Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES18937 | Sorghum | nucleus, plastid | 53.62 | 54.15 |
| Os05t0122500-00 | Rice | nucleus | 42.86 | 41.56 |
| TraesCS1D01G060800.1 | Wheat | cytosol | 37.18 | 34.8 |
| TraesCS1D01G060900.1 | Wheat | nucleus | 36.59 | 34.38 |
| TraesCS1A01G059700.1 | Wheat | cytosol | 24.66 | 33.87 |
| TraesCS1B01G077800.1 | Wheat | cytosol | 35.42 | 32.85 |
| TraesCS1B01G077900.1 | Wheat | nucleus | 35.62 | 32.67 |
| HORVU1Hr1G012310.1 | Barley | cytosol, nucleus | 23.09 | 31.13 |
| TraesCS1A01G059600.1 | Wheat | cytosol | 32.88 | 30.71 |
| HORVU1Hr1G012320.1 | Barley | cytosol, nucleus | 21.33 | 28.99 |
| Bra028857.1-P | Field mustard | nucleus | 19.18 | 21.3 |
| CDY04873 | Canola | nucleus | 18.98 | 21.09 |
| CDY55692 | Canola | nucleus | 18.4 | 20.75 |
| Zm00001d041940_P001 | Maize | nucleus | 29.55 | 17.83 |
| CDY07935 | Canola | nucleus | 18.98 | 17.17 |
| KRH32403 | Soybean | nucleus | 22.11 | 16.84 |
| AT5G02950.2 | Thale cress | nucleus | 19.96 | 16.14 |
| CDX73990 | Canola | nucleus | 17.81 | 15.72 |
| Zm00001d011770_P001 | Maize | nucleus | 27.2 | 15.64 |
| GSMUA_Achr10P... | Banana | nucleus | 19.57 | 14.1 |
| PGSC0003DMT400087303 | Potato | nucleus | 20.94 | 13.88 |
| GSMUA_Achr9P04320_001 | Banana | nucleus | 20.55 | 13.74 |
| KRH19811 | Soybean | nucleus | 20.74 | 13.62 |
| VIT_08s0040g02440.t01 | Wine grape | nucleus | 21.92 | 12.61 |
| AT3G09670.1 | Thale cress | nucleus | 17.81 | 12.53 |
| KRH34572 | Soybean | nucleus | 19.96 | 12.53 |
| GSMUA_Achr11P... | Banana | nucleus | 16.83 | 11.78 |
| KRH70385 | Soybean | nucleus | 22.9 | 11.53 |
| KRH33337 | Soybean | nucleus | 22.5 | 11.29 |
| Solyc04g049950.1.1 | Tomato | nucleus | 9.98 | 11.26 |
| Bra001301.1-P | Field mustard | nucleus | 7.44 | 11.24 |
| Zm00001d024841_P001 | Maize | nucleus | 17.22 | 10.35 |
| Zm00001d010869_P001 | Maize | nucleus | 16.63 | 8.63 |
| Zm00001d038396_P003 | Maize | nucleus | 22.7 | 8.59 |
| PGSC0003DMT400027409 | Potato | nucleus | 21.92 | 6.76 |
| VIT_13s0019g03620.t01 | Wine grape | nucleus | 23.68 | 6.45 |
| Zm00001d010556_P002 | Maize | nucleus | 22.9 | 6.3 |
| KRG92228 | Soybean | nucleus | 20.55 | 6.02 |
| Solyc09g007340.2.1 | Tomato | cytosol | 21.14 | 5.1 |
Protein Annotations
| EnsemblPlants:Zm00001d010984_P001 | EnsemblPlants:Zm00001d010984_T001 | EnsemblPlantsGene:Zm00001d010984 | Gene3D:2.30.30.140 | InterPro:IPR000313 | InterPro:PWWP_dom |
| PANTHER:PTHR42851 | PANTHER:PTHR42851:SF5 | PFAM:PF00855 | PFscan:PS50812 | ProteinID:AQK95415.1 | SEG:seg |
| SMART:SM00293 | SUPFAM:SSF63748 | UniParc:UPI000221177B | UniProt:K7VXY0 | MapMan:35.2 | : |
Description
Tudor/PWWP/MBT superfamily protein
Coordinates
chr8:+:135873289..135874824
Molecular Weight (calculated)
52936.8 Da
IEP (calculated)
10.430
GRAVY (calculated)
-0.127
Length
511 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPPLPGKD AAFGSGTTVR RPGRLRVMHP HVAELLRSPR RHARPAAAPQ AKAQAPVPER ARYACAFEDG GGVAAPGRLV WAKVRNHPWW PGQVFDAADA
101: SAVARARRRL RRAVLVAYFW DRTFAWTDAA ALLPLRAGFP RLAAVAPVAA AVDAALAEVA RRVLAGLSCC CGGGGDNEAT ASTQAIDNAG VRAGAPGAAV
201: DAAFARRALQ AEALLGYLSA LATSPRAGGD RVDLAVAAAQ LGALGRWKGS ARGLPEYTVV HGIDDAVVAA PGRAKAKRRR PPSTGVDGPA PAKRRVSRNT
301: HIAATKGNAA CDTGDYEALE LEDLPLGTPA QQTPTPTRIG KLMSRAAQNM SLSPVVLRVR ATAANGSNCA PPPPTAVLPA PHMVRCAVVA AHEQLPPTRK
401: DDSGDHEAWA GAGLVLNFSS AHAVPSARHL ATAFSRFGPV KEVRVDNTTV VFDSDAHADE AFSGAAEIGS ISASLVSFRV TSSLPAAPDD PAAQPQTQSM
501: PSDTSPVEAL R
101: SAVARARRRL RRAVLVAYFW DRTFAWTDAA ALLPLRAGFP RLAAVAPVAA AVDAALAEVA RRVLAGLSCC CGGGGDNEAT ASTQAIDNAG VRAGAPGAAV
201: DAAFARRALQ AEALLGYLSA LATSPRAGGD RVDLAVAAAQ LGALGRWKGS ARGLPEYTVV HGIDDAVVAA PGRAKAKRRR PPSTGVDGPA PAKRRVSRNT
301: HIAATKGNAA CDTGDYEALE LEDLPLGTPA QQTPTPTRIG KLMSRAAQNM SLSPVVLRVR ATAANGSNCA PPPPTAVLPA PHMVRCAVVA AHEQLPPTRK
401: DDSGDHEAWA GAGLVLNFSS AHAVPSARHL ATAFSRFGPV KEVRVDNTTV VFDSDAHADE AFSGAAEIGS ISASLVSFRV TSSLPAAPDD PAAQPQTQSM
501: PSDTSPVEAL R
001: MSTESERIES VSEANASSLE VGNDQMSEAL AGQAQELKTI GDDKEGCGNF ASAGDNGMEK VNGFTNLVKE TESVNGELDL GTRTENVGGE SNQSDKKVLV
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF36]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.