Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G117730.2 | Barley | nucleus, plastid | 30.0 | 26.12 |
| TraesCS3B01G603600.1 | Wheat | nucleus | 18.82 | 18.98 |
| Bra028857.1-P | Field mustard | nucleus | 5.03 | 16.74 |
| CDY04873 | Canola | nucleus | 4.9 | 16.3 |
| TraesCS1D01G060900.1 | Wheat | nucleus | 5.75 | 16.18 |
| CDY55692 | Canola | nucleus | 4.64 | 15.67 |
| TraesCS1D01G060800.1 | Wheat | cytosol | 5.23 | 14.65 |
| CDX73990 | Canola | nucleus | 5.42 | 14.34 |
| KRH32403 | Soybean | nucleus | 6.08 | 13.86 |
| CDY07935 | Canola | nucleus | 5.1 | 13.81 |
| AT5G02950.2 | Thale cress | nucleus | 5.36 | 12.97 |
| AT3G09670.1 | Thale cress | nucleus | 6.08 | 12.81 |
| GSMUA_Achr9P04320_001 | Banana | nucleus | 6.08 | 12.17 |
| GSMUA_Achr10P... | Banana | nucleus | 5.56 | 11.99 |
| KRH19811 | Soybean | nucleus | 5.95 | 11.7 |
| Solyc04g049950.1.1 | Tomato | nucleus | 3.4 | 11.48 |
| GSMUA_Achr11P... | Banana | nucleus | 5.16 | 10.82 |
| TraesCS1D01G287200.1 | Wheat | nucleus | 5.36 | 10.8 |
| PGSC0003DMT400087303 | Potato | nucleus | 5.42 | 10.77 |
| TraesCS1D01G287400.1 | Wheat | nucleus | 8.37 | 10.64 |
| VIT_08s0040g02440.t01 | Wine grape | nucleus | 5.95 | 10.25 |
| KRH33337 | Soybean | nucleus | 6.34 | 9.52 |
| KRH70385 | Soybean | nucleus | 6.14 | 9.26 |
| TraesCS1D01G097400.1 | Wheat | plastid | 6.01 | 8.83 |
| Bra001301.1-P | Field mustard | nucleus | 1.83 | 8.28 |
| KRH34572 | Soybean | nucleus | 4.31 | 8.11 |
| KRG92228 | Soybean | nucleus | 6.99 | 6.13 |
| PGSC0003DMT400027409 | Potato | nucleus | 6.01 | 5.56 |
| VIT_13s0019g03620.t01 | Wine grape | nucleus | 6.6 | 5.38 |
| Solyc09g007340.2.1 | Tomato | cytosol | 6.67 | 4.81 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G543800.1 | EnsemblPlantsGene:TraesCS3D01G543800 | Gene3D:2.30.30.140 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR000313 | InterPro:PWWP_dom | InterPro:RBD_domain_sf | PANTHER:PTHR35491 | PANTHER:PTHR35491:SF3 | PFAM:PF00855 |
| PFscan:PS50812 | SEG:seg | SUPFAM:SSF54928 | SUPFAM:SSF63748 | TIGR:cd05162 | MapMan:35.2 |
Description
No Description!
Coordinates
chr3D:+:613732672..613737768
Molecular Weight (calculated)
163843.0 Da
IEP (calculated)
5.173
GRAVY (calculated)
-1.074
Length
1530 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAQAPEGEG PAPARPSRIR VMRPEVEEVL KSPRRGRAKL HKEGGGEQED DAGARPRYDC PFQDEEKEGQ QGFAPPDVVW CKVRSHPWWP AQVFDAADAS
0101: ELALRHARPG APLVAYFWDR TFAWMDPSVL RPFRAHFPRL AAQSSSRKRD APAKEPEVAI DVEDSPPMPR DRIMDTSEDA ADKGEAPANK DAAIVEDTPM
0201: PSTKHRKSKR GSKTSAEKKK KDTSKDTADK GESQPEAEPA KEDDVNGDSS MPSVEVTDDT LSKQRKSKRV SKSAAESKKK DTSKDTADKG ESLPEAEPAK
0301: EDDVDEDSSM PSSGAADDTS SKGRKSRRAT RSSAKTKKND TSKDTDKTDS VTEPAKEVTE NEDSSMPSAE ATDDTVSKGR KSKKSKGSAK TKKRDADKNE
0401: SVPEPAKDVA ENEDSSMPSA EAIDGALSKE TNSKSSTRSA KKKKKKDAGK KESLPDPAKE GAENKDSSMP SGGATDGALS KETNSKISTR SAKKKKKESL
0501: PEPAKEKATG TGSSTPSRVA ADDTPSKKRK SSKKSSASNR IIDTSMDAVD GMLSERKSGR RLRSSHKIVE ALEVMKWPRK KDAGETTKVK DKDAALPKEN
0601: NLGRRAGSAR HKDKTTITKD GDGLRVSPLK KRLHLDVHSA TENAPFAVSE LGRKKKTLIE LLAETATPNP SAGGKSKARA ERPLPSSILK PEATPNTRGK
0701: RSLPASTETP EDPGRDKDTM NTREKRSVAS STEKPERDTR STVKTRGKSS LPSSAEEPED PDRDKNDTMK TRGKRSLPAS AEKRQDPDRG TKGTAKTRGK
0801: RSLPESTEDP DRVTKGSSKT KGKGSLPEST EEPEGPDDRD MKDSMHTRKR KKLDTLGDLS SQPQPVSPKG STKAREVKRK AAGQKSQASP VVKANGGISG
0901: DTSSKRSARR KAAEPKPQET PVVKANGEAS QTRSRRAKNS EVTVPDKSPR SVKLDKGKKG AVAEDSPSCG EMLSQLCVGA SDAEKMGKIA PASASFLTDF
1001: LKSARACTSD VEEAANTDCR ASSPDADEEI PEKAAADKVS SPNADEEMPE EAAADEISSP HAVEEIPEKA TDNVSSPHAD LEVPEEAADK VSSPHADDEV
1101: IPEEAAEKVS SPSADEAIPE EAAEKVSSPN ADEVMPEKAA DEVSSVPANE ATPEKAAEKV SSPNADEVIP EEAAEKAIPE EAADEVSLAP ADEETLLKVK
1201: EEVSSPLADE ETLEKATTEN VSSATADEET LETAAAEKVS SAPADEETSE TAATEKVSNA PAGEETLEKV KEEVSSPHAD EAIPEKAAEK VSSPHADEAT
1301: PEKAADEVSS PPADVETPEK ATEKVCCPPA DEEIAEKPSD KVSSPHAEAE MSEKAAKSSP APSEPPVVCD DMKDNYWSDI LINVEEPLSS LAKKKDKGKM
1401: RSSKKQRRDD EMKQDEMLLA EAENGKANGA EEDVSLTGLV LHFSKPGAVP SRGDLIEIFS QYGPVSEART ETDEHSSSAQ VVFRRRADAE AAFGGAGKIV
1501: ALRPGLDSFR LTDFPCATAA FRVEDGPKQG
0101: ELALRHARPG APLVAYFWDR TFAWMDPSVL RPFRAHFPRL AAQSSSRKRD APAKEPEVAI DVEDSPPMPR DRIMDTSEDA ADKGEAPANK DAAIVEDTPM
0201: PSTKHRKSKR GSKTSAEKKK KDTSKDTADK GESQPEAEPA KEDDVNGDSS MPSVEVTDDT LSKQRKSKRV SKSAAESKKK DTSKDTADKG ESLPEAEPAK
0301: EDDVDEDSSM PSSGAADDTS SKGRKSRRAT RSSAKTKKND TSKDTDKTDS VTEPAKEVTE NEDSSMPSAE ATDDTVSKGR KSKKSKGSAK TKKRDADKNE
0401: SVPEPAKDVA ENEDSSMPSA EAIDGALSKE TNSKSSTRSA KKKKKKDAGK KESLPDPAKE GAENKDSSMP SGGATDGALS KETNSKISTR SAKKKKKESL
0501: PEPAKEKATG TGSSTPSRVA ADDTPSKKRK SSKKSSASNR IIDTSMDAVD GMLSERKSGR RLRSSHKIVE ALEVMKWPRK KDAGETTKVK DKDAALPKEN
0601: NLGRRAGSAR HKDKTTITKD GDGLRVSPLK KRLHLDVHSA TENAPFAVSE LGRKKKTLIE LLAETATPNP SAGGKSKARA ERPLPSSILK PEATPNTRGK
0701: RSLPASTETP EDPGRDKDTM NTREKRSVAS STEKPERDTR STVKTRGKSS LPSSAEEPED PDRDKNDTMK TRGKRSLPAS AEKRQDPDRG TKGTAKTRGK
0801: RSLPESTEDP DRVTKGSSKT KGKGSLPEST EEPEGPDDRD MKDSMHTRKR KKLDTLGDLS SQPQPVSPKG STKAREVKRK AAGQKSQASP VVKANGGISG
0901: DTSSKRSARR KAAEPKPQET PVVKANGEAS QTRSRRAKNS EVTVPDKSPR SVKLDKGKKG AVAEDSPSCG EMLSQLCVGA SDAEKMGKIA PASASFLTDF
1001: LKSARACTSD VEEAANTDCR ASSPDADEEI PEKAAADKVS SPNADEEMPE EAAADEISSP HAVEEIPEKA TDNVSSPHAD LEVPEEAADK VSSPHADDEV
1101: IPEEAAEKVS SPSADEAIPE EAAEKVSSPN ADEVMPEKAA DEVSSVPANE ATPEKAAEKV SSPNADEVIP EEAAEKAIPE EAADEVSLAP ADEETLLKVK
1201: EEVSSPLADE ETLEKATTEN VSSATADEET LETAAAEKVS SAPADEETSE TAATEKVSNA PAGEETLEKV KEEVSSPHAD EAIPEKAAEK VSSPHADEAT
1301: PEKAADEVSS PPADVETPEK ATEKVCCPPA DEEIAEKPSD KVSSPHAEAE MSEKAAKSSP APSEPPVVCD DMKDNYWSDI LINVEEPLSS LAKKKDKGKM
1401: RSSKKQRRDD EMKQDEMLLA EAENGKANGA EEDVSLTGLV LHFSKPGAVP SRGDLIEIFS QYGPVSEART ETDEHSSSAQ VVFRRRADAE AAFGGAGKIV
1501: ALRPGLDSFR LTDFPCATAA FRVEDGPKQG
001: MSTESERIES VSEANASSLE VGNDQMSEAL AGQAQELKTI GDDKEGCGNF ASAGDNGMEK VNGFTNLVKE TESVNGELDL GTRTENVGGE SNQSDKKVLV
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF36]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.