Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G012320.1 | Barley | cytosol, nucleus | 38.79 | 39.1 |
| TraesCS1B01G077800.1 | Wheat | cytosol | 53.03 | 36.48 |
| TraesCS1A01G059600.1 | Wheat | cytosol | 51.98 | 36.01 |
| TraesCS1D01G060800.1 | Wheat | cytosol | 48.55 | 33.7 |
| HORVU3Hr1G117740.2 | Barley | nucleus | 13.19 | 26.04 |
| Os05t0122500-00 | Rice | nucleus | 35.09 | 25.24 |
| Zm00001d010984_P001 | Maize | plastid | 31.13 | 23.09 |
| EES18937 | Sorghum | nucleus, plastid | 28.76 | 21.54 |
| CDY55692 | Canola | nucleus | 17.68 | 14.79 |
| Bra028857.1-P | Field mustard | nucleus | 16.89 | 13.91 |
| CDY04873 | Canola | nucleus | 16.89 | 13.91 |
| Bra001301.1-P | Field mustard | nucleus | 12.4 | 13.91 |
| KRH32403 | Soybean | nucleus | 21.9 | 12.37 |
| AT5G02950.2 | Thale cress | nucleus | 19.0 | 11.39 |
| HORVU1Hr1G071710.17 | Barley | endoplasmic reticulum | 16.09 | 11.07 |
| PGSC0003DMT400087303 | Potato | nucleus | 21.37 | 10.51 |
| KRH19811 | Soybean | nucleus | 20.84 | 10.15 |
| CDY07935 | Canola | nucleus | 15.04 | 10.09 |
| GSMUA_Achr9P04320_001 | Banana | nucleus | 19.53 | 9.69 |
| CDX73990 | Canola | nucleus | 14.78 | 9.67 |
| KRH34572 | Soybean | nucleus | 19.0 | 8.85 |
| VIT_08s0040g02440.t01 | Wine grape | nucleus | 20.32 | 8.67 |
| Solyc04g049950.1.1 | Tomato | nucleus | 10.29 | 8.61 |
| KRH70385 | Soybean | nucleus | 21.64 | 8.08 |
| KRH33337 | Soybean | nucleus | 21.37 | 7.95 |
| AT3G09670.1 | Thale cress | nucleus | 14.51 | 7.58 |
| GSMUA_Achr10P... | Banana | nucleus | 12.93 | 6.91 |
| GSMUA_Achr11P... | Banana | nucleus | 13.19 | 6.85 |
| HORVU1Hr1G020500.2 | Barley | nucleus, plastid | 16.89 | 5.88 |
| HORVU1Hr1G071590.1 | Barley | nucleus | 19.26 | 5.72 |
| KRG92228 | Soybean | nucleus | 21.11 | 4.58 |
| VIT_13s0019g03620.t01 | Wine grape | nucleus | 22.69 | 4.58 |
| HORVU3Hr1G117730.2 | Barley | nucleus, plastid | 20.84 | 4.5 |
| PGSC0003DMT400027409 | Potato | nucleus | 18.47 | 4.23 |
| Solyc09g007340.2.1 | Tomato | cytosol | 21.37 | 3.82 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G012310.1 | EnsemblPlantsGene:HORVU1Hr1G012310 | PANTHER:PTHR42851 | PANTHER:PTHR42851:SF5 | SEG:seg | UniParc:UPI000B46FA29 |
| UniProt:A0A287ENH0 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:30853195..30854633
Molecular Weight (calculated)
40473.1 Da
IEP (calculated)
9.310
GRAVY (calculated)
-0.408
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: RRVEAGLSCG CGVSKKKQVI DNDGVREGAH GAVVDAGFAR DAFRGEAFVE YVSALAVAPL EGADRLELTV ATAQLTAFTR WRGTRGLPVY TACHGIGVAD
101: GVMEGTPALR AARRGRTKSD VADGIMEGTP ARRATKRGRP KGDVADGIME GTPARRAAKR GRPKGKRKMS RDCTCDASAS ESAENPLELE NYEPARPRHV
201: SHQTTTKMGR LMSLAARRMS LSPVTRRLAD PQANAGVTMT RCTSAAAADH TNAAPSVNLK NCGLNKDDEP SLTGLALNFT GPDTVPPASD LVKIFSKFGP
301: VVEARPEGST VSVVIFERKL DAEAAFSRAE KIRALSPNLV SYRLAHSLSA RPPADFPQSP MNTDEMNHLF VDVDDEALH
101: GVMEGTPALR AARRGRTKSD VADGIMEGTP ARRATKRGRP KGDVADGIME GTPARRAAKR GRPKGKRKMS RDCTCDASAS ESAENPLELE NYEPARPRHV
201: SHQTTTKMGR LMSLAARRMS LSPVTRRLAD PQANAGVTMT RCTSAAAADH TNAAPSVNLK NCGLNKDDEP SLTGLALNFT GPDTVPPASD LVKIFSKFGP
301: VVEARPEGST VSVVIFERKL DAEAAFSRAE KIRALSPNLV SYRLAHSLSA RPPADFPQSP MNTDEMNHLF VDVDDEALH
001: MSTESERIES VSEANASSLE VGNDQMSEAL AGQAQELKTI GDDKEGCGNF ASAGDNGMEK VNGFTNLVKE TESVNGELDL GTRTENVGGE SNQSDKKVLV
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF36]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.