Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P06730_001 | Banana | nucleus | 57.56 | 58.01 |
| PGSC0003DMT400063505 | Potato | nucleus | 12.98 | 35.37 |
| Zm00001d024841_P001 | Maize | nucleus | 25.56 | 30.82 |
| Os05t0149200-01 | Rice | plastid | 10.83 | 29.68 |
| KRG92886 | Soybean | nucleus | 30.34 | 29.45 |
| KRH33902 | Soybean | nucleus | 29.66 | 29.09 |
| KRG96822 | Soybean | nucleus | 29.85 | 28.47 |
| CDX99976 | Canola | nucleus | 25.95 | 28.42 |
| OQU77406 | Sorghum | nucleus | 27.12 | 27.04 |
| Solyc01g099360.2.1 | Tomato | nucleus | 26.44 | 26.91 |
| CDY19729 | Canola | nucleus | 26.54 | 26.51 |
| Bra036620.1-P | Field mustard | nucleus | 26.63 | 26.5 |
| AT5G27650.1 | Thale cress | nucleus | 27.51 | 26.31 |
| Zm00001d010869_P001 | Maize | nucleus | 24.88 | 25.89 |
| VIT_14s0060g02400.t01 | Wine grape | nucleus | 31.41 | 25.74 |
| AT3G05430.1 | Thale cress | nucleus | 23.51 | 24.97 |
| TraesCS1A01G089100.1 | Wheat | plastid | 26.24 | 24.79 |
| TraesCS1B01G116700.1 | Wheat | plastid | 26.05 | 24.75 |
| TraesCS1D01G097400.1 | Wheat | plastid | 24.2 | 23.8 |
| HORVU1Hr1G020500.2 | Barley | nucleus, plastid | 25.27 | 23.78 |
| GSMUA_Achr9P04320_001 | Banana | nucleus | 10.54 | 14.14 |
| GSMUA_Achr10P... | Banana | nucleus | 9.56 | 13.82 |
| GSMUA_Achr8P02720_001 | Banana | nucleus | 9.56 | 11.65 |
| GSMUA_Achr11P... | Banana | nucleus | 8.1 | 11.37 |
| GSMUA_Achr5P29300_001 | Banana | nucleus | 12.49 | 8.09 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P23960_001 | EnsemblPlants:GSMUA_Achr3T23960_001 | EnsemblPlantsGene:GSMUA_Achr3G23960_001 | Gene3D:2.30.30.140 | InterPro:IPR000313 | InterPro:PWWP_dom |
| PANTHER:PTHR10688 | PANTHER:PTHR10688:SF1 | PFAM:PF00855 | PFscan:PS50812 | SEG:seg | SMART:SM00293 |
| SUPFAM:SSF63748 | UniParc:UPI00029634C3 | UniProt:M0SHB2 | MapMan:35.2 | : | : |
Description
Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G23960_001]
Coordinates
chr3:+:24650607..24658743
Molecular Weight (calculated)
110383.0 Da
IEP (calculated)
8.874
GRAVY (calculated)
-0.523
Length
1025 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSEREIDRGS AAASFGMGNP QEGPAGDEAA ADGVGRGSRE SRVPMELDPV ERKIEVDSMV LERGEADLSR SPKDAPGGED AAMDEARVPE SDVAEGVSAS
0101: AGAGAMLVMA DPEGGSDFDE GLLSDEVSVS NGATILQGAV GNWMNGFELG DMVWGKVKSH PWWPGHIFNE AFASASVRRT KKEGHFLVAF FGDSSYGWFE
0201: PAELVPFDPH YEEKSKQTTL RPFVKAVEEA VDEASRREAL ALTCYCRNPF NFQPARVPGY FYVDVPGFEL GGIYSLKQVN SARDKFVPGM ALSFLQQTAT
0301: SPLADDPACI DRMRNVAMML AYRRAVFEEF DETYAQAFGV EPVRPSRRTG AMPDQLERFA PRAAPLSGPL VLPEPLRHKK SSSHKLVHKA AKVPSAKKNK
0401: YVLKRRDERE PASASVGPPK PSLPDDASCP PGSAPGGSNL GDYVLQKRAP AGAADEKPPP QTSQDGSVSE QTALPAAADA PAVRQVFDEG RLKTEPPRQL
0501: SEIAHRKLDP TVSGAAYSSA DAKPGYGPGS LALRPSQVGG IMKEKKIKKR LREDGSSAES GVTGQAKKKK KKKKVQSSEI GVPDHVKAST IEDLYRRSAA
0601: AKPVSMEPEL PRREDEVAPT TEPSAVAVRH PDIDLSLRDL QLPELVSDLQ ELALYPFYGI DRDAPWVALH VFLNFRSLVY QKSLGLPPAS EADAPETAPT
0701: SISKPPKASF RPDDPTVAGR KRTASDRQEE MSAKRQKKLD KLKALADPVA ATTSAAASAG PAKPNDRAAE PVKKQEPPPP PPRLPSPTTL VMKFPLRTTL
0801: PSVASLKAKF ARFGPLELSG TRVYWKSYTC KVVYKFKPDA EAALNHARSN QMFGQVKVYY YIRDADALVP EPSSDAVGQR SESRLAESNQ LRPGSGAGVG
0901: VSFGPSRPPL NLTQKPAGQP KSILKKPSDE AAPSGGGREA PRVKFMLDTV DGKAELPATV VVAGNNNDVR SSADTSSAVD PVIGKAPRGN ANKAFADQML
1001: SLLFRCRDIV RNVKSSIGYV PYHQL
0101: AGAGAMLVMA DPEGGSDFDE GLLSDEVSVS NGATILQGAV GNWMNGFELG DMVWGKVKSH PWWPGHIFNE AFASASVRRT KKEGHFLVAF FGDSSYGWFE
0201: PAELVPFDPH YEEKSKQTTL RPFVKAVEEA VDEASRREAL ALTCYCRNPF NFQPARVPGY FYVDVPGFEL GGIYSLKQVN SARDKFVPGM ALSFLQQTAT
0301: SPLADDPACI DRMRNVAMML AYRRAVFEEF DETYAQAFGV EPVRPSRRTG AMPDQLERFA PRAAPLSGPL VLPEPLRHKK SSSHKLVHKA AKVPSAKKNK
0401: YVLKRRDERE PASASVGPPK PSLPDDASCP PGSAPGGSNL GDYVLQKRAP AGAADEKPPP QTSQDGSVSE QTALPAAADA PAVRQVFDEG RLKTEPPRQL
0501: SEIAHRKLDP TVSGAAYSSA DAKPGYGPGS LALRPSQVGG IMKEKKIKKR LREDGSSAES GVTGQAKKKK KKKKVQSSEI GVPDHVKAST IEDLYRRSAA
0601: AKPVSMEPEL PRREDEVAPT TEPSAVAVRH PDIDLSLRDL QLPELVSDLQ ELALYPFYGI DRDAPWVALH VFLNFRSLVY QKSLGLPPAS EADAPETAPT
0701: SISKPPKASF RPDDPTVAGR KRTASDRQEE MSAKRQKKLD KLKALADPVA ATTSAAASAG PAKPNDRAAE PVKKQEPPPP PPRLPSPTTL VMKFPLRTTL
0801: PSVASLKAKF ARFGPLELSG TRVYWKSYTC KVVYKFKPDA EAALNHARSN QMFGQVKVYY YIRDADALVP EPSSDAVGQR SESRLAESNQ LRPGSGAGVG
0901: VSFGPSRPPL NLTQKPAGQP KSILKKPSDE AAPSGGGREA PRVKFMLDTV DGKAELPATV VVAGNNNDVR SSADTSSAVD PVIGKAPRGN ANKAFADQML
1001: SLLFRCRDIV RNVKSSIGYV PYHQL
0001: MYKTKLIPVM NEDAVIVQQT DSIQDPKVTP DDTVVDSSGD VHEAIDDDVE ASSPMELDSA VTNDARVLES ERSEKDGVVG SEEEDEIKSE DVLIDKDDES
0101: SEVKEEEEEE DGSDDQSSEL GSEADEKELD LGLKEEKKGV SDYKSLLSEF DDYVASEKMG SGVSRALSYG FEVGDLVWGK VKSHPWWPGH IFNEAFASPS
0201: VRRMRRIDHV LVAFFGDSSY GWFDPAELIP FEPNLEEKSQ QTVSKHFVRA VEEAKDEASR RSALGLTCKC RNPYNFRPSN VEDYFAVDVP DYELQAVYSV
0301: DQIKNSRDKF LPAETISFVK QLALAPQECD PDSLKFMKKK AVVFAFRKSV FEEFDETYAQ AFGTKSPRSS VSTLEPHNRA PPRAPLSGPL VIAETLGDLK
0401: SSKKPTKVKV SKKKDKYLLK RRDEAGDKSV QFGEIEASSE ASHIQGIDGS LDGDFGLQRR APTLQTPMKD EKSGIVSMDF ASSNTAIPGK EFSASKPSLD
0501: EEKGLAEKSK ERMEERAAVL PEHGKSEAMA SLKPKEEAGT DLGSAGSSLQ PLLESHTSAS EGKSSTGSVI KKVKVAKRSS SEMSSENPPS EPKKKKKKKK
0601: EPDSDHPVKR KNLYSGEAGA KKLSQLGSAH LQTYMEADVP QLLSHLQDLS LDPFHGLSVA SFGTARKFFL RFRSLNYQKS LSVSSSDATV ENARDTKPSK
0701: PVKTVKRTED PSKAGKKRLS SDRQDEIPSA KKLKKTNQLK SMASEKKIIR EAKDSIKPIR EPSRVVQAKP ARGQTGKKTA PSVKVVEPTM LVMKFPPGTS
0801: LPSAALLKAR FGRFGLLDQS AIRVFWKSST CRVVFLYKAD AQTAFRYATG NNTLFGNVNV KYFLRDVDAP KAEPREPENT KEDDEPQSQW LDQAPPLHQP
0901: TLPPPNVNLK SCLKKPVDDP SSSSNNGNGN RAAVRVKFML GGEENSSKAN TEPPQVTMTL NRNSGPSSSS SSVPMEFVSK KFQNVVHHQQ LPPSTLPPIL
1001: PLPPQYTKPQ QLPIKPVDHV EPPMPPSRNF RGPIPAVSAG DISHQMLNLL SKCNEVVANV TGLLGYVPYH PL
0101: SEVKEEEEEE DGSDDQSSEL GSEADEKELD LGLKEEKKGV SDYKSLLSEF DDYVASEKMG SGVSRALSYG FEVGDLVWGK VKSHPWWPGH IFNEAFASPS
0201: VRRMRRIDHV LVAFFGDSSY GWFDPAELIP FEPNLEEKSQ QTVSKHFVRA VEEAKDEASR RSALGLTCKC RNPYNFRPSN VEDYFAVDVP DYELQAVYSV
0301: DQIKNSRDKF LPAETISFVK QLALAPQECD PDSLKFMKKK AVVFAFRKSV FEEFDETYAQ AFGTKSPRSS VSTLEPHNRA PPRAPLSGPL VIAETLGDLK
0401: SSKKPTKVKV SKKKDKYLLK RRDEAGDKSV QFGEIEASSE ASHIQGIDGS LDGDFGLQRR APTLQTPMKD EKSGIVSMDF ASSNTAIPGK EFSASKPSLD
0501: EEKGLAEKSK ERMEERAAVL PEHGKSEAMA SLKPKEEAGT DLGSAGSSLQ PLLESHTSAS EGKSSTGSVI KKVKVAKRSS SEMSSENPPS EPKKKKKKKK
0601: EPDSDHPVKR KNLYSGEAGA KKLSQLGSAH LQTYMEADVP QLLSHLQDLS LDPFHGLSVA SFGTARKFFL RFRSLNYQKS LSVSSSDATV ENARDTKPSK
0701: PVKTVKRTED PSKAGKKRLS SDRQDEIPSA KKLKKTNQLK SMASEKKIIR EAKDSIKPIR EPSRVVQAKP ARGQTGKKTA PSVKVVEPTM LVMKFPPGTS
0801: LPSAALLKAR FGRFGLLDQS AIRVFWKSST CRVVFLYKAD AQTAFRYATG NNTLFGNVNV KYFLRDVDAP KAEPREPENT KEDDEPQSQW LDQAPPLHQP
0901: TLPPPNVNLK SCLKKPVDDP SSSSNNGNGN RAAVRVKFML GGEENSSKAN TEPPQVTMTL NRNSGPSSSS SSVPMEFVSK KFQNVVHHQQ LPPSTLPPIL
1001: PLPPQYTKPQ QLPIKPVDHV EPPMPPSRNF RGPIPAVSAG DISHQMLNLL SKCNEVVANV TGLLGYVPYH PL
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K4D6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.