Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH20389 | Soybean | nucleus | 93.21 | 92.48 |
| KRH21359 | Soybean | nucleus | 73.34 | 74.47 |
| Solyc02g077660.2.1 | Tomato | nucleus | 46.02 | 48.87 |
| VIT_10s0003g00270.t01 | Wine grape | nucleus | 30.42 | 48.35 |
| Bra010869.1-P | Field mustard | nucleus | 42.31 | 48.03 |
| CDY35748 | Canola | nucleus | 41.69 | 48.0 |
| CDX90154 | Canola | nucleus | 42.2 | 47.81 |
| Bra032908.1-P | Field mustard | nucleus | 44.33 | 47.53 |
| CDY34099 | Canola | nucleus | 44.33 | 47.45 |
| CDY65661 | Canola | nucleus | 44.0 | 46.89 |
| AT1G28420.1 | Thale cress | nucleus | 44.39 | 46.39 |
| Zm00001d043915_P002 | Maize | nucleus | 32.77 | 45.95 |
| KRH55891 | Soybean | nucleus | 44.89 | 44.92 |
| Os05t0562400-01 | Rice | nucleus | 35.02 | 44.67 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 43.21 | 43.43 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 45.34 | 42.33 |
| KXG33083 | Sorghum | nucleus | 42.76 | 41.8 |
| KXG33081 | Sorghum | nucleus | 42.99 | 41.59 |
| HORVU3Hr1G061660.1 | Barley | nucleus | 42.99 | 41.54 |
| TraesCS3A01G245700.2 | Wheat | nucleus | 42.93 | 41.26 |
| TraesCS3D01G245800.2 | Wheat | nucleus | 42.82 | 41.13 |
| TraesCS3B01G273900.1 | Wheat | nucleus | 42.54 | 40.97 |
| Zm00001d039002_P019 | Maize | nucleus, plastid | 41.58 | 40.45 |
| Zm00001d011560_P012 | Maize | nucleus | 42.14 | 40.35 |
| TraesCS1B01G424100.1 | Wheat | nucleus | 42.14 | 40.31 |
| TraesCS1D01G403700.1 | Wheat | nucleus | 41.86 | 40.28 |
| HORVU1Hr1G087180.1 | Barley | nucleus | 41.92 | 40.23 |
| Zm00001d009562_P007 | Maize | nucleus, plastid | 42.37 | 40.22 |
| TraesCS1A01G395600.1 | Wheat | nucleus | 41.75 | 40.02 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 45.12 | 35.83 |
| Zm00001d043914_P001 | Maize | nucleus | 9.6 | 30.37 |
| OQU75646 | Sorghum | cytosol | 9.48 | 29.29 |
| KRH60120 | Soybean | nucleus | 15.6 | 25.69 |
| KRH41406 | Soybean | nucleus | 15.43 | 25.44 |
| KRH62715 | Soybean | nucleus | 3.31 | 21.93 |
| KRG99068 | Soybean | nucleus | 5.72 | 19.35 |
| KRH73554 | Soybean | nucleus | 5.67 | 19.2 |
| KRH45931 | Soybean | nucleus | 5.67 | 18.84 |
| KRH14573 | Soybean | nucleus | 5.56 | 18.79 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100818817 | MapMan:15.5.3.7 | UniProt:A0A0R0JEE7 | EMBL:ACUP02004659 | ncoils:Coil |
| InterPro:DDT_dom | EnsemblPlantsGene:GLYMA_07G201200 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:HB1/Asxl_HTH |
| InterPro:Homeobox-like_sf | InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR018501 | EnsemblPlants:KRH50116 | ProteinID:KRH50116 |
| ProteinID:KRH50116.1 | PFAM:PF00046 | PFAM:PF02791 | PFAM:PF05066 | PFAM:PF15612 | PFAM:PF15613 |
| PFscan:PS50071 | PFscan:PS50827 | PANTHER:PTHR36968 | PANTHER:PTHR36968:SF6 | SMART:SM00389 | SMART:SM00571 |
| SUPFAM:SSF46689 | UniParc:UPI0006EDD787 | InterPro:WHIM1_dom | InterPro:WHIM2_dom | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr7:-:36970076..36978966
Molecular Weight (calculated)
199396.0 Da
IEP (calculated)
5.262
GRAVY (calculated)
-0.806
Length
1782 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEGEGCSEGE NNRKRGGSDD DSNENNNNNN NGSSGKIVNS NEGQSKPKRQ MKTPFQLETL EKAYAVDNYP SETMRVELSE KLGLSDRQLQ MWFCHRRLKD
0101: KKDLPSKKPP RKVLAEPLPD SPRDDPRLSL ELANEYGSGS GSGSSPYARV EPLNVVPRCV PGYYESPQAK LELRAIACVE AQLGEPLRDD GPILGLEFDP
0201: LPPDAFGAPI AAVTEQQKLP SFAYDSKIYE RHDARTNKAL ARTFRDNQFL PNKSGIRSDA SGQFSQSHLH DPIEGFVRNP PFAHGNEHLP RIHATKGHSS
0301: RVRLLSQQDK QLIPYQSPSR DDDAAPQREL YPNIANAGKN SHSTGHQIVG PENLHALPSV QVLHNNATWI EKKRKSDDAH DVEAHEMKIR KELEKQDNLR
0401: RKSEERTRKE MERQDRERKK EEERLMRERQ REEERARREQ KREMERREKF LLKENLKAEK TRQREELRKE REAERRKAAL EKATARRMAK ESMELIEDEQ
0501: LEMMELAASS TGFSSIVHLD FDTLQHIESF RDSLCVFPPK SVKLRKPFAI KPWINSENNV GNLLMVWRFL INFADVLELW SFTLDEFVQA FHDYDSRLLG
0601: EIHVSLLKVI IKDIEDVART PSTGLGANQN GAANTGGGHP EIVAGAYAWG FDIRNWHKHL NLLTWPEIFR QLALSAGYGP QLKKRSISWS YANNKDEGRS
0701: CEDIISTLRN GSAAENAVAK MHERGLLAPR RSRHRLTPGT VKFAAFHVLS LEGEKGLNVL ELAEKIQKSG LRDLTTSKTP EASISVALTR DAKLFERIAP
0801: STYCVREAFR KDPADAESIL SEARKKIQIF ENGFLAGEDA DDVERGESES DEIDEDPEVD DLVNPTSANK TSEQCDDFSS NGKENLGHNV ELQGEFDKNL
0901: PCFPESGSKN ADAPIAVTGQ SGACEDLDVG NLGEDNMEID ERKPGESWVQ GLAEEEYSDL SVEERLNALA VLVGVANEGN SIRVVLEDRL EAANALKKQM
1001: WAEAQVDKVR LKDDTFSKSD FPSINGNKVE IQYSCPVTEG KQSPLLGINI GNNINNSVPS PSIAENHKAA SGSQSLSVEK HSSVQDLCTG PDNPQAQSFV
1101: QYSKRSRSQW KSYISHMAEE MYVYRSLPLG QDRRRNRYWQ FVASASSNDP GSGRIFVEYL DGNWRLIDTE EAFDVLLNSL DSRGIRESHL RLMLQKVEIS
1201: FKENVRLNTQ CSKIGSIGET CVKNEADETD SSPDRHTGSD SPSSTLCGLN SDTSETSSSF KIELGKSESD KKSALRRYQD FQKWMWKECY NSPILCAMKY
1301: GKKRCKPQVV ICDICLNPYF FEDSHCSGCH QTFSSNSGFS FSKHAFQCGD KLSKNICILD SSLPLRTRLL KAMLAFIEVS VPPEAFQSNW TEDIRRHWSV
1401: KLSKSSSVEE LLQILTLLER ALKRDFLSST FSTTGEQLGL NSMSKSAAQT STDPESVAVL PWVPLTTSAA SLRLLEFDAS IVYVPHEKPE PCEEKEDRVY
1501: MKLPSRYNPS KSSKAAEAAD LDHDEFMKVK SASVKIVQSN NKRGRGSRDK GRGKKLSKTK QNTGHRGAKV AGNASQRIKQ QEVGSQGQAG GRGRRTVRKR
1601: RVGKKAVEDL LLGHRGATHS SSIGRESLRS MDEDWDDEKA SPVTPIHMGA ANNSNSIEEA ESDDNVQAME SDDNVQAMES DDNEQAAESD DNGQAVEYDQ
1701: GNWEIGFNGA PSRWSRDLVG MSDDDVEASE DDDDNDNVIG IENNGEEDSE ADAMSEEGSD GTANRIVNEE SSESDVSEDS SD
0101: KKDLPSKKPP RKVLAEPLPD SPRDDPRLSL ELANEYGSGS GSGSSPYARV EPLNVVPRCV PGYYESPQAK LELRAIACVE AQLGEPLRDD GPILGLEFDP
0201: LPPDAFGAPI AAVTEQQKLP SFAYDSKIYE RHDARTNKAL ARTFRDNQFL PNKSGIRSDA SGQFSQSHLH DPIEGFVRNP PFAHGNEHLP RIHATKGHSS
0301: RVRLLSQQDK QLIPYQSPSR DDDAAPQREL YPNIANAGKN SHSTGHQIVG PENLHALPSV QVLHNNATWI EKKRKSDDAH DVEAHEMKIR KELEKQDNLR
0401: RKSEERTRKE MERQDRERKK EEERLMRERQ REEERARREQ KREMERREKF LLKENLKAEK TRQREELRKE REAERRKAAL EKATARRMAK ESMELIEDEQ
0501: LEMMELAASS TGFSSIVHLD FDTLQHIESF RDSLCVFPPK SVKLRKPFAI KPWINSENNV GNLLMVWRFL INFADVLELW SFTLDEFVQA FHDYDSRLLG
0601: EIHVSLLKVI IKDIEDVART PSTGLGANQN GAANTGGGHP EIVAGAYAWG FDIRNWHKHL NLLTWPEIFR QLALSAGYGP QLKKRSISWS YANNKDEGRS
0701: CEDIISTLRN GSAAENAVAK MHERGLLAPR RSRHRLTPGT VKFAAFHVLS LEGEKGLNVL ELAEKIQKSG LRDLTTSKTP EASISVALTR DAKLFERIAP
0801: STYCVREAFR KDPADAESIL SEARKKIQIF ENGFLAGEDA DDVERGESES DEIDEDPEVD DLVNPTSANK TSEQCDDFSS NGKENLGHNV ELQGEFDKNL
0901: PCFPESGSKN ADAPIAVTGQ SGACEDLDVG NLGEDNMEID ERKPGESWVQ GLAEEEYSDL SVEERLNALA VLVGVANEGN SIRVVLEDRL EAANALKKQM
1001: WAEAQVDKVR LKDDTFSKSD FPSINGNKVE IQYSCPVTEG KQSPLLGINI GNNINNSVPS PSIAENHKAA SGSQSLSVEK HSSVQDLCTG PDNPQAQSFV
1101: QYSKRSRSQW KSYISHMAEE MYVYRSLPLG QDRRRNRYWQ FVASASSNDP GSGRIFVEYL DGNWRLIDTE EAFDVLLNSL DSRGIRESHL RLMLQKVEIS
1201: FKENVRLNTQ CSKIGSIGET CVKNEADETD SSPDRHTGSD SPSSTLCGLN SDTSETSSSF KIELGKSESD KKSALRRYQD FQKWMWKECY NSPILCAMKY
1301: GKKRCKPQVV ICDICLNPYF FEDSHCSGCH QTFSSNSGFS FSKHAFQCGD KLSKNICILD SSLPLRTRLL KAMLAFIEVS VPPEAFQSNW TEDIRRHWSV
1401: KLSKSSSVEE LLQILTLLER ALKRDFLSST FSTTGEQLGL NSMSKSAAQT STDPESVAVL PWVPLTTSAA SLRLLEFDAS IVYVPHEKPE PCEEKEDRVY
1501: MKLPSRYNPS KSSKAAEAAD LDHDEFMKVK SASVKIVQSN NKRGRGSRDK GRGKKLSKTK QNTGHRGAKV AGNASQRIKQ QEVGSQGQAG GRGRRTVRKR
1601: RVGKKAVEDL LLGHRGATHS SSIGRESLRS MDEDWDDEKA SPVTPIHMGA ANNSNSIEEA ESDDNVQAME SDDNVQAMES DDNEQAAESD DNGQAVEYDQ
1701: GNWEIGFNGA PSRWSRDLVG MSDDDVEASE DDDDNDNVIG IENNGEEDSE ADAMSEEGSD GTANRIVNEE SSESDVSEDS SD
0001: MEMGSDGEDQ KIRSVVGDAN LNNKKKKIDN NSSSKDGRVK PKRQMKTPFQ LETLEKVYSE EKYPSEATRA ELSEKLDLSD RQLQMWFCHR RLKDKKDGQS
0101: NKPVKSSVAA VQSASVNELP AAAGSVPEQD SRSDSGSESG CSPYSNSRRN FASGSSSSRA ELDEYETMGK PSYESRLSTM VHRAIVCIEA QLGEPLRDDG
0201: PILGMEFDPL PPGAFGTPIA MQKHLLHPYE SDLYERHDPR PRRSHAAARS FHEQQSLDDP SSFTPNMYER YSENHARGMD YEVARSRISS FMHANGPVPR
0301: SYVTPGHASR NCSTSQQDMP SPIESAHHGD RFLLEKDSSV LGTEDPYLLP DGVRKSSDVH RKGKINDGRL GRGSETRENH GPKDLEKLEI QRKKNEERMR
0401: KEMERNERER RKEEERLMRE RIKEEERLQR EQRREVERRE KFLQRENERA EKKKQKDEIR REKDAIRRKL AIEKATARRI AKESMDLIED EQLELMELAA
0501: ISKGLPSVLQ LDHDTLQNLE VYRDSLSTFP PKSLQLKMPF AISPWKDSDE TVGNLLMVWR FLISFSDVLD LWPFTLDEFI QAFHDYDSRL LGEIHVTLLR
0601: SIIRDVEDVA RTPFSGIGNN QYTTANPEGG HPQIVEGAYA WGFDIRSWKK HLNPLTWPEI LRQLALSAGF GPKLKKKHSR LTNTGDKDEA KGCEDVISTI
0701: RNGTAAESAF ASMREKGLLA PRKSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK TPEASISVAL TRDVKLFERI APSTYCVRAP
0801: YVKDPKDGEA ILADARKKIR AFENGFTGPE DVNDLERDED FEIDIDEDPE VDDLATLASA SKSAVLGEAN VLSGKGVDTM FCDVKADVKS ELEKEFSSPP
0901: PSTMKSIVPQ HSERHKNTVV GGVDAVIDES NQGQSWIQGL TEGDYCHLSV EERLNALVAL VGIANEGNSI RTGLEDRMEA ANALKKQMWA EAQLDNSCMR
1001: DVLKLDLQNL ASSKTESTIG LPIIQSSTRE RDSFDRDPSQ LLDETKPLED LSNDLHKSSA ERALINQDAN ISQENYASKR SRSQLKSYIG HKAEEVYPYR
1101: SLPLGQDRRH NRYWHFAVSV SKSDPCSRLL FVELHDGKWL LIDSEEAFDI LVASLDMRGI RESHLRIMLQ KIEGSFKENA CKDIKLARNP FLTEKSVVNH
1201: SPTDSVSPSS SAISGSNSDS METSTSIRVD LGRNDTENKN LSKRFHDFQR WMWTETYSSL PSCARKYGKK RSELLATCDA CVASYLSEYT FCSSCHQRLD
1301: VVDSSEILDS GLAVSPLPFG VRLLKPLLVF LEASVPDEAL ESFWTEDQRK KWGFRLNTSS SPGELLQVLT SLESAIKKES LSSNFMSAKE LLGAANAEAD
1401: DQGSVDVLPW IPKTVSAVAL RLSELDASII YVKPEKPEVI PEDENEQISL FPRDSPFKGK GPREQEDQDE VAPNPGNRNK KRARVSLGSG SNRKVKRKKA
1501: QSGLNKFVVG RRNVAVNSNL MAVELNHQVP GKGKRTVRKR PERIDEDNSH LVNRMANIVR PKSEEVEEDE EEEEQTFRDI NEDWAAGETP REMEEDWANE
1601: TPNRMMTPMQ VDDESDNSVG VESEDEDGGG QFVDYSQRNK WGLDWNSNLN VAIEEDEEEE VVGVGRVEGE DDAEMSESSE DDDVPANNAA NNYDRESEGY
1701: SSSDS
0101: NKPVKSSVAA VQSASVNELP AAAGSVPEQD SRSDSGSESG CSPYSNSRRN FASGSSSSRA ELDEYETMGK PSYESRLSTM VHRAIVCIEA QLGEPLRDDG
0201: PILGMEFDPL PPGAFGTPIA MQKHLLHPYE SDLYERHDPR PRRSHAAARS FHEQQSLDDP SSFTPNMYER YSENHARGMD YEVARSRISS FMHANGPVPR
0301: SYVTPGHASR NCSTSQQDMP SPIESAHHGD RFLLEKDSSV LGTEDPYLLP DGVRKSSDVH RKGKINDGRL GRGSETRENH GPKDLEKLEI QRKKNEERMR
0401: KEMERNERER RKEEERLMRE RIKEEERLQR EQRREVERRE KFLQRENERA EKKKQKDEIR REKDAIRRKL AIEKATARRI AKESMDLIED EQLELMELAA
0501: ISKGLPSVLQ LDHDTLQNLE VYRDSLSTFP PKSLQLKMPF AISPWKDSDE TVGNLLMVWR FLISFSDVLD LWPFTLDEFI QAFHDYDSRL LGEIHVTLLR
0601: SIIRDVEDVA RTPFSGIGNN QYTTANPEGG HPQIVEGAYA WGFDIRSWKK HLNPLTWPEI LRQLALSAGF GPKLKKKHSR LTNTGDKDEA KGCEDVISTI
0701: RNGTAAESAF ASMREKGLLA PRKSRHRLTP GTVKFAAFHV LSLEGSKGLT VLELADKIQK SGLRDLTTSK TPEASISVAL TRDVKLFERI APSTYCVRAP
0801: YVKDPKDGEA ILADARKKIR AFENGFTGPE DVNDLERDED FEIDIDEDPE VDDLATLASA SKSAVLGEAN VLSGKGVDTM FCDVKADVKS ELEKEFSSPP
0901: PSTMKSIVPQ HSERHKNTVV GGVDAVIDES NQGQSWIQGL TEGDYCHLSV EERLNALVAL VGIANEGNSI RTGLEDRMEA ANALKKQMWA EAQLDNSCMR
1001: DVLKLDLQNL ASSKTESTIG LPIIQSSTRE RDSFDRDPSQ LLDETKPLED LSNDLHKSSA ERALINQDAN ISQENYASKR SRSQLKSYIG HKAEEVYPYR
1101: SLPLGQDRRH NRYWHFAVSV SKSDPCSRLL FVELHDGKWL LIDSEEAFDI LVASLDMRGI RESHLRIMLQ KIEGSFKENA CKDIKLARNP FLTEKSVVNH
1201: SPTDSVSPSS SAISGSNSDS METSTSIRVD LGRNDTENKN LSKRFHDFQR WMWTETYSSL PSCARKYGKK RSELLATCDA CVASYLSEYT FCSSCHQRLD
1301: VVDSSEILDS GLAVSPLPFG VRLLKPLLVF LEASVPDEAL ESFWTEDQRK KWGFRLNTSS SPGELLQVLT SLESAIKKES LSSNFMSAKE LLGAANAEAD
1401: DQGSVDVLPW IPKTVSAVAL RLSELDASII YVKPEKPEVI PEDENEQISL FPRDSPFKGK GPREQEDQDE VAPNPGNRNK KRARVSLGSG SNRKVKRKKA
1501: QSGLNKFVVG RRNVAVNSNL MAVELNHQVP GKGKRTVRKR PERIDEDNSH LVNRMANIVR PKSEEVEEDE EEEEQTFRDI NEDWAAGETP REMEEDWANE
1601: TPNRMMTPMQ VDDESDNSVG VESEDEDGGG QFVDYSQRNK WGLDWNSNLN VAIEEDEEEE VVGVGRVEGE DDAEMSESSE DDDVPANNAA NNYDRESEGY
1701: SSSDS
Arabidopsis Description
RLT1Homeobox-DDT domain protein RLT1 [Source:UniProtKB/Swiss-Prot;Acc:F4HY56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.