Factsheet for Os05t0122500-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010984_P001	Maize	plastid	41.56	42.86
TraesCS1D01G060800.1	Wheat	cytosol	43.64	42.12
TraesCS1B01G077800.1	Wheat	cytosol	42.13	40.29
TraesCS1A01G059700.1	Wheat	cytosol	27.89	39.52
EES18937	Sorghum	nucleus, plastid	37.38	38.93
TraesCS1D01G060900.1	Wheat	nucleus	38.71	37.5
TraesCS1B01G077900.1	Wheat	nucleus	38.52	36.45
TraesCS1A01G059600.1	Wheat	cytosol	37.57	36.2
HORVU1Hr1G012310.1	Barley	cytosol, nucleus	25.24	35.09
HORVU1Hr1G012320.1	Barley	cytosol, nucleus	21.82	30.59
CDY55692	Canola	nucleus	21.63	25.17
Bra028857.1-P	Field mustard	nucleus	21.44	24.57
CDY04873	Canola	nucleus	21.06	24.13
Os05t0463500-01	Rice	nucleus	17.65	20.26
Os05t0149200-01	Rice	plastid	13.85	19.52
AT5G02950.2	Thale cress	nucleus	22.2	18.51
KRH32403	Soybean	nucleus	22.2	17.44
CDY07935	Canola	nucleus	18.22	16.99
CDX73990	Canola	nucleus	18.6	16.93
GSMUA_Achr10P...	Banana	nucleus	22.01	16.36
KRH19811	Soybean	nucleus	23.72	16.07
Os05t0463400-01	Rice	nucleus	18.79	15.94
GSMUA_Achr9P04320_001	Banana	nucleus	22.39	15.45
PGSC0003DMT400087303	Potato	nucleus	22.39	15.3
GSMUA_Achr11P...	Banana	nucleus	20.87	15.07
VIT_08s0040g02440.t01	Wine grape	nucleus	23.72	14.08
AT3G09670.1	Thale cress	nucleus	18.98	13.77
KRH34572	Soybean	nucleus	20.68	13.39
Solyc04g049950.1.1	Tomato	nucleus	11.2	13.02
KRH70385	Soybean	nucleus	24.29	12.61
KRH33337	Soybean	nucleus	24.1	12.46
Os11t0303500-01	Rice	nucleus	16.7	12.15
Bra001301.1-P	Field mustard	nucleus	7.02	10.95
PGSC0003DMT400027409	Potato	nucleus	24.67	7.85
VIT_13s0019g03620.t01	Wine grape	nucleus	26.57	7.46
KRG92228	Soybean	nucleus	21.06	6.36
Solyc09g007340.2.1	Tomato	cytosol	23.15	5.76

Protein Annotations

Gene3D:2.30.30.140	MapMan:35.2	UniProt:A0A0P0WHB3	ProteinID:BAS92035.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR000313	InterPro:IPR000504	EnsemblPlantsGene:Os05g0122500	EnsemblPlants:Os05t0122500-00
PFAM:PF00855	PFscan:PS50102	PFscan:PS50812	PANTHER:PTHR42851	PANTHER:PTHR42851:SF5	InterPro:PWWP_dom
InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00293	SUPFAM:SSF54928	SUPFAM:SSF63748	UniParc:UPI000393AF4F
SEG:seg	:	:	:	:	:

Description

Similar to PWWP domain containing protein, expressed. (Os05t0122500-00)

Coordinates

chr5:-:1231013..1232703

Molecular Weight (calculated)

56448.3 Da

IEP (calculated)

8.918

GRAVY (calculated)

-0.258

Length

527 amino acids

Sequence
(BLAST)

001: TPSQTLLCSG ELPPPPSPTP AISPAISSSP SKNTTLRYKG AAAHGAVAKN GGEGEVSAVR RPGRPRVVHP DVAEFLLNFR RLRREKKKRA TPRPAVVVVP
101: GERARYDCAF EDEGEVGRRG GFAPGRLVWG KVRCHPWWPG QVFDPADASE QALEERRKHG ATLVAFFWDK TFAWVDADEL LPFRGDGGDF ALLAGQSAHA
201: MPALTASVDA ALGEVARRVA AGLSCCCCCD GAAVAKKQVI ENAGIREGAH GATVDAAFTR GALRGEAFVG YVSALAVAPL AGADRLDLAI ATAQLKAFDR
301: WRGAAARSLP EYTCHHGIEA NAMAPRRKRG RATKNTITGN VDDDASELEN FEPTPQPLSH QMSTKIGKLM SRAAQQMSRS PAVIHRDTTT TTTNGDAPPP
401: PPPAISLTMG RCTRSADEKK KNSDIREDPF LAGLVLNFIC PSAVLPLSEL VNIFSKFGPI MEAKTENAYA MVMFKRRADA EAAFSGTTKI NALSSSLISF
501: RLNYSMSASP IDSPECSLNT AMDRLLF

Best Arabidopsis Sequence Match ( AT3G09670.1 )
(BLAST)

001: MSTESERIES VSEANASSLE VGNDQMSEAL AGQAQELKTI GDDKEGCGNF ASAGDNGMEK VNGFTNLVKE TESVNGELDL GTRTENVGGE SNQSDKKVLV
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE

Arabidopsis Description

Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF36]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.