Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400058347 | Potato | cytosol | 80.33 | 82.15 |
| Solyc01g099360.2.1 | Tomato | nucleus | 20.86 | 14.0 |
| Solyc02g086750.1.1 | Tomato | nucleus | 13.46 | 10.9 |
| Solyc04g049950.1.1 | Tomato | nucleus | 6.51 | 9.71 |
| Solyc09g007340.2.1 | Tomato | cytosol | 15.98 | 5.1 |
| Solyc04g049930.2.1 | Tomato | nucleus | 5.47 | 4.58 |
| Solyc06g071490.1.1 | Tomato | nucleus | 6.66 | 3.96 |
Protein Annotations
| EnsemblPlants:Solyc01g067040.1.1 | EnsemblPlantsGene:Solyc01g067040.1 | Gene3D:2.30.30.140 | InterPro:IPR000313 | InterPro:PWWP_dom | PANTHER:PTHR10688 |
| PANTHER:PTHR10688:SF1 | PFAM:PF00855 | PFscan:PS50812 | SEG:seg | SMART:SM00293 | SUPFAM:SSF63748 |
| UniParc:UPI0002762D4E | UniProt:K4AWV3 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr1:-:75374366..75377920
Molecular Weight (calculated)
76627.0 Da
IEP (calculated)
5.311
GRAVY (calculated)
-0.627
Length
676 amino acids
Sequence
(BLAST)
(BLAST)
001: MRNKKSVECL QIQSSLKMES DNSKGTGPGA MDMYSLVKFG LTSLKKEESN NIFVIGDLVW GKVMSHPWWP GQIYDESLIP SPVCDAKRDG SVLVAFYGDY
101: SYAWLDRNQI IPFEPHFEEK SNNSKIQTFF VAVEEAIDEL KKRAVLGLTC SCLGNFQPTR NEGLYKVDLN GYTPGTIYSS KQIKKCRDGF HPHGMFSFVK
201: KLAMSPRSLP NNVHGIINIA KVTSYRKAIF EENDYTYDQA FDEFEKGVDT YVQAFGVKAS SSVDPIEFSK KEGNQCTDGD KSFEYQGDCS KKSCKRETKR
301: KRREESPPDD QDHKGKFQTD ALFDHLVAKS GEETEKHNEL NDYGAELGNV TDAFKHLKQS PSTFYKESHC PDEHEKTNKK LTLMNCQDEE ELRGFKSLHI
401: QSTLSVESEK KFTEELEWKA EPTMLVIKFS PQTMLPTASE LKAKFGFFGP FDESALRISW GSATCQIVFL NKCNAQAAYD YAIQSRTLFN SDVNYHLVDF
501: DGSEKLMGEC FDDIQSFKSE PPHMSLQELP LQFDTEMKPL PKENPKWRSD VEEKAFLKGI KDTKSRVCDY PEVDVKVNID SESCPLVLSD ILCPSSPVSS
601: SIQYKHKVGC LDETVVSINS KYSMDEGWKS HYQQNLSAIS TSDLSLQLAN LFQKCNEILG GIDESQNQFS NQSELK
101: SYAWLDRNQI IPFEPHFEEK SNNSKIQTFF VAVEEAIDEL KKRAVLGLTC SCLGNFQPTR NEGLYKVDLN GYTPGTIYSS KQIKKCRDGF HPHGMFSFVK
201: KLAMSPRSLP NNVHGIINIA KVTSYRKAIF EENDYTYDQA FDEFEKGVDT YVQAFGVKAS SSVDPIEFSK KEGNQCTDGD KSFEYQGDCS KKSCKRETKR
301: KRREESPPDD QDHKGKFQTD ALFDHLVAKS GEETEKHNEL NDYGAELGNV TDAFKHLKQS PSTFYKESHC PDEHEKTNKK LTLMNCQDEE ELRGFKSLHI
401: QSTLSVESEK KFTEELEWKA EPTMLVIKFS PQTMLPTASE LKAKFGFFGP FDESALRISW GSATCQIVFL NKCNAQAAYD YAIQSRTLFN SDVNYHLVDF
501: DGSEKLMGEC FDDIQSFKSE PPHMSLQELP LQFDTEMKPL PKENPKWRSD VEEKAFLKGI KDTKSRVCDY PEVDVKVNID SESCPLVLSD ILCPSSPVSS
601: SIQYKHKVGC LDETVVSINS KYSMDEGWKS HYQQNLSAIS TSDLSLQLAN LFQKCNEILG GIDESQNQFS NQSELK
001: MNSAEVNVNP RVFGDSFVTF SGNGSGKFEM IDQAEAFLME LDSVAADTGS DGNGNVDLGS RVSNSETEPR FCEMKREIRD SDHRFYELCN ESGEKKMEKR
101: RVPDYKSFLS EFDDYVAREK MGSRNSKALS YGFEVGDMVW GKVKSHPWWP GQIFNEAFAS PSVRRVKKMG YVLVAFFGDN SYGWFDPAEL IPFEPHVKEK
201: SQQTSSDHFA KAVEEAMNEV GRRSALGLTC KCRNQYNFRP INAQGYFAVD VPDYEVQAIY SSKQIQKARD SFSSVQTLAF VKRCALAPQE CDTDSLKSFQ
301: KKVAVCAFRR AVFEEFDETY EQAFRARSVY CLMKTHEPLN RAPLRETLGN PKSYTKAMNV KDSTKQDKYL PKRREEAGDM TVQFGQVQES SQFQGINGSS
401: AWDRLLQRRT PCLQTPRKHE QTGLVSMNFT SSSGNIPGKK SSVSKLSRDD DKGLAQESDV RMGEKATLFP DQEKFEPMKS LKQDETGTNS RSNKSSLKLF
501: SGGKFSAGVG IKKGNVVKRS SGEMKSENCP PEPKKKKKEY VSELNRDTPD KRKALSSGEA WAKKSSQVDS AKRRSNMLIV KLDGLQLLSN LLALSLDPLF
601: GSSDRSSFRV IRQFFFHFRS HVYQKSLATS PSATKLSKSA KTLCRANEQS KAGRNRISSD SQQDVPSTKK LKKTIQFKPL ASDKKTNQDA TKRSSLAPLN
701: PVRDQCRVPI NAKPAIVQQE KKTGPSAMVV EPTMLVMMFP PGESLPSIDL LKARFGRFGQ LDQSAIRVSW KSSICRVGFL YKLDAQTALR YVSGSKSLFG
801: NVNVTYFLRD MKASSASGDH ELKKAKRPKT DKPITKPLNQ LLEQAPPVHQ PNIQLKSCLK KPGNNRNGNH RTVRVKFMLG EKETESPFSV SILPLSSQDS
901: EPKPVNNQVD HVEPPLDPSQ LKVDISLQMM ELLTRCNDAV ANVTGLLGYV PYHSL
101: RVPDYKSFLS EFDDYVAREK MGSRNSKALS YGFEVGDMVW GKVKSHPWWP GQIFNEAFAS PSVRRVKKMG YVLVAFFGDN SYGWFDPAEL IPFEPHVKEK
201: SQQTSSDHFA KAVEEAMNEV GRRSALGLTC KCRNQYNFRP INAQGYFAVD VPDYEVQAIY SSKQIQKARD SFSSVQTLAF VKRCALAPQE CDTDSLKSFQ
301: KKVAVCAFRR AVFEEFDETY EQAFRARSVY CLMKTHEPLN RAPLRETLGN PKSYTKAMNV KDSTKQDKYL PKRREEAGDM TVQFGQVQES SQFQGINGSS
401: AWDRLLQRRT PCLQTPRKHE QTGLVSMNFT SSSGNIPGKK SSVSKLSRDD DKGLAQESDV RMGEKATLFP DQEKFEPMKS LKQDETGTNS RSNKSSLKLF
501: SGGKFSAGVG IKKGNVVKRS SGEMKSENCP PEPKKKKKEY VSELNRDTPD KRKALSSGEA WAKKSSQVDS AKRRSNMLIV KLDGLQLLSN LLALSLDPLF
601: GSSDRSSFRV IRQFFFHFRS HVYQKSLATS PSATKLSKSA KTLCRANEQS KAGRNRISSD SQQDVPSTKK LKKTIQFKPL ASDKKTNQDA TKRSSLAPLN
701: PVRDQCRVPI NAKPAIVQQE KKTGPSAMVV EPTMLVMMFP PGESLPSIDL LKARFGRFGQ LDQSAIRVSW KSSICRVGFL YKLDAQTALR YVSGSKSLFG
801: NVNVTYFLRD MKASSASGDH ELKKAKRPKT DKPITKPLNQ LLEQAPPVHQ PNIQLKSCLK KPGNNRNGNH RTVRVKFMLG EKETESPFSV SILPLSSQDS
901: EPKPVNNQVD HVEPPLDPSQ LKVDISLQMM ELLTRCNDAV ANVTGLLGYV PYHSL
Arabidopsis Description
F22F7.12 protein [Source:UniProtKB/TrEMBL;Acc:Q9MA56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.