Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G403700.1 | Wheat | nucleus | 92.73 | 92.98 |
| TraesCS1B01G424100.1 | Wheat | nucleus | 92.95 | 92.65 |
| TraesCS1A01G395600.1 | Wheat | nucleus | 91.55 | 91.45 |
| Os05t0562400-01 | Rice | nucleus | 56.17 | 74.66 |
| Zm00001d039002_P019 | Maize | nucleus, plastid | 65.27 | 66.16 |
| HORVU3Hr1G061660.1 | Barley | nucleus | 63.06 | 63.5 |
| Zm00001d009562_P007 | Maize | nucleus, plastid | 60.85 | 60.2 |
| GSMUA_Achr9P06610_001 | Banana | nucleus | 49.7 | 52.06 |
| GSMUA_Achr8P27210_001 | Banana | nucleus | 52.99 | 51.55 |
| VIT_12s0028g03090.t01 | Wine grape | nucleus | 40.28 | 49.08 |
| VIT_10s0003g00290.t01 | Wine grape | nucleus | 18.69 | 48.6 |
| Solyc07g053610.2.1 | Tomato | nucleus | 41.57 | 43.32 |
| KRH21359 | Soybean | nucleus | 40.76 | 43.13 |
| CDY35748 | Canola | nucleus | 35.59 | 42.7 |
| AT5G44180.1 | Thale cress | nucleus | 38.77 | 42.5 |
| GSMUA_Achr6P26980_001 | Banana | nucleus | 51.1 | 42.29 |
| KRH20389 | Soybean | nucleus | 40.87 | 42.26 |
| Bra010869.1-P | Field mustard | nucleus | 35.54 | 42.04 |
| CDX90154 | Canola | nucleus | 35.54 | 41.96 |
| KRH50116 | Soybean | nucleus | 40.23 | 41.92 |
| CDY22305 | Canola | nucleus | 36.94 | 41.85 |
| Bra033725.1-P | Field mustard | nucleus | 36.94 | 41.83 |
| VIT_10s0003g00270.t01 | Wine grape | nucleus | 24.99 | 41.39 |
| KRH55891 | Soybean | nucleus | 39.69 | 41.38 |
| CDX94760 | Canola | nucleus | 37.1 | 41.36 |
| AT1G28420.1 | Thale cress | nucleus | 37.7 | 41.06 |
| Bra032908.1-P | Field mustard | nucleus | 36.62 | 40.91 |
| Solyc02g077660.2.1 | Tomato | nucleus | 36.94 | 40.88 |
| CDY34099 | Canola | nucleus | 36.62 | 40.84 |
| CDY65661 | Canola | nucleus | 36.67 | 40.73 |
| HORVU3Hr1G020400.11 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 9.8 | 24.33 |
| HORVU2Hr1G021950.4 | Barley | nucleus, plastid | 14.11 | 22.05 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.3.7 | UniProt:A0A287GLN0 | ncoils:Coil | InterPro:DDT_dom | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:HB1/Asxl_HTH | EnsemblPlantsGene:HORVU1Hr1G087180 | EnsemblPlants:HORVU1Hr1G087180.1 | InterPro:Homeobox-like_sf |
| InterPro:Homeobox_dom | InterPro:IPR001356 | InterPro:IPR018501 | PFAM:PF00046 | PFAM:PF02791 | PFAM:PF05066 |
| PFAM:PF15612 | PFAM:PF15613 | PFscan:PS50071 | PFscan:PS50827 | PANTHER:PTHR36968 | SMART:SM00389 |
| SMART:SM00571 | SUPFAM:SSF46689 | UniParc:UPI000B48000C | InterPro:WHIM1_dom | InterPro:WHIM2_dom | SEG:seg |
Description
No Description!
Coordinates
chrchr1H:+:538876759..538890883
Molecular Weight (calculated)
205630.0 Da
IEP (calculated)
5.166
GRAVY (calculated)
-0.806
Length
1857 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDSSGDGGDE GPGAAPGSPA PASSSAPSAG PGGASGSSGK PTARRVMKTP YQLEVLEQTY TEDPYPNEAK RVELSAKLGL TDRQLQMWFC HRRLKDRRPP
0101: AKRQQQQQLD EEVAVPVMAP PPVLHHSLPH PHTEQLLPCS SSRRGPGRSS AVPRISAPEI DRRYYESHQI MLPPQAPVQL TRAAHRAIET VQQLIGEPLR
0201: EDGPVLGDHF DPLPPDAFGA PMPVVPEQRK QPYRSHETSV FSAHDPKPMK ASAFLPSIDP SVPSTVTGKR KYMAGNSSHL ARAVHEYQFL PEHSSDIYER
0301: TSQSCFYDAP TEASNSRISS LSTGSRLLHG ADKASTYAFD GQVSGSSHLN QHGKPLISLS GSTDYEMASS NIDASPAPIE GQFGVTQVVG FHNPLPSSEG
0401: VDYHDEDAYQ LDKKRKHNEE SKIAKEVDAQ EKRIRKELEK QDVLKKKREE QMRKEVERYD RERKKEEERF MREKQREEER LQKEQWREQK RMEKFLVKQS
0501: LRAEKLKQKE ELRKEKEAAR QKAANERATA RRIAREYMEL MEDERLELME LVSRSKGLPS MLSLDSDTLQ QLDSFRGMLT QFPTEAVRLK VPFSIKPWTS
0601: SESNIGNLLM VWKFFFTFAD VLELPSFTLD EFVQSLHDYD SRLLGELHVA VLKSIIKDIE DVARTSSVVS GVNQSSSANP GGGHPQIVEG AYAWGFNILI
0701: WQRHLTYLTW PEILRQFGLS AGFGPQLKKR NTEDAYHDDN EGRNCEDVIS TLRNGSAAVK SAALMKERGY TNRRRSRHRL TPGTVKFAAF HVLSLEGDEG
0801: LSILEVAEKI QRSGLRDLTT SKTPEASISA ALSRDTKLFE RTAPSTYCVK TPYRKDPADS EAVFSAAREK IRVFQNALSA CEEVEKDVED VERGDDDSEC
0901: DDADDDPDGD EVNIEEKDAN ASAVRAKDAG LPNAAGDIKD EVKSVVNLSM PSSPHSKSPS GLQCTVDKST AASTSSDPPI GASQDAEIDE SNQGESWVQG
1001: LAEGDYCDLS VEERLNALVA LIGVATEGNS MRAILEERLE AANALKKQMW VESQLDRRRS REEFTGRMQH DPCMDLKADA DEGNNVGECT PTLVQIKENG
1101: GKASSVNNDL LVDQQSQLNA GNMVHEGNGV SRESNANPES LSVQQYAPTE KTRSQLKSLI GHKAEQLYVY RSLPLGQDRR RNRYWQFSTS VSPNDPGSGR
1201: IFFESRDGYW RLIDSAEAFD ALVASLDTRG IRESHLHSML RSIEPTFKDA IGRKNDATIE HPAGRNLRNG SSEIISPNHS NEFGSPCSTL SGVVSDTAVA
1301: YSDSFKIELG RNDLEKVGIS KRACMFLKWM WECNNHQSTC AMKYGKKRCS ELIQCCDYCY QIYLTEEMHC SSCHKTFKSI QSLSEHTTQC EEKRRTDPNW
1401: KIQISDDSVP IRLRLLKVLL ATIEASVPAE ALQPFWTNGY RKSWGVKLFS TTSNEEAFQL LTVLEGALKR DYLSSNFETT AELLNSDTQD FADRSSIACS
1501: GSAAVLPWVP STAAAVTLRL LDLDSSLSYT PDQKAGLNKE REAGDFIKGP SRYTAVKNRQ EMEHVGAPGF DHHDGVQLIP SNGLRGRGRG GRGRGRGGRS
1601: LSRGGRVPRG VGSSPKIEFR DDNNVSYKEA TDKQAGRGRG RGRGRGRGRG RGRGRGSVSG SGSVRGRGRG RGRGLRTVRP RQPVELGARS IPKANLLGTF
1701: GMLSNAKPTA VHSPQSSGAE EWGLDRRVYA EDDENSSVSQ SDESEGDEEN GEPMNEDYDE QLPDYSRHNS GSSPLQMMDS ESEDNDEYDE EGEDDGADYD
1801: AEQPMDEDND DAEMSGDDEL GDDDDDDGDD DDGGGSQGGA GNADDDDATS YSSEYSE
0101: AKRQQQQQLD EEVAVPVMAP PPVLHHSLPH PHTEQLLPCS SSRRGPGRSS AVPRISAPEI DRRYYESHQI MLPPQAPVQL TRAAHRAIET VQQLIGEPLR
0201: EDGPVLGDHF DPLPPDAFGA PMPVVPEQRK QPYRSHETSV FSAHDPKPMK ASAFLPSIDP SVPSTVTGKR KYMAGNSSHL ARAVHEYQFL PEHSSDIYER
0301: TSQSCFYDAP TEASNSRISS LSTGSRLLHG ADKASTYAFD GQVSGSSHLN QHGKPLISLS GSTDYEMASS NIDASPAPIE GQFGVTQVVG FHNPLPSSEG
0401: VDYHDEDAYQ LDKKRKHNEE SKIAKEVDAQ EKRIRKELEK QDVLKKKREE QMRKEVERYD RERKKEEERF MREKQREEER LQKEQWREQK RMEKFLVKQS
0501: LRAEKLKQKE ELRKEKEAAR QKAANERATA RRIAREYMEL MEDERLELME LVSRSKGLPS MLSLDSDTLQ QLDSFRGMLT QFPTEAVRLK VPFSIKPWTS
0601: SESNIGNLLM VWKFFFTFAD VLELPSFTLD EFVQSLHDYD SRLLGELHVA VLKSIIKDIE DVARTSSVVS GVNQSSSANP GGGHPQIVEG AYAWGFNILI
0701: WQRHLTYLTW PEILRQFGLS AGFGPQLKKR NTEDAYHDDN EGRNCEDVIS TLRNGSAAVK SAALMKERGY TNRRRSRHRL TPGTVKFAAF HVLSLEGDEG
0801: LSILEVAEKI QRSGLRDLTT SKTPEASISA ALSRDTKLFE RTAPSTYCVK TPYRKDPADS EAVFSAAREK IRVFQNALSA CEEVEKDVED VERGDDDSEC
0901: DDADDDPDGD EVNIEEKDAN ASAVRAKDAG LPNAAGDIKD EVKSVVNLSM PSSPHSKSPS GLQCTVDKST AASTSSDPPI GASQDAEIDE SNQGESWVQG
1001: LAEGDYCDLS VEERLNALVA LIGVATEGNS MRAILEERLE AANALKKQMW VESQLDRRRS REEFTGRMQH DPCMDLKADA DEGNNVGECT PTLVQIKENG
1101: GKASSVNNDL LVDQQSQLNA GNMVHEGNGV SRESNANPES LSVQQYAPTE KTRSQLKSLI GHKAEQLYVY RSLPLGQDRR RNRYWQFSTS VSPNDPGSGR
1201: IFFESRDGYW RLIDSAEAFD ALVASLDTRG IRESHLHSML RSIEPTFKDA IGRKNDATIE HPAGRNLRNG SSEIISPNHS NEFGSPCSTL SGVVSDTAVA
1301: YSDSFKIELG RNDLEKVGIS KRACMFLKWM WECNNHQSTC AMKYGKKRCS ELIQCCDYCY QIYLTEEMHC SSCHKTFKSI QSLSEHTTQC EEKRRTDPNW
1401: KIQISDDSVP IRLRLLKVLL ATIEASVPAE ALQPFWTNGY RKSWGVKLFS TTSNEEAFQL LTVLEGALKR DYLSSNFETT AELLNSDTQD FADRSSIACS
1501: GSAAVLPWVP STAAAVTLRL LDLDSSLSYT PDQKAGLNKE REAGDFIKGP SRYTAVKNRQ EMEHVGAPGF DHHDGVQLIP SNGLRGRGRG GRGRGRGGRS
1601: LSRGGRVPRG VGSSPKIEFR DDNNVSYKEA TDKQAGRGRG RGRGRGRGRG RGRGRGSVSG SGSVRGRGRG RGRGLRTVRP RQPVELGARS IPKANLLGTF
1701: GMLSNAKPTA VHSPQSSGAE EWGLDRRVYA EDDENSSVSQ SDESEGDEEN GEPMNEDYDE QLPDYSRHNS GSSPLQMMDS ESEDNDEYDE EGEDDGADYD
1801: AEQPMDEDND DAEMSGDDEL GDDDDDDGDD DDGGGSQGGA GNADDDDATS YSSEYSE
0001: MEGGSEKTTP EGCGGESKSK RKMKTAAQLE VLENTYSAEP YPSEAIRADL SVKLNLSDRQ LQMWFCHRRL KERKSTTPSK RQRKELVTPT AMESWEPPVN
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
0101: AGDLVAGNEL DSRRAARGSG GSGVTVVRRF NEPSSAEVRA IGYVEAQLGE RLRDNGPVLG MEFDPLPPGA FGMPIEMPSH RKATRQAFET NIYVRSDVKP
0201: IKDHVRPIRE YQFIPELPSS RTDHSERVSP SHHFGVPLDG SVMRVSAVSA GHRDDYKISP QIPNLNLATH QGKPGHVYSP NLVEYDSPYQ KSYMDTAAQV
0301: HDDPFVKSER EVGNEDEDDD ALQLERHRKN EEARIAREVE AHEKRIRREL EKQDMLRRKR EEQIRKEMER QDRERRKEEE RLLREKQREE ERYLKEQMRE
0401: LQRREKFLKK ETIRAEKMRQ KEEMRKEKEV ARLKAANERA IARKIAKESM ELIEDERLEL MEVAALTKGL PSMLALDFET LQNLDEYRDK QAIFPPTSVK
0501: LKKPFAVKPW NGSDENVANL LMVWRFLITF ADVLGLWPFT LDEFAQAFHD YDPRLMGEIH IVLLKTIIKD IEGVVRTLST GVGANQNVAA NPGGGHPHVV
0601: EGAYAWGFDI RSWRKNLNVF TWPEILRQLA LSAGLGPQLK KMNIRTVSVH DDNEANNSEN VIFNLRKGVA AENAFAKMQE RGLSNPRRSR HRLTPGTVKF
0701: AAFHVLSLEG EKGLNILEVA EKIQKSGLRD LTTSRTPEAS VAAALSRDTK LFERVAPSTY CVRASYRKDA GDAETIFAEA RERIRAFKSG ITDVEDVDDA
0801: ERDEDSESDV GEDPEVDVNL KKEDPNPLKV ENLIGVEPLL ENGKLDTVPM KTELGLPLTP SLPEEMKDEK RDDTLADQSL EDAVANGEDS ACFDESKLGE
0901: QWVQGLVEGD YSNLSSEERL NALVALIGIA TEGNTIRIAL EERLEVASAL KKQMWGEVQL DKRWKEESLI RANYLSYPTA KPGLNIATPA SGNQESSSAD
1001: VTPISSQDPV SLPQIDVNNV IAGPSLQLQE NVPGVENLQY QQQQGYTADR ERLRAQLKAY VGYKAEELYV YRSLPLGQDR RRNRYWRFSA SASRNDPGCG
1101: RIFVELQDGR WRLIDSEEAF DYLVKSLDVR GVRESHLHFM LLKIEASFKE ALRRNVAANP GVCSISSSLD SDTAEISTTF KIELGDSNAV ERCSVLQRFH
1201: SFEKWMWDNM LHPSALSAFK YGAKQSSPLF RICRICAELH FVGDICCPSC GQMHAGPDVG ELCFAEQVAQ LGDNLRRGDT GFILRSSILS PLRIRLLKVQ
1301: LALVEASLPP EGLEAFWTEN LRKSWGMKLL SSSSHEDLYQ VLTTLEAALK RDFLSSNFET TSELLGLQEG ALASDLTCGV NVLPWIPKTA GGVALRLFDF
1401: DSSIVYTPDQ NNDPLKDKES EDFVGLETNI LRNLHEKDVM ETPVQVAAYK QEENWTDPGL GGVSSSGRGG RPPRGRGRPR ARGNGKKPAV SVKPPRGAAN
1501: SNGETMLRPR AQPRGGRKNG RRSGTKGRKR PTQGTLGICN EVGGGRRVKE VAVTAKTSLP DNDDDWIETP ELQDDDGEAS SSGRSFQYED YDDDDVMAPI
1601: DDFDGGGESS KLVGRGEFSL HSDDEYEEEE EEEEDMNMKM DVNVVDDEDE DYINEDSYGR KQHGISISND AATRKRFNKF EDPDLTSSSS SDFQ
Arabidopsis Description
RLT2Homeobox-DDT domain protein RLT2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.