Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043914_P001 | Maize | nucleus | 26.97 | 89.17 |
| KXG33081 | Sorghum | nucleus | 87.8 | 88.71 |
| Zm00001d043915_P002 | Maize | nucleus | 60.45 | 88.51 |
| KXG33083 | Sorghum | nucleus | 86.46 | 88.26 |
| OQU75646 | Sorghum | cytosol | 26.97 | 87.0 |
| TraesCS3D01G245800.2 | Wheat | nucleus | 73.83 | 74.07 |
| TraesCS3A01G245700.2 | Wheat | nucleus | 73.78 | 74.06 |
| HORVU3Hr1G061660.1 | Barley | nucleus | 72.97 | 73.64 |
| TraesCS3B01G273900.1 | Wheat | nucleus | 73.13 | 73.57 |
| Zm00001d039002_P019 | Maize | nucleus, plastid | 58.89 | 59.83 |
| Zm00001d009562_P007 | Maize | nucleus, plastid | 55.08 | 54.61 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 51.91 | 54.48 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 55.08 | 53.69 |
| VIT_10s0003g00290.t01 | Wine grape | nucleus | 18.97 | 49.44 |
| VIT_12s0028g03090.t01 | Wine grape | nucleus | 40.35 | 49.28 |
| Solyc07g053610.2.1 | Tomato | nucleus | 42.24 | 44.11 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 52.61 | 43.63 |
| AT5G44180.1 | Thale cress | nucleus | 39.28 | 43.15 |
| KRH21359 | Soybean | nucleus | 40.62 | 43.08 |
| Bra033725.1-P | Field mustard | nucleus | 37.94 | 43.05 |
| CDY22305 | Canola | nucleus | 37.88 | 43.01 |
| KRH55891 | Soybean | nucleus | 41.11 | 42.95 |
| CDX94760 | Canola | nucleus | 38.31 | 42.8 |
| KRH20389 | Soybean | nucleus | 40.73 | 42.2 |
| KRH50116 | Soybean | nucleus | 40.35 | 42.14 |
| CDY35748 | Canola | nucleus | 34.28 | 41.21 |
| Bra010869.1-P | Field mustard | nucleus | 34.66 | 41.08 |
| CDX90154 | Canola | nucleus | 34.61 | 40.94 |
| VIT_10s0003g00270.t01 | Wine grape | nucleus | 24.34 | 40.41 |
| Solyc02g077660.2.1 | Tomato | nucleus | 36.38 | 40.35 |
| AT1G28420.1 | Thale cress | nucleus | 36.75 | 40.12 |
| Bra032908.1-P | Field mustard | nucleus | 35.25 | 39.47 |
| CDY34099 | Canola | nucleus | 35.25 | 39.4 |
| CDY65661 | Canola | nucleus | 35.2 | 39.17 |
| Zm00001d025550_P001 | Maize | nucleus | 7.15 | 32.84 |
| Zm00001d034515_P002 | Maize | nucleus | 15.53 | 24.53 |
Protein Annotations
| EntrezGene:103636162 | MapMan:15.5.3.7 | UniProt:A0A1D6G154 | ProteinID:AQK97196.1 | ncoils:Coil | InterPro:DDT_dom |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:HB1/Asxl_HTH | InterPro:Homeobox-like_sf | InterPro:Homeobox_dom |
| InterPro:IPR001356 | InterPro:IPR018501 | PFAM:PF00046 | PFAM:PF02791 | PFAM:PF05066 | PFAM:PF15612 |
| PFAM:PF15613 | PFscan:PS50071 | PFscan:PS50827 | SMART:SM00389 | SMART:SM00571 | SUPFAM:SSF46689 |
| UniParc:UPI000843F309 | InterPro:WHIM1_dom | InterPro:WHIM2_dom | EnsemblPlantsGene:Zm00001d011560 | EnsemblPlants:Zm00001d011560_P012 | EnsemblPlants:Zm00001d011560_T012 |
| SEG:seg | : | : | : | : | : |
Description
Homeobox-transcription factor 113Homeobox-DDT domain protein RLT1
Coordinates
chr8:+:154457314..154486025
Molecular Weight (calculated)
208734.0 Da
IEP (calculated)
5.110
GRAVY (calculated)
-0.743
Length
1861 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDAGRDGDGA GKAPPKGPAD ATTVPPAPVA ASAPGSSAGT SGSGEKPVKR VMKTPYQLEV LEYTYAGLWN EDFVFFLPAG FFGCFYRLSI SGWFAAVEHY
0101: PSEAKRLELS AKIGLSDRQL QMWFCHRRLK DRKPPSKRQR RDEESALAPV MPPPPVLPAP VMPVASSDLM VGAPGPYDKL LQPVHLRRGA GRSSAVPRIS
0201: MPDLGRRYYE PPPVMITPLM QLTQYELRVI NSVESQLGEP LREDGPALGI NFDPLPPGAF GAPIVPEQQK QPVQSYDTDI FSRHDQKLLK ASAFLPTIES
0301: PFVPNSFTGK RKSTVGNSPV VQPHVGSRAV HEYQFLPEQP SDTYERASPH YYDTPVEASN SRIPSLTSGS QLLHGSEEAA PSYAFQGHTS GSSLLPPSSR
0401: PQVFPVAPTD YEMTQFNSNL SSVPVEGQFD TSQVAAFEDP PVSSERRAYH DEDTSRVERK RKHNEEAKIA KEVEAHERRI RKELEKQDFL NRKREEQRHK
0501: EMERLERERR KEEERLLRER QREEERFQRE QRRENERMEK FLQKQSRREE KQRQKEQLRK EKEAARQKAA NERAAARRIA RDYMELVEDE RLELMELAAQ
0601: NKGLPSMLYL DSDTLQQLDS FRGMVSQFPP ATVKMKLPFS IKPWTGSEDN IGKLLMVWKF LITFTDVLGL CPVTLDEFVQ SLHDYDSRLL GELHVALLKS
0701: IIKDIEDVAR TPSIALGVNP GGGHPQIVEG AYSWGFDIRS WQRHLNLLTW PEILRQFALS AGSGPQLKKR TVEDSHYHYD NEGHDGENVI LALRNGTAAV
0801: NAVAKMKERG YTNRRRSRHR LTPGTVKFAA FHVLSLEGSN GLTILDVAEK IQKSGLRDLT TSKTPEASIA AALSRDAKLF ERTAPSTYCL KSPYRKDPAD
0901: SEAVLSAARE KIRAFQNVLS DSEAEKEADE AERDDDSDCD DADDDPDGDD VNIEVEEDKD PLLAVKAQDE VPSTTTVIGI KTKLDSVGNA LNSSSSFTKS
1001: AKGAPLPYLG RSSAADTSND SPLGGPSANH EVTPGDSENT QIDESNQIEP WVCALAEGDY CDLSVEERLN ALVALVGVAT EGNSIRGVLE ERLELANALK
1101: KQMWAEVQLD KRRFKEEFAS RVQYNSGMSF KPDIYQENNM TEITSTRACD AYKENDGHVG TINNCEMLDQ HSQGNAGGIT YDRNVVGQEI HATPDTSYVQ
1201: QYAYADKTRS QLKSYIGHRA EQLYVYRSLP LGQDRRRNRY WQFTTSASPN DPGSGRIFFE SEDGCWRVID SEDSFDSLVA ALDTRGTREA QLRSMLQMIE
1301: TTFKEAIKRR SASIELSATV YPKNGATDMI RANYHREVGS SSSTPFNDTS DSVTAYSDSF KVELGRNDFE KAAISKRADI FLKWMWRECY NQEETCAMRY
1401: GKKRCSELLH SCNCCYQIYL AEERHCSSCH KTFKSIYNFS DHTTQCEEKW RTDPYWKMQI ADYSVPIGMV LLKLQLVLIE AYIPSEALQP FWTDVYRKSW
1501: SVKLYATKSI AETFQLLTVL EGAIIPDRLS SDFETTSECL NSQAGFASVL PWVPDTTSAV MLRVLDLDSA ILYVQNQKME RDDGGFMKFP SRYTVVKSKQ
1601: ETIPLEPTGM DLYDGRWLPG SGRRGRGRGS RGGSRGGRGR SRGGRIPRGV SSSSRIEFKD GIAASGRAPR KNARRGRGRG RGRGRRTVRP RQPSVGRGRS
1701: IPKENLMGSF SMLTSSKAAD IEESPRSSGA DEWGLETRMT YTERDENSSG SRYEDNEENG QPMDEDYEEQ VPDYSIDYSS GSRHHEMMSM MDHETDEEDE
1801: DAEGDENVEE DDADHAVDDA DVEMDEGDDE IGDDGEDGGV GGEMTPDEDP DATSYSSDYS E
0101: PSEAKRLELS AKIGLSDRQL QMWFCHRRLK DRKPPSKRQR RDEESALAPV MPPPPVLPAP VMPVASSDLM VGAPGPYDKL LQPVHLRRGA GRSSAVPRIS
0201: MPDLGRRYYE PPPVMITPLM QLTQYELRVI NSVESQLGEP LREDGPALGI NFDPLPPGAF GAPIVPEQQK QPVQSYDTDI FSRHDQKLLK ASAFLPTIES
0301: PFVPNSFTGK RKSTVGNSPV VQPHVGSRAV HEYQFLPEQP SDTYERASPH YYDTPVEASN SRIPSLTSGS QLLHGSEEAA PSYAFQGHTS GSSLLPPSSR
0401: PQVFPVAPTD YEMTQFNSNL SSVPVEGQFD TSQVAAFEDP PVSSERRAYH DEDTSRVERK RKHNEEAKIA KEVEAHERRI RKELEKQDFL NRKREEQRHK
0501: EMERLERERR KEEERLLRER QREEERFQRE QRRENERMEK FLQKQSRREE KQRQKEQLRK EKEAARQKAA NERAAARRIA RDYMELVEDE RLELMELAAQ
0601: NKGLPSMLYL DSDTLQQLDS FRGMVSQFPP ATVKMKLPFS IKPWTGSEDN IGKLLMVWKF LITFTDVLGL CPVTLDEFVQ SLHDYDSRLL GELHVALLKS
0701: IIKDIEDVAR TPSIALGVNP GGGHPQIVEG AYSWGFDIRS WQRHLNLLTW PEILRQFALS AGSGPQLKKR TVEDSHYHYD NEGHDGENVI LALRNGTAAV
0801: NAVAKMKERG YTNRRRSRHR LTPGTVKFAA FHVLSLEGSN GLTILDVAEK IQKSGLRDLT TSKTPEASIA AALSRDAKLF ERTAPSTYCL KSPYRKDPAD
0901: SEAVLSAARE KIRAFQNVLS DSEAEKEADE AERDDDSDCD DADDDPDGDD VNIEVEEDKD PLLAVKAQDE VPSTTTVIGI KTKLDSVGNA LNSSSSFTKS
1001: AKGAPLPYLG RSSAADTSND SPLGGPSANH EVTPGDSENT QIDESNQIEP WVCALAEGDY CDLSVEERLN ALVALVGVAT EGNSIRGVLE ERLELANALK
1101: KQMWAEVQLD KRRFKEEFAS RVQYNSGMSF KPDIYQENNM TEITSTRACD AYKENDGHVG TINNCEMLDQ HSQGNAGGIT YDRNVVGQEI HATPDTSYVQ
1201: QYAYADKTRS QLKSYIGHRA EQLYVYRSLP LGQDRRRNRY WQFTTSASPN DPGSGRIFFE SEDGCWRVID SEDSFDSLVA ALDTRGTREA QLRSMLQMIE
1301: TTFKEAIKRR SASIELSATV YPKNGATDMI RANYHREVGS SSSTPFNDTS DSVTAYSDSF KVELGRNDFE KAAISKRADI FLKWMWRECY NQEETCAMRY
1401: GKKRCSELLH SCNCCYQIYL AEERHCSSCH KTFKSIYNFS DHTTQCEEKW RTDPYWKMQI ADYSVPIGMV LLKLQLVLIE AYIPSEALQP FWTDVYRKSW
1501: SVKLYATKSI AETFQLLTVL EGAIIPDRLS SDFETTSECL NSQAGFASVL PWVPDTTSAV MLRVLDLDSA ILYVQNQKME RDDGGFMKFP SRYTVVKSKQ
1601: ETIPLEPTGM DLYDGRWLPG SGRRGRGRGS RGGSRGGRGR SRGGRIPRGV SSSSRIEFKD GIAASGRAPR KNARRGRGRG RGRGRRTVRP RQPSVGRGRS
1701: IPKENLMGSF SMLTSSKAAD IEESPRSSGA DEWGLETRMT YTERDENSSG SRYEDNEENG QPMDEDYEEQ VPDYSIDYSS GSRHHEMMSM MDHETDEEDE
1801: DAEGDENVEE DDADHAVDDA DVEMDEGDDE IGDDGEDGGV GGEMTPDEDP DATSYSSDYS E
0001: MEMGSDGEDQ KIRSVVGDAN LNNKKKKIDN NSSSKDGRVK PKRQMKTPFQ LETLEKVYSE EKYPSEATRA ELSEKLDLSD RQLQMWFCHR RLKDKKDGQS
0101: NKPVKSSVAA VQSASVNELP AAAGSVPEQD SRSDSGSESG CSPYSNSRRN FASGSSSSRA ELDEYETMGK PSYESRLSTM VHRAIVCIEA QLGEPLRDDG
0201: PILGMEFDPL PPGAFGTPIA MQKHLLHPYE SDLYERHDPR PRRSHAAARS FHEQQSLDDP SSFTPNMYER YSENHARGMD YEVARSRISS FMHANGPVPR
0301: SYVTPGHASR NCSTSQQDMP SPIESAHHGD RFLLEKDSSV LGTEDPYLLP DGVRKSSDVH RKGKINDGRL GRGSETRENH GPKDLEKLEI QRKKNEERMR
0401: KEMERNERER RKEEERLMRE RIKEEERLQR EQRREVERRE KFLQRENERA EKKKQKDEIR REKDAIRRKL AIEKATARRI AKESMDLIED EQLELMELAA
0501: ISKGLPSVLQ LDHDTLQNLE VYRDSLSTFP PKSLQLKMPF AISPWKDSDE TVGNLLMVWR FLISFSDVLD LWPFTLDEFI QAFHDYDSRL LGEIHVTLLR
0601: SIIRDVEDVA RTPFSGIGNN QYTTANPEGG HPQIVEGAYA WGFDIRSWKK HLNPLTWPEI LRQLALSAGF GPKLKKKHSR LTNTGDKDEA KGCEDVISTI
0701: RNGTAAESAF ASMREKGLLA PRKSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK TPEASISVAL TRDVKLFERI APSTYCVRAP
0801: YVKDPKDGEA ILADARKKIR AFENGFTGPE DVNDLERDED FEIDIDEDPE VDDLATLASA SKSAVLGEAN VLSGKGVDTM FCDVKADVKS ELEKEFSSPP
0901: PSTMKSIVPQ HSERHKNTVV GGVDAVIDES NQGQSWIQGL TEGDYCHLSV EERLNALVAL VGIANEGNSI RTGLEDRMEA ANALKKQMWA EAQLDNSCMR
1001: DVLKLDLQNL ASSKTESTIG LPIIQSSTRE RDSFDRDPSQ LLDETKPLED LSNDLHKSSA ERALINQDAN ISQENYASKR SRSQLKSYIG HKAEEVYPYR
1101: SLPLGQDRRH NRYWHFAVSV SKSDPCSRLL FVELHDGKWL LIDSEEAFDI LVASLDMRGI RESHLRIMLQ KIEGSFKENA CKDIKLARNP FLTEKSVVNH
1201: SPTDSVSPSS SAISGSNSDS METSTSIRVD LGRNDTENKN LSKRFHDFQR WMWTETYSSL PSCARKYGKK RSELLATCDA CVASYLSEYT FCSSCHQRLD
1301: VVDSSEILDS GLAVSPLPFG VRLLKPLLVF LEASVPDEAL ESFWTEDQRK KWGFRLNTSS SPGELLQVLT SLESAIKKES LSSNFMSAKE LLGAANAEAD
1401: DQGSVDVLPW IPKTVSAVAL RLSELDASII YVKPEKPEVI PEDENEQISL FPRDSPFKGK GPREQEDQDE VAPNPGNRNK KRARVSLGSG SNRKVKRKKA
1501: QSGLNKFVVG RRNVAVNSNL MAVELNHQVP GKGKRTVRKR PERIDEDNSH LVNRMANIVR PKSEEVEEDE EEEEQTFRDI NEDWAAGETP REMEEDWANE
1601: TPNRMMTPMQ VDDESDNSVG VESEDEDGGG QFVDYSQRNK WGLDWNSNLN VAIEEDEEEE VVGVGRVEGE DDAEMSESSE DDDVPANNAA NNYDRESEGY
1701: SSSDS
0101: NKPVKSSVAA VQSASVNELP AAAGSVPEQD SRSDSGSESG CSPYSNSRRN FASGSSSSRA ELDEYETMGK PSYESRLSTM VHRAIVCIEA QLGEPLRDDG
0201: PILGMEFDPL PPGAFGTPIA MQKHLLHPYE SDLYERHDPR PRRSHAAARS FHEQQSLDDP SSFTPNMYER YSENHARGMD YEVARSRISS FMHANGPVPR
0301: SYVTPGHASR NCSTSQQDMP SPIESAHHGD RFLLEKDSSV LGTEDPYLLP DGVRKSSDVH RKGKINDGRL GRGSETRENH GPKDLEKLEI QRKKNEERMR
0401: KEMERNERER RKEEERLMRE RIKEEERLQR EQRREVERRE KFLQRENERA EKKKQKDEIR REKDAIRRKL AIEKATARRI AKESMDLIED EQLELMELAA
0501: ISKGLPSVLQ LDHDTLQNLE VYRDSLSTFP PKSLQLKMPF AISPWKDSDE TVGNLLMVWR FLISFSDVLD LWPFTLDEFI QAFHDYDSRL LGEIHVTLLR
0601: SIIRDVEDVA RTPFSGIGNN QYTTANPEGG HPQIVEGAYA WGFDIRSWKK HLNPLTWPEI LRQLALSAGF GPKLKKKHSR LTNTGDKDEA KGCEDVISTI
0701: RNGTAAESAF ASMREKGLLA PRKSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK TPEASISVAL TRDVKLFERI APSTYCVRAP
0801: YVKDPKDGEA ILADARKKIR AFENGFTGPE DVNDLERDED FEIDIDEDPE VDDLATLASA SKSAVLGEAN VLSGKGVDTM FCDVKADVKS ELEKEFSSPP
0901: PSTMKSIVPQ HSERHKNTVV GGVDAVIDES NQGQSWIQGL TEGDYCHLSV EERLNALVAL VGIANEGNSI RTGLEDRMEA ANALKKQMWA EAQLDNSCMR
1001: DVLKLDLQNL ASSKTESTIG LPIIQSSTRE RDSFDRDPSQ LLDETKPLED LSNDLHKSSA ERALINQDAN ISQENYASKR SRSQLKSYIG HKAEEVYPYR
1101: SLPLGQDRRH NRYWHFAVSV SKSDPCSRLL FVELHDGKWL LIDSEEAFDI LVASLDMRGI RESHLRIMLQ KIEGSFKENA CKDIKLARNP FLTEKSVVNH
1201: SPTDSVSPSS SAISGSNSDS METSTSIRVD LGRNDTENKN LSKRFHDFQR WMWTETYSSL PSCARKYGKK RSELLATCDA CVASYLSEYT FCSSCHQRLD
1301: VVDSSEILDS GLAVSPLPFG VRLLKPLLVF LEASVPDEAL ESFWTEDQRK KWGFRLNTSS SPGELLQVLT SLESAIKKES LSSNFMSAKE LLGAANAEAD
1401: DQGSVDVLPW IPKTVSAVAL RLSELDASII YVKPEKPEVI PEDENEQISL FPRDSPFKGK GPREQEDQDE VAPNPGNRNK KRARVSLGSG SNRKVKRKKA
1501: QSGLNKFVVG RRNVAVNSNL MAVELNHQVP GKGKRTVRKR PERIDEDNSH LVNRMANIVR PKSEEVEEDE EEEEQTFRDI NEDWAAGETP REMEEDWANE
1601: TPNRMMTPMQ VDDESDNSVG VESEDEDGGG QFVDYSQRNK WGLDWNSNLN VAIEEDEEEE VVGVGRVEGE DDAEMSESSE DDDVPANNAA NNYDRESEGY
1701: SSSDS
Arabidopsis Description
RLT1Homeobox-DDT domain protein RLT1 [Source:UniProtKB/Swiss-Prot;Acc:F4HY56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.