Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036620.1-P | Field mustard | nucleus | 90.74 | 90.39 |
| CDX99976 | Canola | nucleus | 64.13 | 70.3 |
| AT5G27650.1 | Thale cress | nucleus | 45.42 | 43.47 |
| AT3G05430.1 | Thale cress | nucleus | 34.99 | 37.2 |
| PGSC0003DMT400063505 | Potato | nucleus | 13.35 | 36.44 |
| KRH33902 | Soybean | nucleus | 31.09 | 30.53 |
| KRG92886 | Soybean | nucleus | 31.19 | 30.3 |
| KRG96822 | Soybean | nucleus | 31.48 | 30.05 |
| Solyc01g099360.2.1 | Tomato | nucleus | 29.04 | 29.59 |
| GSMUA_Achr8P06730_001 | Banana | nucleus | 28.07 | 28.32 |
| GSMUA_Achr3P23960_001 | Banana | nucleus | 26.51 | 26.54 |
| Zm00001d024841_P001 | Maize | nucleus | 21.73 | 26.24 |
| Os05t0149200-01 | Rice | plastid | 9.36 | 25.67 |
| VIT_14s0060g02400.t01 | Wine grape | nucleus | 30.6 | 25.1 |
| CDX67453 | Canola | cytosol, nucleus, plastid | 6.73 | 24.47 |
| CDY04873 | Canola | nucleus | 10.33 | 23.04 |
| CDY11682 | Canola | cytosol, nucleus, plastid | 5.56 | 22.35 |
| CDY55692 | Canola | nucleus | 9.75 | 22.08 |
| Zm00001d010869_P001 | Maize | nucleus | 20.96 | 21.83 |
| OQU77406 | Sorghum | nucleus | 20.76 | 20.72 |
| TraesCS1A01G089100.1 | Wheat | plastid | 20.18 | 19.08 |
| HORVU1Hr1G020500.2 | Barley | nucleus, plastid | 20.18 | 19.01 |
| TraesCS1B01G116700.1 | Wheat | plastid | 19.88 | 18.91 |
| TraesCS1D01G097400.1 | Wheat | plastid | 18.71 | 18.43 |
| CDX73990 | Canola | nucleus | 9.75 | 17.27 |
| CDY07935 | Canola | nucleus | 9.26 | 16.81 |
| CDX86465 | Canola | nucleus | 8.19 | 15.88 |
| CDY44440 | Canola | plastid | 8.38 | 14.73 |
| CDX67452 | Canola | nucleus | 6.43 | 13.23 |
| CDY11681 | Canola | nucleus | 6.14 | 12.63 |
| CDY39560 | Canola | nucleus | 6.14 | 7.47 |
| CDY48152 | Canola | nucleus | 6.04 | 6.97 |
Protein Annotations
| EnsemblPlants:CDY19729 | EnsemblPlantsGene:GSBRNA2T00009465001 | Gene3D:2.30.30.140 | InterPro:IPR000313 | InterPro:PWWP_dom | PANTHER:PTHR10688 |
| PANTHER:PTHR10688:SF1 | PFAM:PF00855 | PFscan:PS50812 | ProteinID:CDY19729 | ProteinID:CDY19729.1 | SEG:seg |
| SMART:SM00293 | SUPFAM:SSF63748 | UniParc:UPI0004EE73CF | UniProt:A0A078G2T1 | MapMan:35.2 | : |
Description
BnaA09g03820DBnaA09g03820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G2T1]
Coordinates
chrLK032100:+:117086..120539
Molecular Weight (calculated)
111745.0 Da
IEP (calculated)
6.401
GRAVY (calculated)
-0.698
Length
1026 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDEADAEIPQ QSNPIESPEA IPPLSADADL TLDAAASSSS PTELDSSLTN DDGGARVSES ERSENADLIA PNEEEEEDDV SETENVIEKS SDDDQSEADD
0101: VAFDEEKRGA LEKPAVTDYK SLLSEFDDYV ASEKMGSGVS RALSYGFQVG DLVWGKVKSH PWWPGHIFNE AFASPSVRRM RRVDHVLVAF FGDSSYGWFD
0201: PAELIPFEPH LSDKAHQTAA KHFVRAVEEA VDEASRRSAL GLTCKCRNPY NFRATSVQDY FTVDVPDYEV QGVYSGEQIM KARDEFSPVE ALSFVKELAL
0301: APQECDDVEE SLSFLKKKAV VCAFRNAVFE EFDETYSQAF GTKSMRTSVT SNESSNRTPS RAPLSGPLVI AETLGVPKSS KTPTKVKDSK KQDKYLLKRR
0401: DEAGHKTVPF GQAEASSSTG VGGSSDGDSV LLRRASTLQS PMKDEQTGIV STDSNSSSAA IPGKESSVPK ISFDEEKDVA EESAEKKEER SVVNPEHEPL
0501: KQETGPDSGS AGSSLQPMIE SPRGSHTSAS DGKSSTGSLI KKLKVAKRSS SEMGTSENPP SEPVKKKKKM KEPNPNLPRK RKHPLSSGEP GAKKLSQLGS
0601: AHLHTYMDAD VPKLLGHLQD LSLDPFSGST VVSFGAARKF FLRFRSLNYQ KSLSVPSSDA NARDTNLSKP GKSVNRTEDP SKAGKKRLSS DRQDEIPLVK
0701: KLKKTNQLKP MASEKKIKLE AKDSVKPARE QSGAVQARPS KLQTAKKPAP SAKVVEPTML VMKFPPGTSL PSPALLKARF GRFGLLDQSA IRVFWKSSTC
0801: RVVFLYKADA QTAFRYATGN NSLFGNVNVR YFLRDVDAPK AEPQEPENAK EDDEQPQSQM PDQASPRHQP KLPPPLKSNL KSCLKKLGDD TSSNRPRVKF
0901: MLDGEENSSK ATNEPPNRND GPSSSSSSSF GMEFVSKKFQ NVQLPPSTLP PILPLPPQYS KPIKTVDHVE PPMPPPPPPP SRSFPGPSAA VGAGDISHQM
1001: LNLLSKCNDV VANVTGLLGY VPYHPL
0101: VAFDEEKRGA LEKPAVTDYK SLLSEFDDYV ASEKMGSGVS RALSYGFQVG DLVWGKVKSH PWWPGHIFNE AFASPSVRRM RRVDHVLVAF FGDSSYGWFD
0201: PAELIPFEPH LSDKAHQTAA KHFVRAVEEA VDEASRRSAL GLTCKCRNPY NFRATSVQDY FTVDVPDYEV QGVYSGEQIM KARDEFSPVE ALSFVKELAL
0301: APQECDDVEE SLSFLKKKAV VCAFRNAVFE EFDETYSQAF GTKSMRTSVT SNESSNRTPS RAPLSGPLVI AETLGVPKSS KTPTKVKDSK KQDKYLLKRR
0401: DEAGHKTVPF GQAEASSSTG VGGSSDGDSV LLRRASTLQS PMKDEQTGIV STDSNSSSAA IPGKESSVPK ISFDEEKDVA EESAEKKEER SVVNPEHEPL
0501: KQETGPDSGS AGSSLQPMIE SPRGSHTSAS DGKSSTGSLI KKLKVAKRSS SEMGTSENPP SEPVKKKKKM KEPNPNLPRK RKHPLSSGEP GAKKLSQLGS
0601: AHLHTYMDAD VPKLLGHLQD LSLDPFSGST VVSFGAARKF FLRFRSLNYQ KSLSVPSSDA NARDTNLSKP GKSVNRTEDP SKAGKKRLSS DRQDEIPLVK
0701: KLKKTNQLKP MASEKKIKLE AKDSVKPARE QSGAVQARPS KLQTAKKPAP SAKVVEPTML VMKFPPGTSL PSPALLKARF GRFGLLDQSA IRVFWKSSTC
0801: RVVFLYKADA QTAFRYATGN NSLFGNVNVR YFLRDVDAPK AEPQEPENAK EDDEQPQSQM PDQASPRHQP KLPPPLKSNL KSCLKKLGDD TSSNRPRVKF
0901: MLDGEENSSK ATNEPPNRND GPSSSSSSSF GMEFVSKKFQ NVQLPPSTLP PILPLPPQYS KPIKTVDHVE PPMPPPPPPP SRSFPGPSAA VGAGDISHQM
1001: LNLLSKCNDV VANVTGLLGY VPYHPL
0001: MYKTKLIPVM NEDAVIVQQT DSIQDPKVTP DDTVVDSSGD VHEAIDDDVE ASSPMELDSA VTNDARVLES ERSEKDGVVG SEEEDEIKSE DVLIDKDDES
0101: SEVKEEEEEE DGSDDQSSEL GSEADEKELD LGLKEEKKGV SDYKSLLSEF DDYVASEKMG SGVSRALSYG FEVGDLVWGK VKSHPWWPGH IFNEAFASPS
0201: VRRMRRIDHV LVAFFGDSSY GWFDPAELIP FEPNLEEKSQ QTVSKHFVRA VEEAKDEASR RSALGLTCKC RNPYNFRPSN VEDYFAVDVP DYELQAVYSV
0301: DQIKNSRDKF LPAETISFVK QLALAPQECD PDSLKFMKKK AVVFAFRKSV FEEFDETYAQ AFGTKSPRSS VSTLEPHNRA PPRAPLSGPL VIAETLGDLK
0401: SSKKPTKVKV SKKKDKYLLK RRDEAGDKSV QFGEIEASSE ASHIQGIDGS LDGDFGLQRR APTLQTPMKD EKSGIVSMDF ASSNTAIPGK EFSASKPSLD
0501: EEKGLAEKSK ERMEERAAVL PEHGKSEAMA SLKPKEEAGT DLGSAGSSLQ PLLESHTSAS EGKSSTGSVI KKVKVAKRSS SEMSSENPPS EPKKKKKKKK
0601: EPDSDHPVKR KNLYSGEAGA KKLSQLGSAH LQTYMEADVP QLLSHLQDLS LDPFHGLSVA SFGTARKFFL RFRSLNYQKS LSVSSSDATV ENARDTKPSK
0701: PVKTVKRTED PSKAGKKRLS SDRQDEIPSA KKLKKTNQLK SMASEKKIIR EAKDSIKPIR EPSRVVQAKP ARGQTGKKTA PSVKVVEPTM LVMKFPPGTS
0801: LPSAALLKAR FGRFGLLDQS AIRVFWKSST CRVVFLYKAD AQTAFRYATG NNTLFGNVNV KYFLRDVDAP KAEPREPENT KEDDEPQSQW LDQAPPLHQP
0901: TLPPPNVNLK SCLKKPVDDP SSSSNNGNGN RAAVRVKFML GGEENSSKAN TEPPQVTMTL NRNSGPSSSS SSVPMEFVSK KFQNVVHHQQ LPPSTLPPIL
1001: PLPPQYTKPQ QLPIKPVDHV EPPMPPSRNF RGPIPAVSAG DISHQMLNLL SKCNEVVANV TGLLGYVPYH PL
0101: SEVKEEEEEE DGSDDQSSEL GSEADEKELD LGLKEEKKGV SDYKSLLSEF DDYVASEKMG SGVSRALSYG FEVGDLVWGK VKSHPWWPGH IFNEAFASPS
0201: VRRMRRIDHV LVAFFGDSSY GWFDPAELIP FEPNLEEKSQ QTVSKHFVRA VEEAKDEASR RSALGLTCKC RNPYNFRPSN VEDYFAVDVP DYELQAVYSV
0301: DQIKNSRDKF LPAETISFVK QLALAPQECD PDSLKFMKKK AVVFAFRKSV FEEFDETYAQ AFGTKSPRSS VSTLEPHNRA PPRAPLSGPL VIAETLGDLK
0401: SSKKPTKVKV SKKKDKYLLK RRDEAGDKSV QFGEIEASSE ASHIQGIDGS LDGDFGLQRR APTLQTPMKD EKSGIVSMDF ASSNTAIPGK EFSASKPSLD
0501: EEKGLAEKSK ERMEERAAVL PEHGKSEAMA SLKPKEEAGT DLGSAGSSLQ PLLESHTSAS EGKSSTGSVI KKVKVAKRSS SEMSSENPPS EPKKKKKKKK
0601: EPDSDHPVKR KNLYSGEAGA KKLSQLGSAH LQTYMEADVP QLLSHLQDLS LDPFHGLSVA SFGTARKFFL RFRSLNYQKS LSVSSSDATV ENARDTKPSK
0701: PVKTVKRTED PSKAGKKRLS SDRQDEIPSA KKLKKTNQLK SMASEKKIIR EAKDSIKPIR EPSRVVQAKP ARGQTGKKTA PSVKVVEPTM LVMKFPPGTS
0801: LPSAALLKAR FGRFGLLDQS AIRVFWKSST CRVVFLYKAD AQTAFRYATG NNTLFGNVNV KYFLRDVDAP KAEPREPENT KEDDEPQSQW LDQAPPLHQP
0901: TLPPPNVNLK SCLKKPVDDP SSSSNNGNGN RAAVRVKFML GGEENSSKAN TEPPQVTMTL NRNSGPSSSS SSVPMEFVSK KFQNVVHHQQ LPPSTLPPIL
1001: PLPPQYTKPQ QLPIKPVDHV EPPMPPSRNF RGPIPAVSAG DISHQMLNLL SKCNEVVANV TGLLGYVPYH PL
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K4D6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.