Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG93266 | Soybean | nucleus | 61.06 | 39.74 |
| KRH07190 | Soybean | nucleus | 37.82 | 28.82 |
| CDX67453 | Canola | cytosol, nucleus, plastid | 11.34 | 28.72 |
| KRG94143 | Soybean | nucleus | 37.11 | 28.59 |
| CDY11682 | Canola | cytosol, nucleus, plastid | 9.52 | 26.67 |
| AT3G27860.1 | Thale cress | nucleus | 21.15 | 23.16 |
| PGSC0003DMT400001285 | Potato | nucleus | 26.19 | 22.45 |
| Solyc02g086750.1.1 | Tomato | nucleus | 25.49 | 21.8 |
| VIT_14s0066g01120.t01 | Wine grape | nucleus | 29.69 | 21.79 |
| CDX86465 | Canola | nucleus | 15.69 | 21.17 |
| Bra025306.1-P | Field mustard | nucleus | 15.69 | 21.17 |
| CDY44440 | Canola | plastid | 17.09 | 20.89 |
| Bra028455.1-P | Field mustard | nucleus | 23.95 | 19.24 |
| AT5G40340.1 | Thale cress | nucleus | 26.75 | 18.95 |
| KRH32403 | Soybean | nucleus | 16.81 | 17.88 |
| KRH19811 | Soybean | nucleus | 16.39 | 15.04 |
| KRH70385 | Soybean | nucleus | 21.15 | 14.88 |
| KRH33337 | Soybean | nucleus | 21.01 | 14.72 |
| KRH34572 | Soybean | nucleus | 16.67 | 14.62 |
| KRG96822 | Soybean | nucleus | 17.51 | 11.63 |
| KRH33902 | Soybean | nucleus | 16.53 | 11.29 |
| KRG92886 | Soybean | nucleus | 16.53 | 11.17 |
| KRG92228 | Soybean | nucleus | 18.21 | 7.45 |
| KRH17636 | Soybean | nucleus | 7.0 | 6.7 |
| KRG90051 | Soybean | nucleus | 6.02 | 5.58 |
Protein Annotations
| Gene3D:2.30.30.140 | MapMan:35.2 | UniProt:A0A0R0JPK7 | EMBL:ACUP02002787 | ncoils:Coil | EnsemblPlantsGene:GLYMA_05G006200 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR000313 | EnsemblPlants:KRH56588 | ProteinID:KRH56588 |
| ProteinID:KRH56588.1 | ProteinID:KRH56589.1 | PFAM:PF00855 | PFscan:PS50812 | PANTHER:PTHR42851 | PANTHER:PTHR42851:SF6 |
| InterPro:PWWP_dom | InterPro:RBD_domain_sf | SMART:SM00293 | SUPFAM:SSF54928 | SUPFAM:SSF63748 | UniParc:UPI0006ED68DD |
Description
hypothetical protein
Coordinates
chr5:+:566690..571021
Molecular Weight (calculated)
78412.1 Da
IEP (calculated)
5.275
GRAVY (calculated)
-0.590
Length
714 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVDVEDLSV EGYGFVVGDF VWGQVESHPS WPGRIYDPSD ESYFALRLKQ KNRLLVAYFG NGTFAWCQPS QLKPFGDNFD DMVKQNSSID FASAVQEAVN
101: EFGRLLHLKL SHPFVAKKTG PESSLPLAKN SGIKEGVLVP ENAIERLDFL IEPAELLSYV KQISQIIEFG SILELEILKA QLSAYYLSKG GYKLADYMDP
201: QPIPGVEDSV MDETVAGDDG KSTVEAPTQG PFDELGHSPG LSGSISNPVR KQKSIAEIMG EDKDVHTANR ELDATVEMVN AIGSNVGKKR KGSEDGMASK
301: PVQKKMELLL DADGDVSCAK NDGNGDEGNS DVGSLLQSKE KKEAFDEGKS EERNEKGNLS RERKRSKYLS PPFTIPTRGQ REVYLEPESL KVSRKAKVSQ
401: RRAGDAGLSS LPVYKGRFFD GSSYQTREDD GKNIVDPNKI QAPVAEVLSQ VLNAAISPLI RREGTSLDQF VDFTYAFRSS LYCQGSLHEV YEKNQPGRKR
501: KKPESEEDEM LKGLNLSADE HISSLKQNSG QKKRRKETAS GKKGTDKNAA GAVLFVSFWP GSSMPSRSDL VSVYSKFGAL NEAETDMFCT NYTARVSFLR
601: TSDAEKAYNH SQNNNPFGSP TDVTFQLQYS SDGSKSGQQG ERSKNKSLPA ATAPVAFSQG TEASKLIFIQ QKLQGMTLML EASGGKSPDM MAKVESEMKA
701: LLEDVNKMVE ASLF
101: EFGRLLHLKL SHPFVAKKTG PESSLPLAKN SGIKEGVLVP ENAIERLDFL IEPAELLSYV KQISQIIEFG SILELEILKA QLSAYYLSKG GYKLADYMDP
201: QPIPGVEDSV MDETVAGDDG KSTVEAPTQG PFDELGHSPG LSGSISNPVR KQKSIAEIMG EDKDVHTANR ELDATVEMVN AIGSNVGKKR KGSEDGMASK
301: PVQKKMELLL DADGDVSCAK NDGNGDEGNS DVGSLLQSKE KKEAFDEGKS EERNEKGNLS RERKRSKYLS PPFTIPTRGQ REVYLEPESL KVSRKAKVSQ
401: RRAGDAGLSS LPVYKGRFFD GSSYQTREDD GKNIVDPNKI QAPVAEVLSQ VLNAAISPLI RREGTSLDQF VDFTYAFRSS LYCQGSLHEV YEKNQPGRKR
501: KKPESEEDEM LKGLNLSADE HISSLKQNSG QKKRRKETAS GKKGTDKNAA GAVLFVSFWP GSSMPSRSDL VSVYSKFGAL NEAETDMFCT NYTARVSFLR
601: TSDAEKAYNH SQNNNPFGSP TDVTFQLQYS SDGSKSGQQG ERSKNKSLPA ATAPVAFSQG TEASKLIFIQ QKLQGMTLML EASGGKSPDM MAKVESEMKA
701: LLEDVNKMVE ASLF
001: MGNILPTGSR VSENEGSDDN KLKEHDVKME NVKEDSEQIG DNVRSGVSSL RDNFEELENG FHVGDFVWGE EANSQQWWPG QIYDSLDASD LALKTMQKGK
101: LLVAYFGDGS FFGWCNPLEL KPFLENFKEF SKMSDSRRFL LAVEDAVREI GEHVEKFLVC DDAALVSSVA LNLGIKDGVV VPDVRRKIIS SLVLENPGVV
201: LEDVKRLAMT VRFDDLLEIE VLRRKISAFY RCKGRFDLAK FDEHRYIIGL EDKEHESCQR LLRKCSGFAS KKRKCGDVAT TGSTTLRKKR LSEVSKIETA
301: EKEISNGKSL SSRKRKSKRG LDENDDDGIE KREESNDSNH LEESEKKDDL ATPLASICKR LNVDVSSCVK RCNGNGEAIL QTGKRERKKS KYLSPEYMTD
401: FSCRARKIKI ESAESSQIQV AVRMTTPNTA IDVVKLGATP EEMLALIRAA ALNAQYPKDY NSTSCDMVRE FVSNYRSFNN KRNLSDVEKQ PEVKQEIVDE
501: KEKTRNEPGV ELYIKTGFGS TLPSKDDLIK TYEKFGALDK ERSYMFNNNS CSCVAFVNAS DGEEAFNRSL EKCPFATTST VTFKLEYPSS ASSEKKEAET
601: RKGVTEIECL KEKLEGIRAL LDQSEGKITE ELKMKLEDES RNLLDKVRKM II
101: LLVAYFGDGS FFGWCNPLEL KPFLENFKEF SKMSDSRRFL LAVEDAVREI GEHVEKFLVC DDAALVSSVA LNLGIKDGVV VPDVRRKIIS SLVLENPGVV
201: LEDVKRLAMT VRFDDLLEIE VLRRKISAFY RCKGRFDLAK FDEHRYIIGL EDKEHESCQR LLRKCSGFAS KKRKCGDVAT TGSTTLRKKR LSEVSKIETA
301: EKEISNGKSL SSRKRKSKRG LDENDDDGIE KREESNDSNH LEESEKKDDL ATPLASICKR LNVDVSSCVK RCNGNGEAIL QTGKRERKKS KYLSPEYMTD
401: FSCRARKIKI ESAESSQIQV AVRMTTPNTA IDVVKLGATP EEMLALIRAA ALNAQYPKDY NSTSCDMVRE FVSNYRSFNN KRNLSDVEKQ PEVKQEIVDE
501: KEKTRNEPGV ELYIKTGFGS TLPSKDDLIK TYEKFGALDK ERSYMFNNNS CSCVAFVNAS DGEEAFNRSL EKCPFATTST VTFKLEYPSS ASSEKKEAET
601: RKGVTEIECL KEKLEGIRAL LDQSEGKITE ELKMKLEDES RNLLDKVRKM II
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LK91]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.