Factsheet for GSMUA_Achr10P03240_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55692	Canola	nucleus	15.23	23.84
Bra028857.1-P	Field mustard	nucleus	15.23	23.48
CDY04873	Canola	nucleus	15.23	23.48
GSMUA_Achr9P04320_001	Banana	nucleus	25.11	23.3
Os05t0122500-00	Rice	nucleus	16.36	22.01
CDY07935	Canola	nucleus	17.07	21.42
CDX73990	Canola	nucleus	16.93	20.73
KRH32403	Soybean	nucleus	19.32	20.42
TraesCS1D01G060800.1	Wheat	cytosol	15.51	20.15
AT5G02950.2	Thale cress	nucleus	17.77	19.94
GSMUA_Achr11P...	Banana	nucleus	20.45	19.86
Zm00001d010984_P001	Maize	plastid	14.1	19.57
EES18937	Sorghum	nucleus, plastid	13.96	19.57
TraesCS1A01G059600.1	Wheat	cytosol	15.09	19.56
TraesCS1D01G060900.1	Wheat	nucleus	14.95	19.49
TraesCS1B01G077800.1	Wheat	cytosol	14.81	19.06
PGSC0003DMT400087303	Potato	nucleus	20.45	18.81
TraesCS1B01G077900.1	Wheat	nucleus	14.67	18.67
GSMUA_Achr8P02720_001	Banana	nucleus	21.02	17.72
AT3G09670.1	Thale cress	nucleus	17.91	17.49
KRH19811	Soybean	nucleus	19.18	17.48
Zm00001d041940_P001	Maize	nucleus	20.45	17.12
Zm00001d011770_P001	Maize	nucleus	21.44	17.1
KRH70385	Soybean	nucleus	24.4	17.04
Bra001301.1-P	Field mustard	nucleus	8.04	16.86
VIT_08s0040g02440.t01	Wine grape	nucleus	21.02	16.78
KXG34235	Sorghum	nucleus	20.45	16.24
KRH34572	Soybean	nucleus	18.48	16.09
TraesCS1A01G059700.1	Wheat	cytosol	8.32	15.86
KRH33337	Soybean	nucleus	22.57	15.7
HORVU1Hr1G012320.1	Barley	cytosol, nucleus	7.62	14.36
Solyc04g049950.1.1	Tomato	nucleus	9.17	14.35
HORVU1Hr1G012310.1	Barley	cytosol, nucleus	6.91	12.93
Os11t0303500-01	Rice	nucleus	12.13	11.88
GSMUA_Achr8P06730_001	Banana	nucleus	14.81	10.32
GSMUA_Achr5P29300_001	Banana	nucleus	22.99	10.3
PGSC0003DMT400027409	Potato	nucleus	22.85	9.78
GSMUA_Achr3P23960_001	Banana	nucleus	13.82	9.56
VIT_13s0019g03620.t01	Wine grape	nucleus	24.96	9.43
HORVU3Hr1G117740.2	Barley	nucleus	2.54	9.38
TraesCS3B01G603600.1	Wheat	nucleus	16.36	7.65
KRG92228	Soybean	nucleus	18.62	7.56
HORVU3Hr1G117730.2	Barley	nucleus, plastid	18.48	7.46
Solyc09g007340.2.1	Tomato	cytosol	20.31	6.8
TraesCS3D01G543800.1	Wheat	nucleus	11.99	5.56
TraesCS3B01G603700.1	Wheat	nucleus	1.41	5.18

Protein Annotations

EnsemblPlants:GSMUA_Achr10P03240_001	EnsemblPlants:GSMUA_Achr10T03240_001	EnsemblPlantsGene:GSMUA_Achr10G03240_001	Gene3D:2.30.30.140	InterPro:IPR000313	InterPro:PWWP_dom
PANTHER:PTHR42851	PANTHER:PTHR42851:SF4	PFAM:PF00855	PFscan:PS50812	SEG:seg	SMART:SM00293
SUPFAM:SSF63748	UniParc:UPI000294F7BB	UniProt:M0RF01	MapMan:35.2	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G03240_001]

Coordinates

chr10:-:10874358..10876487

Molecular Weight (calculated)

78094.0 Da

IEP (calculated)

5.416

GRAVY (calculated)

-0.563

Length

709 amino acids

Sequence
(BLAST)

001: MASNPSEDYA GGVFYPSSSF SAAVAPPEPG KSRPETLTTT VEVAIDLEDG ATSEAEKDAA YSMAIEVTVV GSENRGFVAT VDAGAAHEKT RESAEIGLVD
101: VKTVDEGHIS TAEVGVEADA GGVGDQNVQV QRQEPSERRK RGRPRRSTVE NVQHARYLQS FQDEQKDGFA VSDLVWGKVR SHPWWPGQIF DAADASDMAL
201: GAQKEGHFLV VYFGDKTFAW CDESHLKPFQ MYFTRLEKQD SSDVFGTAVN EALGEVSRLL ELGMACNCSG DEAYAVVKNR KVENAGVREG TCSSDVDKFW
301: IVNSFEPRKI IDYVRMLGIF PCNGADSLDL VIAKAQLKAF CHSDRYLELS AFVLGQGIEN AGESSASGER NRGNDFDLSI PVSSDSSSQK DQLSSRRATS
401: AKKKHVSENG RKKKSLSELM DEKSFSHSTD GCRSGSGVRD CVHTLGSRQA DASSHPGFSG KSKMKKLDTL GDLTTQSLYC DKPLKIRERI GRVERKRTQS
501: PAMIKKSPSG LGHRRSAVPD ETNLRLVNPR VKGDDLKDFT PYEMLSQLCL AAISPLKTYS FLNTTVSFFT EFSNWIVFSS DDNTLSEIFG GKQRRRKLSY
601: FETATLDLAT PDYIQDSYWS DIIVCSNFDE EHGSEGQKRK SESQVKRQKK RKKPKEQPEL FIPSGSVPEA EQYLQIGSAS AGIVHELETE SPLDSLEEDV
701: YGCISINQV

Best Arabidopsis Sequence Match ( AT3G09670.1 )
(BLAST)

001: MSTESERIES VSEANASSLE VGNDQMSEAL AGQAQELKTI GDDKEGCGNF ASAGDNGMEK VNGFTNLVKE TESVNGELDL GTRTENVGGE SNQSDKKVLV
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE

Arabidopsis Description

Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF36]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.