Factsheet for GSMUA_Achr9P04320_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04873	Canola	nucleus	17.41	28.91
CDY55692	Canola	nucleus	17.02	28.7
Bra028857.1-P	Field mustard	nucleus	17.28	28.7
GSMUA_Achr11P...	Banana	nucleus	26.31	27.53
KRH32403	Soybean	nucleus	22.64	25.78
GSMUA_Achr8P02720_001	Banana	nucleus	27.88	25.33
GSMUA_Achr10P...	Banana	nucleus	23.3	25.11
HORVU3Hr1G117740.2	Barley	nucleus	6.15	24.48
TraesCS1D01G060800.1	Wheat	cytosol	16.1	22.53
KRH19811	Soybean	nucleus	22.91	22.49
Os05t0122500-00	Rice	nucleus	15.45	22.39
AT5G02950.2	Thale cress	nucleus	18.46	22.31
CDY07935	Canola	nucleus	16.36	22.12
TraesCS1A01G059600.1	Wheat	cytosol	15.45	21.57
EES18937	Sorghum	nucleus, plastid	14.14	21.34
TraesCS1B01G077800.1	Wheat	cytosol	15.31	21.23
VIT_08s0040g02440.t01	Wine grape	nucleus	24.61	21.17
TraesCS1D01G060900.1	Wheat	nucleus	14.79	20.77
Zm00001d010984_P001	Maize	plastid	13.74	20.55
PGSC0003DMT400087303	Potato	nucleus	20.68	20.49
CDX73990	Canola	nucleus	15.05	19.86
TraesCS1B01G077900.1	Wheat	nucleus	14.4	19.75
HORVU1Hr1G012310.1	Barley	cytosol, nucleus	9.69	19.53
TraesCS1A01G059700.1	Wheat	cytosol	9.42	19.35
KRH34572	Soybean	nucleus	20.42	19.16
Zm00001d041940_P001	Maize	nucleus	20.94	18.89
Zm00001d011770_P001	Maize	nucleus	21.73	18.67
AT3G09670.1	Thale cress	nucleus	17.41	18.32
KXG34235	Sorghum	nucleus	21.2	18.14
KRH70385	Soybean	nucleus	23.95	18.03
KRH33337	Soybean	nucleus	23.95	17.96
Solyc04g049950.1.1	Tomato	nucleus	10.47	17.66
HORVU1Hr1G012320.1	Barley	cytosol, nucleus	8.64	17.55
Bra001301.1-P	Field mustard	nucleus	6.54	14.79
GSMUA_Achr5P29300_001	Banana	nucleus	29.97	14.48
Os11t0303500-01	Rice	nucleus	13.22	13.95
PGSC0003DMT400027409	Potato	nucleus	25.0	11.53
GSMUA_Achr8P06730_001	Banana	nucleus	14.53	10.91
GSMUA_Achr3P23960_001	Banana	nucleus	14.14	10.54
VIT_13s0019g03620.t01	Wine grape	nucleus	24.48	9.96
KRG92228	Soybean	nucleus	20.29	8.88
TraesCS3B01G603600.1	Wheat	nucleus	14.92	7.51
Solyc09g007340.2.1	Tomato	cytosol	20.03	7.22
HORVU3Hr1G117730.2	Barley	nucleus, plastid	16.23	7.06
TraesCS3B01G603700.1	Wheat	nucleus	1.7	6.74
TraesCS3D01G543800.1	Wheat	nucleus	12.17	6.08

Protein Annotations

Gene3D:2.30.30.140	MapMan:35.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	EnsemblPlantsGene:GSMUA_Achr9G04320_001
EnsemblPlants:GSMUA_Achr9P04320_001	EnsemblPlants:GSMUA_Achr9T04320_001	InterPro:IPR000313	InterPro:IPR000504	UniProt:M0TXE1	PFAM:PF00076
PFAM:PF00855	PFscan:PS50812	PANTHER:PTHR42851	PANTHER:PTHR42851:SF4	InterPro:PWWP_dom	InterPro:RBD_domain_sf
InterPro:RRM_dom	SMART:SM00293	SUPFAM:SSF54928	SUPFAM:SSF63748	UniParc:UPI00029632DF	SEG:seg

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G04320_001]

Coordinates

chr9:-:2881487..2884201

Molecular Weight (calculated)

83427.3 Da

IEP (calculated)

5.254

GRAVY (calculated)

-0.630

Length

764 amino acids

Sequence
(BLAST)

001: MESSPSAKKT GGGSLDLNSV ASEQPETLAS PVDLGSGALE VGARDDASAV GRRNVVGEQA EEVGVEQDGV EKKDSMAGEE VVQAAGGERG NGYSGAVDVG
101: DVKDVVEATD GKDTEDRGEG AEAEAGEVNV AVEVKPWYED ADVVDEKATI EGDTVSREMA SNVGREAGGG EDQYVKVGEQ ESTARRKRGR PRKLVNKGDS
201: VSQDVGRKAG TDTLSSEEQV LSAKRMRGRP RRAVTACIDD AYRHYHFQEE KKDPFAASNL VWGKVRSHPW WPGQIFDPLD ASEMASNIQK KDHHLVAYFG
301: DRTFAWCDDS RLKPFQTHFS QMEKQSSMDA FVSAISDALE EVSRRIELGM TCHCFMDETY ARVNDQKVEN AGIRKETCIS AIDKSWIVSS FDTVGLLDRI
401: QTLARFPYGA VDRLELAITK SLLKAFYHSK GYPELPVFVY GEGLGDNVEG SLTKRRTSGK DVADPSTPTL SDTASRKGKS RVRGSSFRKD KHIVEHELEV
501: ADSDGVESGK SKKKKLDSLG DLTTMSQISR SKKQPKFGEC MRRVAGQMSG PPPMLKLSGK SVTKPPTILS HRKGGIPRDY SSPGTVAGKR DRRKSTSFTA
601: AFSEKLDYMQ DSYWSDIIVS DEENLVSLPD TKQHLQDDST NTNNEVECEG PTSNLQNDID ECMPTALVLT FSEASSIPAE ADLIKLFGRY GPLVEAETEV
701: TKSKNHAKIV FKRRSDAEVA LSNAGKYSIF GHTLVSYRLR VLEVEPKASL SSTPLSEQDA LPVA

Best Arabidopsis Sequence Match ( AT5G02950.1 )
(BLAST)

001: MSTEPEGVES DSNADFAINA SSFDYGMAHT SETLADPMSF QAQDLVVNLT GVERKVFVSA RDDKDSLCNG VDFDADSDLL KNKDKKGFSK ENLKLFDSDL
101: VWAKLRSYPW WPGLVFDKSV ASKAAMRHFK KGNVLVAYFG DCTFAWNNAS QIKPFHQNFS QMQEQSNSAE FRDAIDCALD EVSRRVEFGL SCSCVSEEAY
201: NKLKTQNIIN AGIREDSSVR YGGDKLSDGI SFEPAKLVDY MKHLACFPCY DATEKLQFVI NRAQVLAFQQ WKDYSHFIDY ETFVRSVESA ATLASLPEVN
301: MDEGISAKKR KTDYKDNAEQ TKEKTLSDLT VKKRCGSRST EKLDGKSHSE KKRKVESSES GKSEKRIKKS QQKEDSVSKH SNEESLLSVG DTNKLQKTAE
401: PCHGTGVENE MNSLTPTLKP CRASKSTEVE NEKTKKPRHQ ELAERKISSP DEMLSSLHAA NTSTGIPDSI NIDPSNYEDF EKFINELFCS KLNGDSKKAS
501: ITETSEPCDK KDSAEEEILP ANKEITGSGS KEQIGLKDCS ADSLPPYALV LNFADSGSVP SEEKLNEIFK RYGPLHESKT KVTMKGKRAK VVFKRGEDAK
601: TAFSSAGKYS IFGPSLLSYR LEYVCPKRKK TT

Arabidopsis Description

Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYZ0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.