Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH56588 | Soybean | nucleus | 39.74 | 61.06 |
| CDX67453 | Canola | cytosol, nucleus, plastid | 8.39 | 32.62 |
| KRH07190 | Soybean | nucleus | 26.25 | 30.74 |
| CDY11682 | Canola | cytosol, nucleus, plastid | 7.11 | 30.59 |
| KRG94143 | Soybean | nucleus | 25.8 | 30.53 |
| PGSC0003DMT400001285 | Potato | nucleus | 18.6 | 24.49 |
| AT3G27860.1 | Thale cress | nucleus | 13.86 | 23.31 |
| Bra025306.1-P | Field mustard | nucleus | 11.21 | 23.25 |
| CDX86465 | Canola | nucleus | 11.21 | 23.25 |
| VIT_14s0066g01120.t01 | Wine grape | nucleus | 20.51 | 23.12 |
| Solyc02g086750.1.1 | Tomato | nucleus | 17.59 | 23.11 |
| CDY44440 | Canola | plastid | 11.49 | 21.58 |
| AT5G40340.1 | Thale cress | nucleus | 19.23 | 20.93 |
| Bra028455.1-P | Field mustard | nucleus | 16.86 | 20.81 |
| KRH32403 | Soybean | nucleus | 11.49 | 18.78 |
| KRH70385 | Soybean | nucleus | 16.13 | 17.44 |
| KRH33337 | Soybean | nucleus | 15.13 | 16.29 |
| KRH19811 | Soybean | nucleus | 11.39 | 16.07 |
| KRH34572 | Soybean | nucleus | 11.67 | 15.72 |
| KRH33902 | Soybean | nucleus | 10.85 | 11.39 |
| KRG96822 | Soybean | nucleus | 11.12 | 11.35 |
| KRG92886 | Soybean | nucleus | 10.39 | 10.8 |
| KRG92228 | Soybean | nucleus | 11.21 | 7.05 |
| KRH17636 | Soybean | nucleus | 4.74 | 6.97 |
| KRG90051 | Soybean | nucleus | 3.92 | 5.58 |
Protein Annotations
| EntrezGene:102667448 | Gene3D:2.30.30.140 | MapMan:35.2 | EMBL:ACUP02011546 | ncoils:Coil | EnsemblPlantsGene:GLYMA_19G006600 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR000313 | UniProt:K7MVS3 | EnsemblPlants:KRG93266 |
| ProteinID:KRG93266 | ProteinID:KRG93266.1 | ProteinID:KRG93267.1 | ProteinID:KRG93268.1 | PFAM:PF00855 | PFscan:PS50812 |
| PANTHER:PTHR42851 | PANTHER:PTHR42851:SF6 | InterPro:PWWP_dom | InterPro:RBD_domain_sf | SMART:SM00293 | SUPFAM:SSF54928 |
| SUPFAM:SSF63748 | UniParc:UPI00023D808A | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr19:+:657576..664647
Molecular Weight (calculated)
118299.0 Da
IEP (calculated)
4.354
GRAVY (calculated)
-0.522
Length
1097 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGTDESDSMV QGSSPMAESD SMVQGSEQEK EVREVLGGLR SEEGSCGVTV NGGGFSSSEN QGLHDDGVID VVVKNSSVLE TKVSVLREND CQVLADSEVN
0101: RVSSWLGMQE SDMDAVFSSE GTQKLDFVYG SEKLDYMFAS ESRVPEVSVL SVDGSVGVGG EDGRGGKPEE EGIDEDLDGE VDSTASEGRV SEVSFLSVDS
0201: LIGVGGEDIR DGGESGEVEK EEDYDGNIVT LASESRVAQA AKLSVDGSVG LGGEHGREGK NKDSDGKIVT PASESRVAEA VDFIVDGLVG LGGEDKTDRD
0301: EIEGKVKDEN YAAGNIMTVT SENKVAEAAV LSMDGLVRVG GEDIRNGGRW EGVAKDEDCG GNIVTIEVPV AETSENMDVD VEDSSVEGCG FVVGDFVWGQ
0401: VESHPSWPGL IYDPSDASDF ALKLKQKNKL LVAYFGNGTF AWCQPSQLKP FQDNFDDMVK QSSSIDFANA VQEAATEFGR LLYIKLSRPF VTKKTGPESS
0501: LPLAKNSGIK EGVLVPENDI ERLDFLIEPA ELLSNVKRIS QFVEFGSILE LEILKAQLSA FYLSKGGYKL ADYMDPQPVL GVEDSVMDET VAVVNGKSTV
0601: EAPTQGPFDE LGHSPGLSGS TSNPVRKQKS IAEIMGEDKD VHTAANREVD ATVEMVNAIG LNVGKKRKGS EDNGMALKPV QKRRELLVDT DGDVLSAKND
0701: GKGDEENSSI GSLLQSIEKK TEAFDEGKSE ERNGKGNLSR ERKRSKYLSP PFTIPIRGQR EVYIEPESLK VSRKAKVSQR SAGADGPSSL PVYKGRSFDS
0801: SNYQTQDDGE TIIDPKKIQA PVKEVLSQVL DAATSPLIRR EGTSLDQFVD FTYAFRSSLY SQGSLCELYK KNQPGRKRKM LESEEDGMLK ELNLSADEHL
0901: SSLKQNSGPK KRRKETASGK KGNDENAAGA VLFVSFWPGS SMPSRSDLVS VYSKFGALNE AETDMFRTNY TARVSFLRTS DAEKAYNHSQ NNNPFGSPTD
1001: VTFQLQYSSD GSKSGVQQQG ERSNNKPLPA AATAPVAFSQ GTEASKLIFI QQKLQGMTLM LEEASGGGKS PDMMAKLESE MKALLEDVNK MVEASLF
0101: RVSSWLGMQE SDMDAVFSSE GTQKLDFVYG SEKLDYMFAS ESRVPEVSVL SVDGSVGVGG EDGRGGKPEE EGIDEDLDGE VDSTASEGRV SEVSFLSVDS
0201: LIGVGGEDIR DGGESGEVEK EEDYDGNIVT LASESRVAQA AKLSVDGSVG LGGEHGREGK NKDSDGKIVT PASESRVAEA VDFIVDGLVG LGGEDKTDRD
0301: EIEGKVKDEN YAAGNIMTVT SENKVAEAAV LSMDGLVRVG GEDIRNGGRW EGVAKDEDCG GNIVTIEVPV AETSENMDVD VEDSSVEGCG FVVGDFVWGQ
0401: VESHPSWPGL IYDPSDASDF ALKLKQKNKL LVAYFGNGTF AWCQPSQLKP FQDNFDDMVK QSSSIDFANA VQEAATEFGR LLYIKLSRPF VTKKTGPESS
0501: LPLAKNSGIK EGVLVPENDI ERLDFLIEPA ELLSNVKRIS QFVEFGSILE LEILKAQLSA FYLSKGGYKL ADYMDPQPVL GVEDSVMDET VAVVNGKSTV
0601: EAPTQGPFDE LGHSPGLSGS TSNPVRKQKS IAEIMGEDKD VHTAANREVD ATVEMVNAIG LNVGKKRKGS EDNGMALKPV QKRRELLVDT DGDVLSAKND
0701: GKGDEENSSI GSLLQSIEKK TEAFDEGKSE ERNGKGNLSR ERKRSKYLSP PFTIPIRGQR EVYIEPESLK VSRKAKVSQR SAGADGPSSL PVYKGRSFDS
0801: SNYQTQDDGE TIIDPKKIQA PVKEVLSQVL DAATSPLIRR EGTSLDQFVD FTYAFRSSLY SQGSLCELYK KNQPGRKRKM LESEEDGMLK ELNLSADEHL
0901: SSLKQNSGPK KRRKETASGK KGNDENAAGA VLFVSFWPGS SMPSRSDLVS VYSKFGALNE AETDMFRTNY TARVSFLRTS DAEKAYNHSQ NNNPFGSPTD
1001: VTFQLQYSSD GSKSGVQQQG ERSNNKPLPA AATAPVAFSQ GTEASKLIFI QQKLQGMTLM LEEASGGGKS PDMMAKLESE MKALLEDVNK MVEASLF
001: MGNILPTGSR VSENEGSDDN KLKEHDVKME NVKEDSEQIG DNVRSGVSSL RDNFEELENG FHVGDFVWGE EANSQQWWPG QIYDSLDASD LALKTMQKGK
101: LLVAYFGDGS FFGWCNPLEL KPFLENFKEF SKMSDSRRFL LAVEDAVREI GEHVEKFLVC DDAALVSSVA LNLGIKDGVV VPDVRRKIIS SLVLENPGVV
201: LEDVKRLAMT VRFDDLLEIE VLRRKISAFY RCKGRFDLAK FDEHRYIIGL EDKEHESCQR LLRKCSGFAS KKRKCGDVAT TGSTTLRKKR LSEVSKIETA
301: EKEISNGKSL SSRKRKSKRG LDENDDDGIE KREESNDSNH LEESEKKDDL ATPLASICKR LNVDVSSCVK RCNGNGEAIL QTGKRERKKS KYLSPEYMTD
401: FSCRARKIKI ESAESSQIQV AVRMTTPNTA IDVVKLGATP EEMLALIRAA ALNAQYPKDY NSTSCDMVRE FVSNYRSFNN KRNLSDVEKQ PEVKQEIVDE
501: KEKTRNEPGV ELYIKTGFGS TLPSKDDLIK TYEKFGALDK ERSYMFNNNS CSCVAFVNAS DGEEAFNRSL EKCPFATTST VTFKLEYPSS ASSEKKEAET
601: RKGVTEIECL KEKLEGIRAL LDQSEGKITE ELKMKLEDES RNLLDKVRKM II
101: LLVAYFGDGS FFGWCNPLEL KPFLENFKEF SKMSDSRRFL LAVEDAVREI GEHVEKFLVC DDAALVSSVA LNLGIKDGVV VPDVRRKIIS SLVLENPGVV
201: LEDVKRLAMT VRFDDLLEIE VLRRKISAFY RCKGRFDLAK FDEHRYIIGL EDKEHESCQR LLRKCSGFAS KKRKCGDVAT TGSTTLRKKR LSEVSKIETA
301: EKEISNGKSL SSRKRKSKRG LDENDDDGIE KREESNDSNH LEESEKKDDL ATPLASICKR LNVDVSSCVK RCNGNGEAIL QTGKRERKKS KYLSPEYMTD
401: FSCRARKIKI ESAESSQIQV AVRMTTPNTA IDVVKLGATP EEMLALIRAA ALNAQYPKDY NSTSCDMVRE FVSNYRSFNN KRNLSDVEKQ PEVKQEIVDE
501: KEKTRNEPGV ELYIKTGFGS TLPSKDDLIK TYEKFGALDK ERSYMFNNNS CSCVAFVNAS DGEEAFNRSL EKCPFATTST VTFKLEYPSS ASSEKKEAET
601: RKGVTEIECL KEKLEGIRAL LDQSEGKITE ELKMKLEDES RNLLDKVRKM II
Arabidopsis Description
Tudor/PWWP/MBT superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LK91]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.