Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0463500-01 | Rice | nucleus | 16.53 | 30.28 |
| CDY55692 | Canola | nucleus | 16.29 | 30.24 |
| Bra028857.1-P | Field mustard | nucleus | 15.46 | 28.26 |
| CDY04873 | Canola | nucleus | 15.46 | 28.26 |
| GSMUA_Achr9P04320_001 | Banana | nucleus | 25.33 | 27.88 |
| HORVU1Hr1G071710.17 | Barley | endoplasmic reticulum | 16.77 | 25.59 |
| AT5G02950.2 | Thale cress | nucleus | 18.43 | 24.53 |
| GSMUA_Achr5P29300_001 | Banana | nucleus | 44.11 | 23.45 |
| KRH32403 | Soybean | nucleus | 18.55 | 23.25 |
| VIT_08s0040g02440.t01 | Wine grape | nucleus | 23.42 | 22.18 |
| Os05t0463400-01 | Rice | nucleus | 16.29 | 22.06 |
| TraesCS1B01G297600.1 | Wheat | nucleus | 19.38 | 22.0 |
| CDY07935 | Canola | nucleus | 14.74 | 21.95 |
| CDX73990 | Canola | nucleus | 14.86 | 21.59 |
| GSMUA_Achr10P... | Banana | nucleus | 17.72 | 21.02 |
| PGSC0003DMT400087303 | Potato | nucleus | 19.26 | 21.01 |
| KRH19811 | Soybean | nucleus | 19.26 | 20.82 |
| TraesCS1D01G287200.1 | Wheat | nucleus | 18.79 | 20.82 |
| KRH34572 | Soybean | nucleus | 19.86 | 20.52 |
| KRH70385 | Soybean | nucleus | 24.26 | 20.1 |
| GSMUA_Achr11P... | Banana | nucleus | 17.24 | 19.86 |
| TraesCS1A01G288200.1 | Wheat | nucleus | 17.84 | 19.71 |
| Solyc04g049950.1.1 | Tomato | nucleus | 10.58 | 19.65 |
| KRH33337 | Soybean | nucleus | 23.42 | 19.33 |
| TraesCS1D01G287400.1 | Wheat | nucleus | 26.75 | 18.7 |
| TraesCS1B01G297800.1 | Wheat | nucleus | 26.4 | 18.56 |
| AT3G09670.1 | Thale cress | nucleus | 15.93 | 18.46 |
| TraesCS1A01G288400.1 | Wheat | nucleus | 25.8 | 18.1 |
| HORVU1Hr1G071590.1 | Barley | nucleus | 25.56 | 16.85 |
| Zm00001d038396_P003 | Maize | nucleus | 26.87 | 16.74 |
| OQU78150 | Sorghum | nucleus | 27.23 | 16.53 |
| Bra001301.1-P | Field mustard | nucleus | 6.54 | 16.27 |
| Zm00001d010556_P002 | Maize | nucleus | 27.47 | 12.45 |
| PGSC0003DMT400027409 | Potato | nucleus | 23.9 | 12.14 |
| VIT_13s0019g03620.t01 | Wine grape | nucleus | 25.8 | 11.56 |
| GSMUA_Achr8P06730_001 | Banana | nucleus | 12.84 | 10.62 |
| KRG92228 | Soybean | nucleus | 21.05 | 10.14 |
| GSMUA_Achr3P23960_001 | Banana | nucleus | 11.65 | 9.56 |
| Solyc09g007340.2.1 | Tomato | cytosol | 19.74 | 7.83 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P02720_001 | EnsemblPlants:GSMUA_Achr8T02720_001 | EnsemblPlantsGene:GSMUA_Achr8G02720_001 | Gene3D:2.30.30.140 | InterPro:IPR000313 | InterPro:PWWP_dom |
| ncoils:Coil | PANTHER:PTHR42851 | PANTHER:PTHR42851:SF4 | PFAM:PF00855 | PFscan:PS50812 | SEG:seg |
| SMART:SM00293 | SUPFAM:SSF63748 | UniParc:UPI0002960BD2 | UniProt:M0TM24 | MapMan:35.2 | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G02720_001]
Coordinates
chr8:-:1906868..1910816
Molecular Weight (calculated)
92256.6 Da
IEP (calculated)
5.343
GRAVY (calculated)
-0.546
Length
841 amino acids
Sequence
(BLAST)
(BLAST)
001: MNQTGVEADN LECVADQGNV KGGAVEISDK SEPTRCGVSC PENVSHVTKH DFVDGHIDAT EIDLGSDALD AGCAMMAAEA DPPVAFVKVD TERLEGTPDG
101: GRAQVDVIEM SSGINLPGYS LSIAKQNKSF PNEVVNHTVA DSHLHATEGV LGPGTTYQNE AMILKSSVIT SERVDVLTLE VNQDKESQEL DGKTVVGDLS
201: MPDNDQGSSS VLELPLVPRE SSVNASPDVD ANGDQEMVVD EQENSKGTDK QTVKHAAARP GISIKDKDQR ALHHVPYKDE DGFSTSDLVW GKVKSHPWWP
301: GQICDPSDAS DLALKYQKKD NFLVAYFGDK TFAWCDVSQL KHFETFFSQM EKQSSSDVFV GAVQGALDEL SRRIGLGMTC FCFPQAANAG ISYQKVENSG
401: IREGSNGYTF DRSAILSYFQ PGRLLGYVKT LAKFSSGRTN KLELVTANAQ LNAFYRSKGY PKLSSFQFDD DLTESCADIP QSKSDRIYEV TVEQSNPTLS
501: DLVYGKRKSR VRGSYFNNQK HILEDGKKQK SLSELMEAEY CHKKSKVTDS DSSDSGSGKK KRLDSLGDLE IKQPSPAISS SFKIGECIRR VASQLTGSSP
601: ILKSHNETSM KNVSKNDNIF DMFVSDGFSH NIKQSPKLRI DISEDYSSPD EMLSQLRIVG RNPIKGYSFL STIISFFTEF RDYCVSIGTV SPNSLPSETD
701: LIRVFSRYGP LKEAATEVQR RNNRVKVVFK RRADAEIAFS SAGKYSIFGP SLLSYRLRYL PSTPDTSPAT KLPDKRDSLL VESSDLDIPD NLHSSISSAP
801: NTNLQDKSDA TLTESSNTSI PGDLRSSKSN SSRDTNLRIK K
101: GRAQVDVIEM SSGINLPGYS LSIAKQNKSF PNEVVNHTVA DSHLHATEGV LGPGTTYQNE AMILKSSVIT SERVDVLTLE VNQDKESQEL DGKTVVGDLS
201: MPDNDQGSSS VLELPLVPRE SSVNASPDVD ANGDQEMVVD EQENSKGTDK QTVKHAAARP GISIKDKDQR ALHHVPYKDE DGFSTSDLVW GKVKSHPWWP
301: GQICDPSDAS DLALKYQKKD NFLVAYFGDK TFAWCDVSQL KHFETFFSQM EKQSSSDVFV GAVQGALDEL SRRIGLGMTC FCFPQAANAG ISYQKVENSG
401: IREGSNGYTF DRSAILSYFQ PGRLLGYVKT LAKFSSGRTN KLELVTANAQ LNAFYRSKGY PKLSSFQFDD DLTESCADIP QSKSDRIYEV TVEQSNPTLS
501: DLVYGKRKSR VRGSYFNNQK HILEDGKKQK SLSELMEAEY CHKKSKVTDS DSSDSGSGKK KRLDSLGDLE IKQPSPAISS SFKIGECIRR VASQLTGSSP
601: ILKSHNETSM KNVSKNDNIF DMFVSDGFSH NIKQSPKLRI DISEDYSSPD EMLSQLRIVG RNPIKGYSFL STIISFFTEF RDYCVSIGTV SPNSLPSETD
701: LIRVFSRYGP LKEAATEVQR RNNRVKVVFK RRADAEIAFS SAGKYSIFGP SLLSYRLRYL PSTPDTSPAT KLPDKRDSLL VESSDLDIPD NLHSSISSAP
801: NTNLQDKSDA TLTESSNTSI PGDLRSSKSN SSRDTNLRIK K
001: MSTESERIES VSEANASSLE VGNDQMSEAL AGQAQELKTI GDDKEGCGNF ASAGDNGMEK VNGFTNLVKE TESVNGELDL GTRTENVGGE SNQSDKKVLV
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF36]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.