NLATETLLIE GIEDSYWTDR IIQCNPEDQV LFESEVQNEE DFPNAKWEIS PGLSTILDHK QEVGPSVENS ERENLSDLVD
0601: GSSEYSPTML ILKFSDLESV PPVVDLNIIF SQYGPLCESE TKLIHKRKQV KVVFKRRADA ETAFSKSGKF SIFGPSLISY RLQYSPSPCK ASCTSKRKRK
0701: YAASLMIYYK SRFYLVYWGA EIGIIDVQDG PEPRVESRLI HLDDNRDLFS QGNVQYYLVE VNDALLLLVR FGRNRPDVED GVDTCKCEVY ELDAVEGAIN
0801: IQEGMDMAGK GNNDEQFPQL HESKEPEKAR RKGKVNLRKS LAWDSAFFTD AGVLDADELS CMIKGGDKQT LPMIEEDVRQ SLDSISTLES DNLTLEHIES
0901: ELFGDIRASI QKVAIPTSGD LSAKTDNVAN SSAKKVDLAS KDRMKPKIAP KRTSGAQAGI PKSQPKQITG TQRLGKGLNQ DKAQVTQSIS RTTSVASLKP
1001: PKVNTKLQPV YASKRASLDI TRVKSDNDSM KISTASVRGA QTPKASALNK TSRVLPKPAT SMKPSSVGSS PAMKMHAIRS SSDSSGSTSS DKTAKSSIPV
1101: VRRKIDSKPI AQPSASAKLK TPSKAAVKSK LPSGNSAVSA YLMSSKINAN ISPASSISEW SSVSSSSSAI QRSSKLRTSF DTSSCRSFDS DTSALDINNQ
1201: LIDQKSDKPE IRGTTLPRES SKQAGSVSRP ASMMKPTGLR MPSPKMGYFD GVKAVRTPNG THSNPSTALY KKEATICSPK VNSNNKAKSV KVPLRANREP
1301: ETLKHLSPLS SSDKSNNSDN HSGTQSSSAS PVPKTETIVC SPKGNSNTIA KSVRVPLRAN KKPETLKHRS PASSSDKSNV SDNHIGGPSD ITLIPELSLE
1401: VQHEISGANI DVLAEEPDPF EHIQSAGWVA TQGENQGIAS ALNSEEDKAE GRDTVEHVAD ASLVATKSEN QGTASILNNE EVVSLVSSMS EIQGIASKLN
1501: NEEVVAEGPD TVEHVADASL LAAILNNGEV VAKGSDTVEH VADASLVAEV VAEGSGTVDH VADASLVSTI LNNEEVVPEG PVTVEHVADY SLVAAILNNE
1601: EVVAEGSDTV EHAADASLVA AILNNEEVVA EGPDTVEHVA DDGLVAIKSE QQVIDNNDIH EIKSENQIIA NTLNNEVVAE VPEAVEHIAG DALFAIESEN
1701: EVIVKNDTNV IKSEYLRLEE VVADEPDTVE HVACDGLVAI KTENKVTVNN DTNVINSEHQ RIEEVVADEP DTVEHVAGNG LVAIKSENQV IVTNDTDVIM
1801: SEHQRIEEVV ADEPVTVEHV AGDGLVVMKS ENQVTLNNDT VVIKSESQRV ASTLNNKDFV AEGPDTVEDV PGDGFAAIES ENHSVLNNDI PAGLAAIKGQ
1901: KQGVMENEMN LDTIEKIDIK PVEVSITENI RRCQTEDEDG VGVQCNGNYN LDVPSQMNEM NLEDNENGYN LDMPSQMDEM NLEDDVNGDL KHTRTDHVER
2001: EYDSTFRGDE GRVDVKDDLN TPEKTNAKKY VCANQADQSN SQVEEVSMTP FSNKVESLMN KLAYLSLNTP QTAVRRIPFA VKNSSGDCLD FCEGAGHVVG
2101: KTDLDLPSLQ IDHKENNNL
001: MSTEPEGVES DSNADFAINA SSFDYGMAHT SETLADPMSF QAQDLVVNLT GVERKVFVSA RDDKDSLCNG VDFDADSDLL KNKDKKGFSK ENLKLFDSDL
101: VWAKLRSYPW WPGLVFDKSV ASKAAMRHFK KGNVLVAYFG DCTFAWNNAS QIKPFHQNFS QMQEQSNSAE FRDAIDCALD EVSRRVEFGL SCSCVSEEAY
201: NKLKTQNIIN AGIREDSSVR YGGDKLSDGI SFEPAKLVDY MKHLACFPCY DATEKLQFVI NRAQVLAFQQ WKDYSHFIDY ETFVRSVESA ATLASLPEVN
301: MDEGISAKKR KTDYKDNAEQ TKEKTLSDLT VKKRCGSRST EKLDGKSHSE KKRKVESSES GKSEKRIKKS QQKEDSVSKH SNEESLLSVG DTNKLQKTAE
401: PCHGTGVENE MNSLTPTLKP CRASKSTEVE NEKTKKPRHQ ELAERKISSP DEMLSSLHAA NTSTGIPDSI NIDPSNYEDF EKFINELFCS KLNGDSKKAS
501: ITETSEPCDK KDSAEEEILP ANKEITGSGS KEQIGLKDCS ADSLPPYALV LNFADSGSVP SEEKLNEIFK RYGPLHESKT KVTMKGKRAK VVFKRGEDAK
601: TAFSSAGKYS IFGPSLLSYR LEYVCPKRKK TT
101: VWAKLRSYPW WPGLVFDKSV ASKAAMRHFK KGNVLVAYFG DCTFAWNNAS QIKPFHQNFS QMQEQSNSAE FRDAIDCALD EVSRRVEFGL SCSCVSEEAY
201: NKLKTQNIIN AGIREDSSVR YGGDKLSDGI SFEPAKLVDY MKHLACFPCY DATEKLQFVI NRAQVLAFQQ WKDYSHFIDY ETFVRSVESA ATLASLPEVN
301: MDEGISAKKR KTDYKDNAEQ TKEKTLSDLT VKKRCGSRST EKLDGKSHSE KKRKVESSES GKSEKRIKKS QQKEDSVSKH SNEESLLSVG DTNKLQKTAE
401: PCHGTGVENE MNSLTPTLKP CRASKSTEVE NEKTKKPRHQ ELAERKISSP DEMLSSLHAA NTSTGIPDSI NIDPSNYEDF EKFINELFCS KLNGDSKKAS
501: ITETSEPCDK KDSAEEEILP ANKEITGSGS KEQIGLKDCS ADSLPPYALV LNFADSGSVP SEEKLNEIFK RYGPLHESKT KVTMKGKRAK VVFKRGEDAK
601: TAFSSAGKYS IFGPSLLSYR LEYVCPKRKK TT
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYZ0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.