Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G117730.2 | Barley | nucleus, plastid | 29.14 | 25.16 |
| TraesCS1B01G077900.1 | Wheat | nucleus | 9.03 | 24.6 |
| TraesCS1B01G077800.1 | Wheat | cytosol | 8.17 | 22.5 |
| Bra028857.1-P | Field mustard | nucleus | 5.93 | 19.57 |
| CDY04873 | Canola | nucleus | 5.8 | 19.13 |
| CDY55692 | Canola | nucleus | 5.67 | 18.98 |
| TraesCS3D01G543800.1 | Wheat | nucleus | 18.98 | 18.82 |
| CDX73990 | Canola | nucleus | 6.99 | 18.31 |
| CDY07935 | Canola | nucleus | 6.66 | 17.88 |
| GSMUA_Achr10P... | Banana | nucleus | 7.65 | 16.36 |
| KRH32403 | Soybean | nucleus | 7.12 | 16.1 |
| AT5G02950.2 | Thale cress | nucleus | 6.39 | 15.35 |
| Bra001301.1-P | Field mustard | nucleus | 3.36 | 15.09 |
| GSMUA_Achr9P04320_001 | Banana | nucleus | 7.51 | 14.92 |
| TraesCS1B01G297600.1 | Wheat | nucleus | 6.99 | 14.3 |
| AT3G09670.1 | Thale cress | nucleus | 6.72 | 14.05 |
| GSMUA_Achr11P... | Banana | nucleus | 6.59 | 13.7 |
| TraesCS1B01G297800.1 | Wheat | nucleus | 10.61 | 13.46 |
| KRH19811 | Soybean | nucleus | 6.72 | 13.11 |
| PGSC0003DMT400087303 | Potato | nucleus | 6.59 | 12.97 |
| KRH34572 | Soybean | nucleus | 6.53 | 12.16 |
| KRH70385 | Soybean | nucleus | 7.91 | 11.82 |
| KRH33337 | Soybean | nucleus | 7.91 | 11.78 |
| VIT_08s0040g02440.t01 | Wine grape | nucleus | 6.86 | 11.71 |
| TraesCS3B01G603700.1 | Wheat | nucleus | 1.32 | 10.36 |
| TraesCS1B01G116700.1 | Wheat | plastid | 6.99 | 9.82 |
| Solyc04g049950.1.1 | Tomato | nucleus | 2.83 | 9.49 |
| KRG92228 | Soybean | nucleus | 8.77 | 7.62 |
| PGSC0003DMT400027409 | Potato | nucleus | 8.04 | 7.37 |
| Solyc09g007340.2.1 | Tomato | cytosol | 8.64 | 6.18 |
| VIT_13s0019g03620.t01 | Wine grape | nucleus | 7.45 | 6.02 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G603600.1 | EnsemblPlantsGene:TraesCS3B01G603600 | Gene3D:2.30.30.140 | InterPro:IPR000313 | InterPro:PWWP_dom | PANTHER:PTHR35491 |
| PANTHER:PTHR35491:SF3 | PFAM:PF00855 | PFscan:PS50812 | SEG:seg | SUPFAM:SSF63748 | TIGR:cd05162 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:822968033..822972687
Molecular Weight (calculated)
162492.0 Da
IEP (calculated)
5.346
GRAVY (calculated)
-1.020
Length
1517 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAQAPEGEG PAPARPSRIR VMRPEVEEVL KSPRRGRAKL HKEGGGEEDD AGARPRYDCA FQDEEGQQGF APPDVVWCKV RSHPWWPAQV FDAADASELA
0101: LRHARPGVPL VAYFWDRTFA WMDPPALRPF RAHFPRLAAQ STVSSYVASV DAALQEVTRR IEAGLSCTCS PPAVARKQQI HNSGIREGAY GAVVDEVYMR
0201: DTFRAKPFID YISALGRSPL AGADRLDLAT AMAQLRSFNR LRCPMELPEF VIYQGIEDVA AAVAPEAEAE ADADVAATSP QTKRKRTEEK GGDAPTKEEK
0301: KSRRRGESSS PKRDTAAKEP EVAIDVENST PMPMDRIMDT SEDAADKGEA PANKDADMVV EDTPPMPSTK QRKSKRGSKA SAEKKKKDTP KDTADKGESL
0401: PEAEPAKEDD VNEDSSMPSV EATDDTLSKQ RKSKRVSKSA AESKKKDASK DTADKGESLP EAEPAKQDDV DEDSSMPSSG AADDMSSKGS KSKRATRSSA
0501: KTKKNDTSKD TDKTDFVTEP AKEVAENEDS SMPSSEAADD TVSKGRKSKK SKGSAKTKKK DADKKESLPE PAKEVAENED SSMPSAEATD DTVSKGRKSK
0601: KSKGSAKTKQ KDADKNESLP EPAKEGAENE DSSMRSTRSA KKKKKDAGKE SLQEPAKEKA TGDGSSTPSR GAADDTPSKK RKSSKKSSAR NRIIDTSMDA
0701: MDGILSERKS GRRLRSSHKI VEALEVMKWP RKKDAGETTK VKDKDATLPK ENDLGRRAGS ARHKDKTTIT KDGDGLTVSP LKKRLHLDVL SATENPPFAV
0801: SELGRKKKTL IELLAETATP NPSAGGKSKA RAERPLPSSV LKPEATPNTR GKRSLPASTE TPEDPGRDKD TMKTREKRSV AASTEKPERD TRSTLKSRGK
0901: SSLPSSAEEP EDPDRDKNDT LKTRGKRSLP ASAEKPQDPD RGTKGTAKTR GKRSRPESTE DPDRVTKGTA KTKGTSSLPE STEEPEDPDN LVMKDTMYTR
1001: KRKKLDTLGD LSSQPQPVSP KSSTKSREVK RKAAGQKSQA SPVVKANVGI SGDMSSQPEP VSSKRSARRK AAEPKPQETP VVKANGEASQ TRSRRAKNSE
1101: VTVPDKPPRS VKPDKGKKGA VAEGSPSCGE MLSQLCVGAS DVEKMAKITP TSAGFLTDFL KSARACTSDV EEAANTDCDA SSPNADKEIP EKAAADKVSS
1201: PNADEEIPEK AAADKISSPH AVEKIPEKAT DNVSSPHADL EVPEEAADKV SSPHADDEVI PEEAAGKVSS PHADDEVIPE EAAEKVSSPN ADEVIPEKAA
1301: NEVSSVPADE AMIPEKAAEK VSSPNADEAI PEEAADKVSS PHADEAIPEK AADEVSLAPA DAETLLKVKE EVSSPLADEE TLEKATTEKV SSATADEETL
1401: ETAATEKVSS APADEETPET AATEKISDAP AGEETLEKVK EEVSSPLADE VIPEKTAEKV SSPPHADEAI PEKAADEVSS PPADVETPEK ATEKVSCPPA
1501: DKGIAEKPAD KVSSPHC
0101: LRHARPGVPL VAYFWDRTFA WMDPPALRPF RAHFPRLAAQ STVSSYVASV DAALQEVTRR IEAGLSCTCS PPAVARKQQI HNSGIREGAY GAVVDEVYMR
0201: DTFRAKPFID YISALGRSPL AGADRLDLAT AMAQLRSFNR LRCPMELPEF VIYQGIEDVA AAVAPEAEAE ADADVAATSP QTKRKRTEEK GGDAPTKEEK
0301: KSRRRGESSS PKRDTAAKEP EVAIDVENST PMPMDRIMDT SEDAADKGEA PANKDADMVV EDTPPMPSTK QRKSKRGSKA SAEKKKKDTP KDTADKGESL
0401: PEAEPAKEDD VNEDSSMPSV EATDDTLSKQ RKSKRVSKSA AESKKKDASK DTADKGESLP EAEPAKQDDV DEDSSMPSSG AADDMSSKGS KSKRATRSSA
0501: KTKKNDTSKD TDKTDFVTEP AKEVAENEDS SMPSSEAADD TVSKGRKSKK SKGSAKTKKK DADKKESLPE PAKEVAENED SSMPSAEATD DTVSKGRKSK
0601: KSKGSAKTKQ KDADKNESLP EPAKEGAENE DSSMRSTRSA KKKKKDAGKE SLQEPAKEKA TGDGSSTPSR GAADDTPSKK RKSSKKSSAR NRIIDTSMDA
0701: MDGILSERKS GRRLRSSHKI VEALEVMKWP RKKDAGETTK VKDKDATLPK ENDLGRRAGS ARHKDKTTIT KDGDGLTVSP LKKRLHLDVL SATENPPFAV
0801: SELGRKKKTL IELLAETATP NPSAGGKSKA RAERPLPSSV LKPEATPNTR GKRSLPASTE TPEDPGRDKD TMKTREKRSV AASTEKPERD TRSTLKSRGK
0901: SSLPSSAEEP EDPDRDKNDT LKTRGKRSLP ASAEKPQDPD RGTKGTAKTR GKRSRPESTE DPDRVTKGTA KTKGTSSLPE STEEPEDPDN LVMKDTMYTR
1001: KRKKLDTLGD LSSQPQPVSP KSSTKSREVK RKAAGQKSQA SPVVKANVGI SGDMSSQPEP VSSKRSARRK AAEPKPQETP VVKANGEASQ TRSRRAKNSE
1101: VTVPDKPPRS VKPDKGKKGA VAEGSPSCGE MLSQLCVGAS DVEKMAKITP TSAGFLTDFL KSARACTSDV EEAANTDCDA SSPNADKEIP EKAAADKVSS
1201: PNADEEIPEK AAADKISSPH AVEKIPEKAT DNVSSPHADL EVPEEAADKV SSPHADDEVI PEEAAGKVSS PHADDEVIPE EAAEKVSSPN ADEVIPEKAA
1301: NEVSSVPADE AMIPEKAAEK VSSPNADEAI PEEAADKVSS PHADEAIPEK AADEVSLAPA DAETLLKVKE EVSSPLADEE TLEKATTEKV SSATADEETL
1401: ETAATEKVSS APADEETPET AATEKISDAP AGEETLEKVK EEVSSPLADE VIPEKTAEKV SSPPHADEAI PEKAADEVSS PPADVETPEK ATEKVSCPPA
1501: DKGIAEKPAD KVSSPHC
001: MSTESERIES VSEANASSLE VGNDQMSEAL AGQAQELKTI GDDKEGCGNF ASAGDNGMEK VNGFTNLVKE TESVNGELDL GTRTENVGGE SNQSDKKVLV
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF36]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.