Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0463500-01 | Rice | nucleus | 28.5 | 38.56 |
| HORVU1Hr1G071710.17 | Barley | endoplasmic reticulum | 26.41 | 29.76 |
| TraesCS1B01G297600.1 | Wheat | nucleus | 29.31 | 24.56 |
| TraesCS1D01G287200.1 | Wheat | nucleus | 28.99 | 23.72 |
| TraesCS1A01G288200.1 | Wheat | nucleus | 28.34 | 23.13 |
| Bra028857.1-P | Field mustard | nucleus | 15.62 | 21.09 |
| CDY04873 | Canola | nucleus | 15.3 | 20.65 |
| CDY55692 | Canola | nucleus | 14.65 | 20.09 |
| Os05t0122500-00 | Rice | nucleus | 15.94 | 18.79 |
| CDX73990 | Canola | nucleus | 15.78 | 16.93 |
| KRH32403 | Soybean | nucleus | 18.2 | 16.84 |
| GSMUA_Achr8P02720_001 | Banana | nucleus | 22.06 | 16.29 |
| CDY07935 | Canola | nucleus | 14.49 | 15.93 |
| AT5G02950.2 | Thale cress | nucleus | 15.46 | 15.19 |
| AT3G09670.1 | Thale cress | nucleus | 17.07 | 14.6 |
| Os05t0149200-01 | Rice | plastid | 8.7 | 14.44 |
| KRH19811 | Soybean | nucleus | 17.23 | 13.75 |
| PGSC0003DMT400087303 | Potato | nucleus | 16.59 | 13.36 |
| KRH34572 | Soybean | nucleus | 16.91 | 12.9 |
| KRH70385 | Soybean | nucleus | 19.81 | 12.12 |
| KRH33337 | Soybean | nucleus | 19.32 | 11.78 |
| VIT_08s0040g02440.t01 | Wine grape | nucleus | 16.43 | 11.49 |
| Bra001301.1-P | Field mustard | nucleus | 5.31 | 9.76 |
| GSMUA_Achr5P29300_001 | Banana | nucleus | 24.48 | 9.61 |
| Solyc04g049950.1.1 | Tomato | nucleus | 6.12 | 8.39 |
| Os11t0303500-01 | Rice | nucleus | 9.66 | 8.29 |
| PGSC0003DMT400027409 | Potato | nucleus | 20.45 | 7.67 |
| VIT_13s0019g03620.t01 | Wine grape | nucleus | 22.06 | 7.3 |
| KRG92228 | Soybean | nucleus | 15.78 | 5.62 |
| Solyc09g007340.2.1 | Tomato | cytosol | 16.1 | 4.72 |
Protein Annotations
| EnsemblPlants:Os05t0463400-01 | EnsemblPlantsGene:Os05g0463400 | Gene3D:2.30.30.140 | InterPro:IPR000313 | InterPro:PWWP_dom | PANTHER:PTHR42851 |
| PANTHER:PTHR42851:SF4 | PFAM:PF00855 | PFscan:PS50812 | ProteinID:BAS94430.1 | SEG:seg | SMART:SM00293 |
| SUPFAM:SSF63748 | UniParc:UPI000393AC8F | UniProt:A0A0P0WNF2 | MapMan:35.2 | : | : |
Description
PWWP domain containing protein. (Os05t0463400-01)
Coordinates
chr5:+:22759059..22761884
Molecular Weight (calculated)
66907.8 Da
IEP (calculated)
4.928
GRAVY (calculated)
-0.346
Length
621 amino acids
Sequence
(BLAST)
(BLAST)
001: SSPRPRRLPV HHARAHTETE AAKTLAPSST SSSSRAADGD ELALPQGSRL GFSSHSIASG GSDWEVFRCF FGAKFCPPYW CFAGDATLRL RSAPVAVDRG
101: AMELEGDPRL VGVALGEYLT DGEEVMVVGG AGEVAVAARV VKVDGGKVVV AMDEDAAAGG GVGVGVVSDL LYATGSAAVG EGYGGECTDN MQELLDGGGA
201: EERMLGVELG GFRGEAGWTL MPVGDAAIET SEEMSDPVTL QYSETGLTGD DQRAKYRLPP LDGYGFRASG LVWSKLKGHP WWPGEIFDTS DASELALKHQ
301: KKKGSHLVAY FGSNTFAWCD ESQLKPFMSN YSQMANQSNS DAFISSVNLA LEEISRRILS GMCCFCLPED LSDNCMSYMV ENSGLRDGVT CSKVTRSEIL
401: ECFNAENFLS YLRSLALFPG QGGELLDLVI ACSQLTSFFQ SKGCHELASF GSGSELVDDG MDSSSTKNVL LPEAVTYEQK PSEGKPKRRR IKTCVKKPQN
501: DLELTEENPI SSLNNECTFV DCMGLNIIGK VKGKRSEKRR KYVPSPEVHT TDHGQDDSWS GFCLNNDPTD TLGEASAKMR PRRKQRSSKE TCAPSSDLSS
601: HVPPLQLGLL GPKKQIQLIE R
101: AMELEGDPRL VGVALGEYLT DGEEVMVVGG AGEVAVAARV VKVDGGKVVV AMDEDAAAGG GVGVGVVSDL LYATGSAAVG EGYGGECTDN MQELLDGGGA
201: EERMLGVELG GFRGEAGWTL MPVGDAAIET SEEMSDPVTL QYSETGLTGD DQRAKYRLPP LDGYGFRASG LVWSKLKGHP WWPGEIFDTS DASELALKHQ
301: KKKGSHLVAY FGSNTFAWCD ESQLKPFMSN YSQMANQSNS DAFISSVNLA LEEISRRILS GMCCFCLPED LSDNCMSYMV ENSGLRDGVT CSKVTRSEIL
401: ECFNAENFLS YLRSLALFPG QGGELLDLVI ACSQLTSFFQ SKGCHELASF GSGSELVDDG MDSSSTKNVL LPEAVTYEQK PSEGKPKRRR IKTCVKKPQN
501: DLELTEENPI SSLNNECTFV DCMGLNIIGK VKGKRSEKRR KYVPSPEVHT TDHGQDDSWS GFCLNNDPTD TLGEASAKMR PRRKQRSSKE TCAPSSDLSS
601: HVPPLQLGLL GPKKQIQLIE R
001: MSTESERIES VSEANASSLE VGNDQMSEAL AGQAQELKTI GDDKEGCGNF ASAGDNGMEK VNGFTNLVKE TESVNGELDL GTRTENVGGE SNQSDKKVLV
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
101: DSEEVMMVEK RGLLVEKEVE PDMVCSHGAD LSDVKVSDGR LDSEDLVQDR KPDGLEKQGT KVEDLDVVCF MGLEPHESKD ESILDDEIAH VAAKVKISDS
201: DLVWAKVRSH PWWPGQVFDA SAATDKAKKH FKKGSFLVTY FGDCTFAWNE ASRIKPFRQH FSQMAKQSSL PDFIDAIDFA LEEVSRRIEF GLACSCISEE
301: VYQKIKTQNV INPGIREDSS SIHGGDKVSS AVFFEPANLV GYVKRLACSP SYDATDALQL VSQRAQLLAF NRWKGYTDLP EFMTLQGSVE SAPKISPAEE
401: QSSLVEVSDP EPTKSKQVYT KRRKTNLQTE QSSLVEVSDP DKGDCKHDGV FEYEETIVPK KKEKTLAEFI AEKRVSRHNG NTSHEKSGNV PHCEKKRKVV
501: QSKVPKSTKK IKANLQTEDP GSPVSPKNDR KNNLSAGDKI TPQKARKSFG IGASILKVAN QMHCSTPTRL LPCSDSTSKK AAKSNGSGKS LQEKPKAEAL
601: SAREISPSTT LSSPHAASVT KTTSGKSNSV SLDHNLSGEL DQVRKEAPST NLVEDPMLES RDLKDSSKEQ VVHEDKKEAA NVADEKSIMD SNLTGEKISG
701: LDLREQPSNK NCSGGSDSCK EDVSAE
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF36]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.