Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400063505 | Potato | nucleus | 11.51 | 38.3 |
| KRG92886 | Soybean | nucleus | 30.06 | 35.61 |
| KRG96822 | Soybean | nucleus | 30.54 | 35.53 |
| KRH33902 | Soybean | nucleus | 29.58 | 35.41 |
| CDX99976 | Canola | nucleus | 24.46 | 32.69 |
| Solyc01g099360.2.1 | Tomato | nucleus | 26.14 | 32.47 |
| GSMUA_Achr8P06730_001 | Banana | nucleus | 25.74 | 31.66 |
| GSMUA_Achr3P23960_001 | Banana | nucleus | 25.74 | 31.41 |
| Bra036620.1-P | Field mustard | nucleus | 25.74 | 31.26 |
| AT5G27650.1 | Thale cress | nucleus | 26.78 | 31.25 |
| CDY19729 | Canola | nucleus | 25.1 | 30.6 |
| AT3G05430.1 | Thale cress | nucleus | 22.94 | 29.74 |
| Zm00001d024841_P001 | Maize | nucleus | 19.5 | 28.71 |
| Os05t0149200-01 | Rice | plastid | 8.23 | 27.54 |
| Zm00001d010869_P001 | Maize | nucleus | 20.38 | 25.89 |
| OQU77406 | Sorghum | nucleus | 20.86 | 25.39 |
| TraesCS1A01G089100.1 | Wheat | plastid | 19.82 | 22.86 |
| TraesCS1B01G116700.1 | Wheat | plastid | 19.66 | 22.8 |
| HORVU1Hr1G020500.2 | Barley | nucleus, plastid | 19.74 | 22.68 |
| TraesCS1D01G097400.1 | Wheat | plastid | 18.63 | 22.36 |
| VIT_14s0066g01120.t01 | Wine grape | nucleus | 12.63 | 16.24 |
| VIT_08s0040g02440.t01 | Wine grape | nucleus | 10.55 | 14.86 |
| VIT_13s0019g03620.t01 | Wine grape | nucleus | 10.95 | 7.3 |
| VIT_17s0000g08510.t01 | Wine grape | nucleus | 3.36 | 3.4 |
Protein Annotations
| EntrezGene:100259614 | wikigene:100259614 | Gene3D:2.30.30.140 | MapMan:35.2 | EMBL:AM459234 | ProteinID:CAN76878 |
| ProteinID:CAN76878.1 | ProteinID:CCB61848 | ProteinID:CCB61848.1 | UniProt:F6I4L1 | EMBL:FN596746 | InterPro:IPR000313 |
| EntrezGene:LOC100259614 | wikigene:LOC100259614 | PFAM:PF00855 | PFscan:PS50812 | PANTHER:PTHR10688 | PANTHER:PTHR10688:SF1 |
| InterPro:PWWP_dom | SMART:SM00293 | SUPFAM:SSF63748 | UniParc:UPI000210892D | ArrayExpress:VIT_14s0060g02400 | EnsemblPlantsGene:VIT_14s0060g02400 |
| EnsemblPlants:VIT_14s0060g02400.t01 | unigene:Vvi.19935 | RefSeq:XP_002279695 | RefSeq:XP_002279695.2 | RefSeq:XP_010659628.1 | RefSeq:XP_010659629.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr14:-:2019722..2027984
Molecular Weight (calculated)
136599.0 Da
IEP (calculated)
8.733
GRAVY (calculated)
-0.719
Length
1251 amino acids
Sequence
(BLAST)
(BLAST)
0001: MISVMNNECE FATKSDAVEE PPTTTRVSED AVDRSGRGTD GEGVGGGGSC MNFGVSDRIG GSPERRLGAV ESEGNVRVSE DEVSGGVEFE NGRSDGVGAS
0101: LEDDSGGVDR EIESRVSSDS GCRKIVDQEM GTEVSEIKDG EGAPREGVDQ FDSRSDRKED ALPRVDAHEL EGGSVSQYES LLSKFDDYVA NGMGGAYGMG
0201: TSRASSHALE VGEMVWGKVK SHPWWPGHIF NEALADPLVR RTKREGHVLV AFFGDSSYGW FLPDELVPFD TNFAEKSRQT TAKTFLKAVE EAVDEVGRRC
0301: GLRVVCQCRN PYTFRPKRVP GYFEVDVPDY ETGGIYSADQ ISNARESFQP EDTLSFVKQL ALAPRDSDQK NIRWIKNKAT VYAYRRAIYE EYDETYAQAF
0401: GVQTSRPSHA QLNANRHLYK EPPRAPLSGP LVIAEALGSR KGSTKNLKGK MKKERYLFKR REEPVDFRPH QFNKGQASSS SSLGQTSATI SPGQATASIN
0501: QGQASSSSTC EEGPSTFATG DYVFQKRAPS ASSQVNATKV ESPADFGVTH MDQAPAHSTH DKKDAIWESK DTIVSDVAAG PANMGGSDMV RRGVFSEEID
0601: VVPPPLQQDR YQGQIARSEL PSPVDAKIPV QNTRIGTDGK VKKAKALKRS MGDLASDSSS QGEKKKKRKK ESLMETSAGH PLKPMPTGKG GSVVAKLAAQ
0701: PVQIGSMPRD SRFDHQTKEE GTSASLSSSG VTMAMDGLDD IELKVPELLS DLRDLALNPY HGRERNRPQI VMKFFLAFRS LKYEKSLSLS PPAENEPVEG
0801: NAPQSSPSIG ASENLPSENV RVLPSVKLQK PPVRPNDPLK AGRKRAPSDR QEGNALKKLK KINDLKSLAA EKKANQKTLE TPRGDGKETV AALAPAPPKP
0901: VRQELKPVKQ DPKVVKQDPK PFKLDPAKKT EPSARVEEPT MLLMKFPPRT SLPSIAELKA RFVRFGPLDH SSTRVFWKSL TCRVVFRYKH DAEAAHRYAV
1001: KNNSLFGNVS VKYTLRELEV VAPELPDSGK GRGEDTSSET PQPRDAAAEQ RVAPTFVHGQ AQQQQQQQQP VVQLKSCLKK PSSDEGGTGS GGRGTSRVKF
1101: LLGTGEEGHR GEQTMVANRN FNNHATSIAD AGSTSVAALE FNSKNFQKVI SPPPFYPPPP SLLPQFSRPP HDIHHTEVGI RHGYNNNNTL AAPPPANNVP
1201: THLPPFPNTT PAAPPPANPG FNHKMLSLMN RAEDIVTRVK NYYGYMPYHP L
0101: LEDDSGGVDR EIESRVSSDS GCRKIVDQEM GTEVSEIKDG EGAPREGVDQ FDSRSDRKED ALPRVDAHEL EGGSVSQYES LLSKFDDYVA NGMGGAYGMG
0201: TSRASSHALE VGEMVWGKVK SHPWWPGHIF NEALADPLVR RTKREGHVLV AFFGDSSYGW FLPDELVPFD TNFAEKSRQT TAKTFLKAVE EAVDEVGRRC
0301: GLRVVCQCRN PYTFRPKRVP GYFEVDVPDY ETGGIYSADQ ISNARESFQP EDTLSFVKQL ALAPRDSDQK NIRWIKNKAT VYAYRRAIYE EYDETYAQAF
0401: GVQTSRPSHA QLNANRHLYK EPPRAPLSGP LVIAEALGSR KGSTKNLKGK MKKERYLFKR REEPVDFRPH QFNKGQASSS SSLGQTSATI SPGQATASIN
0501: QGQASSSSTC EEGPSTFATG DYVFQKRAPS ASSQVNATKV ESPADFGVTH MDQAPAHSTH DKKDAIWESK DTIVSDVAAG PANMGGSDMV RRGVFSEEID
0601: VVPPPLQQDR YQGQIARSEL PSPVDAKIPV QNTRIGTDGK VKKAKALKRS MGDLASDSSS QGEKKKKRKK ESLMETSAGH PLKPMPTGKG GSVVAKLAAQ
0701: PVQIGSMPRD SRFDHQTKEE GTSASLSSSG VTMAMDGLDD IELKVPELLS DLRDLALNPY HGRERNRPQI VMKFFLAFRS LKYEKSLSLS PPAENEPVEG
0801: NAPQSSPSIG ASENLPSENV RVLPSVKLQK PPVRPNDPLK AGRKRAPSDR QEGNALKKLK KINDLKSLAA EKKANQKTLE TPRGDGKETV AALAPAPPKP
0901: VRQELKPVKQ DPKVVKQDPK PFKLDPAKKT EPSARVEEPT MLLMKFPPRT SLPSIAELKA RFVRFGPLDH SSTRVFWKSL TCRVVFRYKH DAEAAHRYAV
1001: KNNSLFGNVS VKYTLRELEV VAPELPDSGK GRGEDTSSET PQPRDAAAEQ RVAPTFVHGQ AQQQQQQQQP VVQLKSCLKK PSSDEGGTGS GGRGTSRVKF
1101: LLGTGEEGHR GEQTMVANRN FNNHATSIAD AGSTSVAALE FNSKNFQKVI SPPPFYPPPP SLLPQFSRPP HDIHHTEVGI RHGYNNNNTL AAPPPANNVP
1201: THLPPFPNTT PAAPPPANPG FNHKMLSLMN RAEDIVTRVK NYYGYMPYHP L
0001: MYKTKLIPVM NEDAVIVQQT DSIQDPKVTP DDTVVDSSGD VHEAIDDDVE ASSPMELDSA VTNDARVLES ERSEKDGVVG SEEEDEIKSE DVLIDKDDES
0101: SEVKEEEEEE DGSDDQSSEL GSEADEKELD LGLKEEKKGV SDYKSLLSEF DDYVASEKMG SGVSRALSYG FEVGDLVWGK VKSHPWWPGH IFNEAFASPS
0201: VRRMRRIDHV LVAFFGDSSY GWFDPAELIP FEPNLEEKSQ QTVSKHFVRA VEEAKDEASR RSALGLTCKC RNPYNFRPSN VEDYFAVDVP DYELQAVYSV
0301: DQIKNSRDKF LPAETISFVK QLALAPQECD PDSLKFMKKK AVVFAFRKSV FEEFDETYAQ AFGTKSPRSS VSTLEPHNRA PPRAPLSGPL VIAETLGDLK
0401: SSKKPTKVKV SKKKDKYLLK RRDEAGDKSV QFGEIEASSE ASHIQGIDGS LDGDFGLQRR APTLQTPMKD EKSGIVSMDF ASSNTAIPGK EFSASKPSLD
0501: EEKGLAEKSK ERMEERAAVL PEHGKSEAMA SLKPKEEAGT DLGSAGSSLQ PLLESHTSAS EGKSSTGSVI KKVKVAKRSS SEMSSENPPS EPKKKKKKKK
0601: EPDSDHPVKR KNLYSGEAGA KKLSQLGSAH LQTYMEADVP QLLSHLQDLS LDPFHGLSVA SFGTARKFFL RFRSLNYQKS LSVSSSDATV ENARDTKPSK
0701: PVKTVKRTED PSKAGKKRLS SDRQDEIPSA KKLKKTNQLK SMASEKKIIR EAKDSIKPIR EPSRVVQAKP ARGQTGKKTA PSVKVVEPTM LVMKFPPGTS
0801: LPSAALLKAR FGRFGLLDQS AIRVFWKSST CRVVFLYKAD AQTAFRYATG NNTLFGNVNV KYFLRDVDAP KAEPREPENT KEDDEPQSQW LDQAPPLHQP
0901: TLPPPNVNLK SCLKKPVDDP SSSSNNGNGN RAAVRVKFML GGEENSSKAN TEPPQVTMTL NRNSGPSSSS SSVPMEFVSK KFQNVVHHQQ LPPSTLPPIL
1001: PLPPQYTKPQ QLPIKPVDHV EPPMPPSRNF RGPIPAVSAG DISHQMLNLL SKCNEVVANV TGLLGYVPYH PL
0101: SEVKEEEEEE DGSDDQSSEL GSEADEKELD LGLKEEKKGV SDYKSLLSEF DDYVASEKMG SGVSRALSYG FEVGDLVWGK VKSHPWWPGH IFNEAFASPS
0201: VRRMRRIDHV LVAFFGDSSY GWFDPAELIP FEPNLEEKSQ QTVSKHFVRA VEEAKDEASR RSALGLTCKC RNPYNFRPSN VEDYFAVDVP DYELQAVYSV
0301: DQIKNSRDKF LPAETISFVK QLALAPQECD PDSLKFMKKK AVVFAFRKSV FEEFDETYAQ AFGTKSPRSS VSTLEPHNRA PPRAPLSGPL VIAETLGDLK
0401: SSKKPTKVKV SKKKDKYLLK RRDEAGDKSV QFGEIEASSE ASHIQGIDGS LDGDFGLQRR APTLQTPMKD EKSGIVSMDF ASSNTAIPGK EFSASKPSLD
0501: EEKGLAEKSK ERMEERAAVL PEHGKSEAMA SLKPKEEAGT DLGSAGSSLQ PLLESHTSAS EGKSSTGSVI KKVKVAKRSS SEMSSENPPS EPKKKKKKKK
0601: EPDSDHPVKR KNLYSGEAGA KKLSQLGSAH LQTYMEADVP QLLSHLQDLS LDPFHGLSVA SFGTARKFFL RFRSLNYQKS LSVSSSDATV ENARDTKPSK
0701: PVKTVKRTED PSKAGKKRLS SDRQDEIPSA KKLKKTNQLK SMASEKKIIR EAKDSIKPIR EPSRVVQAKP ARGQTGKKTA PSVKVVEPTM LVMKFPPGTS
0801: LPSAALLKAR FGRFGLLDQS AIRVFWKSST CRVVFLYKAD AQTAFRYATG NNTLFGNVNV KYFLRDVDAP KAEPREPENT KEDDEPQSQW LDQAPPLHQP
0901: TLPPPNVNLK SCLKKPVDDP SSSSNNGNGN RAAVRVKFML GGEENSSKAN TEPPQVTMTL NRNSGPSSSS SSVPMEFVSK KFQNVVHHQQ LPPSTLPPIL
1001: PLPPQYTKPQ QLPIKPVDHV EPPMPPSRNF RGPIPAVSAG DISHQMLNLL SKCNEVVANV TGLLGYVPYH PL
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K4D6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.